RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 RABEP1Q15276 862 aa7.27□□□□□ -1.25
HNRNPU-208ENST00000475997 MEX3CQ5U5Q3 659 aaKnown RBP7.27□□□□□ -1.25
HNRNPU-208ENST00000475997 SYNE3Q6ZMZ3 975 aa7.27□□□□□ -1.25
HNRNPU-208ENST00000475997 GRPEL1Q9HAV7 217 aa7.27□□□□□ -1.25
HNRNPU-208ENST00000475997 ZBTB40Q9NUA8 1239 aa7.27□□□□□ -1.25
HNRNPU-208ENST00000475997 CCDC61Q9Y6R9 512 aa7.27□□□□□ -1.25
HNRNPU-208ENST00000475997 IL16Q14005 1332 aa7.27□□□□□ -1.25
HNRNPU-208ENST00000475997 RBM10P98175 930 aaKnown RBP7.27□□□□□ -1.25
HNRNPU-208ENST00000475997 SMC5Q8IY18 1101 aa7.27□□□□□ -1.25
HNRNPU-208ENST00000475997 MIS18AQ9NYP9 233 aa7.27□□□□□ -1.25
HNRNPU-208ENST00000475997 TRIM35Q9UPQ4 493 aa7.27□□□□□ -1.25
HNRNPU-208ENST00000475997 MYO5CQ9NQX4 1742 aa7.27□□□□□ -1.25
HNRNPU-208ENST00000475997 UGGT1Q9NYU2 1555 aa7.27□□□□□ -1.25
HNRNPU-208ENST00000475997 NUCB1Q02818 461 aa7.27□□□□□ -1.25
HNRNPU-208ENST00000475997 PHACTR3Q96KR7 559 aa7.27□□□□□ -1.25
HNRNPU-208ENST00000475997 EID1Q9Y6B2 187 aa7.27□□□□□ -1.25
HNRNPU-208ENST00000475997 MCM10Q7L590 875 aa7.27□□□□□ -1.25
HNRNPU-208ENST00000475997 TSPYL6Q8N831 410 aa7.27□□□□□ -1.25
HNRNPU-208ENST00000475997 A0A1W2PP64 1363 aa7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 EIF2S2P20042 333 aaKnown RBP7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 NUTM2GQ5VZR2 741 aa7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 TNPO1Q92973 898 aaKnown RBP7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 MBIPQ9NS73 344 aa7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 ATP7AQ04656 1500 aa7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 NEK4P51957 841 aa7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 BMP2KLQ5H9B9 411 aa7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 TBC1D9Q6ZT07 1266 aa7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 PDCL3Q9H2J4 239 aa7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 POLKQ9UBT6 870 aa7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 ESPNB1AK53 854 aa7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 SMARCA5O60264 1052 aaPredicted RBP7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 NAP1L1P55209 391 aaKnown RBP7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 ANKRD18AQ8IVF6 992 aa7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 SMARCE1Q969G3 411 aa7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 PUS7Q96PZ0 661 aaKnown RBP7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 ZRANB1Q9UGI0 708 aa7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 CIZ1Q9ULV3 898 aaPredicted RBP7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 CDC42BPBQ9Y5S2 1711 aa7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 TRIM5Q9C035 493 aa7.26□□□□□ -1.25
HNRNPU-208ENST00000475997 EZRP15311 586 aaKnown RBP7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 CT47A1Q5JQC4 288 aaPredicted RBP7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 OLFM4Q6UX06 510 aa7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 RBM42Q9BTD8 480 aaKnown RBP7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 SMC3Q9UQE7 1217 aa7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 UQCRHLA0A096LP55 91 aa7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 OFD1O75665 1012 aa7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 UQCRHP07919 91 aa7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 XRCC6P12956 609 aaKnown RBP eCLIP7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 ZNF692Q9BU19 519 aaPredicted RBP7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 PANK2Q9BZ23 570 aa7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 ZNF518AQ6AHZ1 1483 aa7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 VAMP4O75379 141 aa7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 PRPF40AO75400 957 aaKnown RBP7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 C8orf58Q8NAV2 365 aa7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 ODF2Q5BJF6 829 aa7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 TOMM22Q9NS69 142 aa7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 ERCC6L2Q5T890 1561 aa7.25□□□□□ -1.25
HNRNPU-208ENST00000475997 CPLX1O14810 134 aa7.24□□□□□ -1.25
HNRNPU-208ENST00000475997 NLRP6P59044 892 aa7.24□□□□□ -1.25
HNRNPU-208ENST00000475997 TXLNBQ8N3L3 684 aa7.24□□□□□ -1.25
HNRNPU-208ENST00000475997 GBP3Q9H0R5 595 aa7.24□□□□□ -1.25
HNRNPU-208ENST00000475997 IQGAP3Q86VI3 1631 aa7.24□□□□□ -1.25
HNRNPU-208ENST00000475997 KDM5AP29375 1690 aaKnown RBP7.24□□□□□ -1.25
HNRNPU-208ENST00000475997 SYNMO15061 1565 aa7.24□□□□□ -1.25
HNRNPU-208ENST00000475997 SBNO2Q9Y2G9 1366 aa7.24□□□□□ -1.25
HNRNPU-208ENST00000475997 KIF2AO00139 706 aaPredicted RBP7.24□□□□□ -1.25
HNRNPU-208ENST00000475997 WASLO00401 505 aaPredicted RBP7.24□□□□□ -1.25
HNRNPU-208ENST00000475997 SSFA2P28290 1259 aa7.24□□□□□ -1.25
HNRNPU-208ENST00000475997 PIP4K2AP48426 406 aaPredicted RBP7.24□□□□□ -1.25
HNRNPU-208ENST00000475997 RPAP2Q8IXW5 612 aaPredicted RBP7.24□□□□□ -1.25
HNRNPU-208ENST00000475997 TSPY26PQ9H489 355 aa7.24□□□□□ -1.25
HNRNPU-208ENST00000475997 DDX11Q96FC9 970 aa7.24□□□□□ -1.25
HNRNPU-208ENST00000475997 SLC26A8Q96RN1 970 aa7.24□□□□□ -1.25
HNRNPU-208ENST00000475997 TRPM2O94759 1503 aa7.24□□□□□ -1.25
HNRNPU-208ENST00000475997 MRPL50Q8N5N7 158 aaKnown RBP7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 LUC7LQ9NQ29 371 aaKnown RBP7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 EXOC6BQ9Y2D4 811 aa7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 F6X3S4 739 aa7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 FILIP1LQ4L180 1135 aa7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 IQCEQ6IPM2 695 aa7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 USP19O94966 1318 aa7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 VPS37CA5D8V6 355 aaPredicted RBP7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 C16orf71Q8IYS4 520 aaPredicted RBP7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 RNF214Q8ND24 703 aa7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 ABCC1P33527 1531 aa7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 ERC2O15083 957 aa7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 ZBTB7BO15156 539 aaPredicted RBP7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 GNAI2P04899 355 aa7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 MCM2P49736 904 aa7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 ARHGAP45Q92619 1136 aa7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 SDF4Q9BRK5 362 aa7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 UNC13BO14795 1591 aa7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 NPATQ14207 1427 aa7.23□□□□□ -1.25
HNRNPU-208ENST00000475997 SHTN1A0MZ66 631 aa7.22□□□□□ -1.25
HNRNPU-208ENST00000475997 KRT24Q2M2I5 525 aa7.22□□□□□ -1.25
HNRNPU-208ENST00000475997 HSP90AB2PQ58FF8 381 aa7.22□□□□□ -1.25
HNRNPU-208ENST00000475997 GNAI3P08754 354 aa7.22□□□□□ -1.25
HNRNPU-208ENST00000475997 SAFBQ15424 915 aaKnown RBP eCLIP7.22□□□□□ -1.25
HNRNPU-208ENST00000475997 NCKAP5LQ9HCH0 1330 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms