RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 AMPHP49418 695 aa15.76■□□□□ 0.11
NUDCD3-206ENST00000475952 MARCH10Q8NA82 808 aaPredicted RBP15.76■□□□□ 0.11
NUDCD3-206ENST00000475952 DOT1LQ8TEK3 1739 aa15.75■□□□□ 0.11
NUDCD3-206ENST00000475952 HOXC9P31274 260 aa15.75■□□□□ 0.11
NUDCD3-206ENST00000475952 STK32BQ9NY57 414 aa15.75■□□□□ 0.11
NUDCD3-206ENST00000475952 KIF24Q5T7B8 1368 aa15.75■□□□□ 0.11
NUDCD3-206ENST00000475952 COL24A1Q17RW2 1714 aa15.74■□□□□ 0.11
NUDCD3-206ENST00000475952 CGNL1Q0VF96 1302 aa15.74■□□□□ 0.11
NUDCD3-206ENST00000475952 EXOC5O00471 708 aa15.74■□□□□ 0.11
NUDCD3-206ENST00000475952 IL2RBP14784 551 aa15.74■□□□□ 0.11
NUDCD3-206ENST00000475952 SLC15A2Q16348 729 aa15.74■□□□□ 0.11
NUDCD3-206ENST00000475952 TXNRD1Q16881 649 aa15.74■□□□□ 0.11
NUDCD3-206ENST00000475952 IFFO2Q5TF58 517 aa15.74■□□□□ 0.11
NUDCD3-206ENST00000475952 MTFR1LQ9H019 292 aa15.74■□□□□ 0.11
NUDCD3-206ENST00000475952 QSER1Q2KHR3 1735 aa15.74■□□□□ 0.11
NUDCD3-206ENST00000475952 MAP3K5Q99683 1374 aa15.74■□□□□ 0.11
NUDCD3-206ENST00000475952 RRS1Q15050 365 aaKnown RBP15.73■□□□□ 0.11
NUDCD3-206ENST00000475952 LTV1Q96GA3 475 aaPredicted RBP15.73■□□□□ 0.11
NUDCD3-206ENST00000475952 CARD14Q9BXL6 1004 aa15.73■□□□□ 0.11
NUDCD3-206ENST00000475952 FLT4P35916 1363 aa15.73■□□□□ 0.11
NUDCD3-206ENST00000475952 FBLN1P23142 703 aa15.72■□□□□ 0.11
NUDCD3-206ENST00000475952 TUBGCP6Q96RT7 1819 aa15.72■□□□□ 0.11
NUDCD3-206ENST00000475952 PKD1L3Q7Z443 1732 aa15.71■□□□□ 0.1
NUDCD3-206ENST00000475952 INSRP06213 1382 aa15.7■□□□□ 0.1
NUDCD3-206ENST00000475952 ARXQ96QS3 562 aa15.69■□□□□ 0.1
NUDCD3-206ENST00000475952 NSD2O96028 1365 aa15.68■□□□□ 0.1
NUDCD3-206ENST00000475952 ITGB4P16144 1822 aa15.68■□□□□ 0.1
NUDCD3-206ENST00000475952 MEGF6O75095 1541 aa15.68■□□□□ 0.1
NUDCD3-206ENST00000475952 LY75O60449 1722 aa15.66■□□□□ 0.1
NUDCD3-206ENST00000475952 GIGYF1O75420 1035 aaPredicted RBP15.66■□□□□ 0.1
NUDCD3-206ENST00000475952 HSP90AB2PQ58FF8 381 aa15.65■□□□□ 0.1
NUDCD3-206ENST00000475952 PANK3Q9H999 370 aa15.65■□□□□ 0.1
NUDCD3-206ENST00000475952 EMILIN1Q9Y6C2 1016 aa15.65■□□□□ 0.1
NUDCD3-206ENST00000475952 GPR162Q16538 588 aa15.63■□□□□ 0.09
NUDCD3-206ENST00000475952 ZNF827Q17R98 1081 aa15.63■□□□□ 0.09
NUDCD3-206ENST00000475952 KIF7Q2M1P5 1343 aa15.63■□□□□ 0.09
NUDCD3-206ENST00000475952 VIRMAQ69YN4 1812 aaKnown RBP15.62■□□□□ 0.09
NUDCD3-206ENST00000475952 PPM1GO15355 546 aaPredicted RBP15.62■□□□□ 0.09
NUDCD3-206ENST00000475952 NBPF6Q5VWK0 638 aa15.62■□□□□ 0.09
NUDCD3-206ENST00000475952 RAPGEF4Q8WZA2 1011 aa15.62■□□□□ 0.09
NUDCD3-206ENST00000475952 NBPF4Q96M43 638 aa15.62■□□□□ 0.09
NUDCD3-206ENST00000475952 TOGARAM1Q9Y4F4 1720 aa15.62■□□□□ 0.09
NUDCD3-206ENST00000475952 NCAPD2Q15021 1401 aa15.61■□□□□ 0.09
NUDCD3-206ENST00000475952 USHBP1Q8N6Y0 703 aa15.61■□□□□ 0.09
NUDCD3-206ENST00000475952 DDX54Q8TDD1 881 aaKnown RBP15.61■□□□□ 0.09
NUDCD3-206ENST00000475952 ACSBG1Q96GR2 724 aa15.61■□□□□ 0.09
NUDCD3-206ENST00000475952 KNSTRNQ9Y448 316 aa15.61■□□□□ 0.09
NUDCD3-206ENST00000475952 WASHC2AQ641Q2 1341 aa15.61■□□□□ 0.09
NUDCD3-206ENST00000475952 TATP17735 454 aaPredicted RBP15.6■□□□□ 0.09
NUDCD3-206ENST00000475952 ZCRB1Q8TBF4 217 aaKnown RBP15.6■□□□□ 0.09
NUDCD3-206ENST00000475952 TAF1LQ8IZX4 1826 aa15.59■□□□□ 0.09
NUDCD3-206ENST00000475952 TNNT2P45379 298 aaPredicted RBP15.59■□□□□ 0.09
NUDCD3-206ENST00000475952 LRRC4BQ9NT99 713 aa15.59■□□□□ 0.09
NUDCD3-206ENST00000475952 POLKQ9UBT6 870 aa15.59■□□□□ 0.09
NUDCD3-206ENST00000475952 PCDH11XQ9BZA7 1347 aa15.58■□□□□ 0.08
NUDCD3-206ENST00000475952 PCDH11YQ9BZA8 1340 aa15.58■□□□□ 0.08
NUDCD3-206ENST00000475952 C5P01031 1676 aa15.57■□□□□ 0.08
NUDCD3-206ENST00000475952 MORC1Q86VD1 984 aa15.57■□□□□ 0.08
NUDCD3-206ENST00000475952 PELP1Q8IZL8 1130 aaKnown RBP15.57■□□□□ 0.08
NUDCD3-206ENST00000475952 KLHL34Q8N239 644 aa15.57■□□□□ 0.08
NUDCD3-206ENST00000475952 AKT1S1Q96B36 256 aa15.57■□□□□ 0.08
NUDCD3-206ENST00000475952 NLGN2Q8NFZ4 835 aa15.56■□□□□ 0.08
NUDCD3-206ENST00000475952 PNPLA7Q6ZV29 1317 aa15.55■□□□□ 0.08
NUDCD3-206ENST00000475952 SLC16A10Q8TF71 515 aa15.55■□□□□ 0.08
NUDCD3-206ENST00000475952 SYTL4Q96C24 671 aaPredicted RBP15.55■□□□□ 0.08
NUDCD3-206ENST00000475952 PLEKHG2Q9H7P9 1386 aa15.54■□□□□ 0.08
NUDCD3-206ENST00000475952 POLD1P28340 1107 aa15.54■□□□□ 0.08
NUDCD3-206ENST00000475952 EYA1Q99502 592 aa15.53■□□□□ 0.08
NUDCD3-206ENST00000475952 ATP10DQ9P241 1426 aa15.52■□□□□ 0.08
NUDCD3-206ENST00000475952 YBX3P16989 372 aaKnown RBP eCLIP15.52■□□□□ 0.08
NUDCD3-206ENST00000475952 EIF4A2Q14240 407 aaKnown RBP15.52■□□□□ 0.08
NUDCD3-206ENST00000475952 AMER1Q5JTC6 1135 aaPredicted RBP15.52■□□□□ 0.08
NUDCD3-206ENST00000475952 PRIM1P49642 420 aaKnown RBP15.51■□□□□ 0.07
NUDCD3-206ENST00000475952 SPG7Q9UQ90 795 aa15.51■□□□□ 0.07
NUDCD3-206ENST00000475952 SCN11AQ9UI33 1791 aa15.51■□□□□ 0.07
NUDCD3-206ENST00000475952 IGSF1Q8N6C5 1336 aa15.5■□□□□ 0.07
NUDCD3-206ENST00000475952 SLC27A3Q5K4L6 730 aa15.5■□□□□ 0.07
NUDCD3-206ENST00000475952 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.49■□□□□ 0.07
NUDCD3-206ENST00000475952 CYP27B1O15528 508 aa15.48■□□□□ 0.07
NUDCD3-206ENST00000475952 PER1O15534 1290 aaPredicted RBP15.48■□□□□ 0.07
NUDCD3-206ENST00000475952 ADCY9O60503 1353 aa15.48■□□□□ 0.07
NUDCD3-206ENST00000475952 NPC1L1Q9UHC9 1359 aa15.48■□□□□ 0.07
NUDCD3-206ENST00000475952 GRIN3BO60391 1043 aa15.47■□□□□ 0.07
NUDCD3-206ENST00000475952 KCNQ4P56696 695 aa15.47■□□□□ 0.07
NUDCD3-206ENST00000475952 TFCP2L1Q9NZI6 479 aa15.47■□□□□ 0.07
NUDCD3-206ENST00000475952 UBR3Q6ZT12 1888 aa15.46■□□□□ 0.07
NUDCD3-206ENST00000475952 CC2D1BQ5T0F9 858 aaKnown RBP15.46■□□□□ 0.07
NUDCD3-206ENST00000475952 C4BP0C0L5 1744 aa15.46■□□□□ 0.06
NUDCD3-206ENST00000475952 IFNL2Q8IZJ0 200 aa15.45■□□□□ 0.06
NUDCD3-206ENST00000475952 ZNF831Q5JPB2 1677 aa15.44■□□□□ 0.06
NUDCD3-206ENST00000475952 HSPA6P17066 643 aa15.44■□□□□ 0.06
NUDCD3-206ENST00000475952 MPRIPQ6WCQ1 1025 aa15.44■□□□□ 0.06
NUDCD3-206ENST00000475952 KDRP35968 1356 aa15.44■□□□□ 0.06
NUDCD3-206ENST00000475952 COL5A3P25940 1745 aaPredicted RBP15.43■□□□□ 0.06
NUDCD3-206ENST00000475952 PHKG2P15735 406 aa15.43■□□□□ 0.06
NUDCD3-206ENST00000475952 NKX1-1Q15270 411 aaPredicted RBP15.43■□□□□ 0.06
NUDCD3-206ENST00000475952 GPBP1L1Q9HC44 474 aaPredicted RBP15.43■□□□□ 0.06
NUDCD3-206ENST00000475952 CCNL1Q9UK58 526 aaPredicted RBP15.43■□□□□ 0.06
NUDCD3-206ENST00000475952 PALLDQ8WX93 1383 aa15.43■□□□□ 0.06
NUDCD3-206ENST00000475952 PCNTO95613 3336 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms