RNA–Protein interactions for RNA: ENST00000475531.1

TBC1D1-211, Transcript of TBC1 domain family member 1, humanhuman

TSL 3

Gene TBC1D1, Length 608 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-211ENST00000475531 RGPD1P0DJD0 1748 aa11.3□□□□□ -0.6
TBC1D1-211ENST00000475531 SHANK3Q9BYB0 1731 aa11.3□□□□□ -0.6
TBC1D1-211ENST00000475531 PPP2R1AP30153 589 aa11.3□□□□□ -0.6
TBC1D1-211ENST00000475531 BCL11BQ9C0K0 894 aaPredicted RBP11.3□□□□□ -0.6
TBC1D1-211ENST00000475531 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.3□□□□□ -0.6
TBC1D1-211ENST00000475531 TNS1Q9HBL0 1735 aaKnown RBP11.29□□□□□ -0.6
TBC1D1-211ENST00000475531 CYP27B1O15528 508 aa11.29□□□□□ -0.6
TBC1D1-211ENST00000475531 KCNQ2O43526 872 aa11.29□□□□□ -0.6
TBC1D1-211ENST00000475531 APBA3O96018 575 aa11.29□□□□□ -0.6
TBC1D1-211ENST00000475531 BAG6P46379 1132 aa11.29□□□□□ -0.6
TBC1D1-211ENST00000475531 EN1Q05925 392 aaPredicted RBP11.29□□□□□ -0.6
TBC1D1-211ENST00000475531 CAMKK2Q96RR4 588 aa11.29□□□□□ -0.6
TBC1D1-211ENST00000475531 ZNF316A6NFI3 1004 aaPredicted RBP11.28□□□□□ -0.6
TBC1D1-211ENST00000475531 PLSCR1O15162 318 aa11.28□□□□□ -0.6
TBC1D1-211ENST00000475531 DIAPH1O60610 1272 aaKnown RBP11.28□□□□□ -0.6
TBC1D1-211ENST00000475531 AEBP1Q8IUX7 1158 aa11.28□□□□□ -0.6
TBC1D1-211ENST00000475531 PARD3Q8TEW0 1356 aa11.28□□□□□ -0.6
TBC1D1-211ENST00000475531 NKX1-1Q15270 411 aaPredicted RBP11.27□□□□□ -0.61
TBC1D1-211ENST00000475531 EZH2Q15910 746 aaKnown RBP11.27□□□□□ -0.61
TBC1D1-211ENST00000475531 SULT6B1Q6IMI4 303 aa11.27□□□□□ -0.61
TBC1D1-211ENST00000475531 ACSBG1Q96GR2 724 aa11.27□□□□□ -0.61
TBC1D1-211ENST00000475531 KDRP35968 1356 aa11.27□□□□□ -0.61
TBC1D1-211ENST00000475531 COL3A1P02461 1466 aaPredicted RBP11.26□□□□□ -0.61
TBC1D1-211ENST00000475531 PROM2Q8N271 834 aa11.26□□□□□ -0.61
TBC1D1-211ENST00000475531 SPG7Q9UQ90 795 aa11.26□□□□□ -0.61
TBC1D1-211ENST00000475531 PLEKHG2Q9H7P9 1386 aa11.26□□□□□ -0.61
TBC1D1-211ENST00000475531 PKD1L3Q7Z443 1732 aa11.26□□□□□ -0.61
TBC1D1-211ENST00000475531 PRIM1P49642 420 aaKnown RBP11.25□□□□□ -0.61
TBC1D1-211ENST00000475531 RALBP1Q15311 655 aa11.25□□□□□ -0.61
TBC1D1-211ENST00000475531 PCDH11XQ9BZA7 1347 aa11.25□□□□□ -0.61
TBC1D1-211ENST00000475531 PCDH11YQ9BZA8 1340 aa11.25□□□□□ -0.61
TBC1D1-211ENST00000475531 HMOX1P09601 288 aa11.24□□□□□ -0.61
TBC1D1-211ENST00000475531 PHKG2P15735 406 aa11.24□□□□□ -0.61
TBC1D1-211ENST00000475531 AMOTQ4VCS5 1084 aa11.24□□□□□ -0.61
TBC1D1-211ENST00000475531 PLEKHO1Q53GL0 409 aaPredicted RBP11.24□□□□□ -0.61
TBC1D1-211ENST00000475531 IFNL2Q8IZJ0 200 aa11.24□□□□□ -0.61
TBC1D1-211ENST00000475531 NHSQ6T4R5 1651 aa11.24□□□□□ -0.61
TBC1D1-211ENST00000475531 CFAP53Q96M91 514 aa11.23□□□□□ -0.61
TBC1D1-211ENST00000475531 BTAF1O14981 1849 aa11.22□□□□□ -0.61
TBC1D1-211ENST00000475531 ITGB4P16144 1822 aa11.22□□□□□ -0.61
TBC1D1-211ENST00000475531 U2SURPO15042 1029 aaKnown RBP11.21□□□□□ -0.61
TBC1D1-211ENST00000475531 TXNRD1Q16881 649 aa11.21□□□□□ -0.61
TBC1D1-211ENST00000475531 PRKRIP1Q9H875 184 aaPredicted RBP11.21□□□□□ -0.61
TBC1D1-211ENST00000475531 RGPD3A6NKT7 1758 aaPredicted RBP11.21□□□□□ -0.62
TBC1D1-211ENST00000475531 RGPD4Q7Z3J3 1758 aa11.21□□□□□ -0.62
TBC1D1-211ENST00000475531 DOT1LQ8TEK3 1739 aa11.21□□□□□ -0.62
TBC1D1-211ENST00000475531 MTHFSDQ2M296 383 aaKnown RBP11.2□□□□□ -0.62
TBC1D1-211ENST00000475531 SYTL4Q96C24 671 aaPredicted RBP11.2□□□□□ -0.62
TBC1D1-211ENST00000475531 NUDCQ9Y266 331 aa11.2□□□□□ -0.62
TBC1D1-211ENST00000475531 RREB1Q92766 1687 aa11.2□□□□□ -0.62
TBC1D1-211ENST00000475531 TOGARAM1Q9Y4F4 1720 aa11.19□□□□□ -0.62
TBC1D1-211ENST00000475531 FCHSD2O94868 740 aa11.19□□□□□ -0.62
TBC1D1-211ENST00000475531 ZNF530Q6P9A1 599 aaPredicted RBP11.19□□□□□ -0.62
TBC1D1-211ENST00000475531 PIGBQ92521 554 aa11.19□□□□□ -0.62
TBC1D1-211ENST00000475531 RSPH6AQ9H0K4 717 aa11.19□□□□□ -0.62
TBC1D1-211ENST00000475531 MYBBP1AQ9BQG0 1328 aaKnown RBP11.18□□□□□ -0.62
TBC1D1-211ENST00000475531 ERVV-2B6SEH9 535 aa11.18□□□□□ -0.62
TBC1D1-211ENST00000475531 HSP90AB1P08238 724 aaKnown RBP11.18□□□□□ -0.62
TBC1D1-211ENST00000475531 U2AF1L5P0DN76 240 aaPredicted RBP11.18□□□□□ -0.62
TBC1D1-211ENST00000475531 U2AF1Q01081 240 aaKnown RBP eCLIP11.18□□□□□ -0.62
TBC1D1-211ENST00000475531 AKAP4Q5JQC9 854 aa11.18□□□□□ -0.62
TBC1D1-211ENST00000475531 MPRIPQ6WCQ1 1025 aa11.18□□□□□ -0.62
TBC1D1-211ENST00000475531 DCAF5Q96JK2 942 aa11.18□□□□□ -0.62
TBC1D1-211ENST00000475531 PHACTR3Q96KR7 559 aa11.18□□□□□ -0.62
TBC1D1-211ENST00000475531 LRRC4BQ9NT99 713 aa11.18□□□□□ -0.62
TBC1D1-211ENST00000475531 NUP188Q5SRE5 1749 aa11.18□□□□□ -0.62
TBC1D1-211ENST00000475531 PRKAR2BP31323 418 aa11.17□□□□□ -0.62
TBC1D1-211ENST00000475531 LGR6Q9HBX8 967 aa11.17□□□□□ -0.62
TBC1D1-211ENST00000475531 LY75O60449 1722 aa11.17□□□□□ -0.62
TBC1D1-211ENST00000475531 C1orf141Q5JVX7 400 aa11.16□□□□□ -0.62
TBC1D1-211ENST00000475531 NBPF14Q5TI25 921 aa11.16□□□□□ -0.62
TBC1D1-211ENST00000475531 KDM6AO15550 1401 aaPredicted RBP11.16□□□□□ -0.62
TBC1D1-211ENST00000475531 VIRMAQ69YN4 1812 aaKnown RBP11.16□□□□□ -0.62
TBC1D1-211ENST00000475531 SCN11AQ9UI33 1791 aa11.16□□□□□ -0.62
TBC1D1-211ENST00000475531 PSDA5PKW4 1024 aaPredicted RBP11.15□□□□□ -0.62
TBC1D1-211ENST00000475531 RNMTO43148 476 aaKnown RBP11.15□□□□□ -0.62
TBC1D1-211ENST00000475531 SLC27A3Q5K4L6 730 aa11.15□□□□□ -0.62
TBC1D1-211ENST00000475531 PLEKHF1Q96S99 279 aa11.15□□□□□ -0.62
TBC1D1-211ENST00000475531 ANO8Q9HCE9 1232 aaPredicted RBP11.15□□□□□ -0.62
TBC1D1-211ENST00000475531 ATG3Q9NT62 314 aa11.15□□□□□ -0.62
TBC1D1-211ENST00000475531 ASAP1Q9ULH1 1129 aa11.15□□□□□ -0.62
TBC1D1-211ENST00000475531 KCNQ4P56696 695 aa11.14□□□□□ -0.63
TBC1D1-211ENST00000475531 R3HDM1Q15032 1099 aaKnown RBP11.14□□□□□ -0.63
TBC1D1-211ENST00000475531 NFATC2IPQ8NCF5 419 aa11.14□□□□□ -0.63
TBC1D1-211ENST00000475531 IL17REQ8NFR9 667 aa11.14□□□□□ -0.63
TBC1D1-211ENST00000475531 GAS2L2Q8NHY3 880 aa11.14□□□□□ -0.63
TBC1D1-211ENST00000475531 SMARCC1Q92922 1105 aaPredicted RBP11.14□□□□□ -0.63
TBC1D1-211ENST00000475531 TMOD3Q9NYL9 352 aa11.14□□□□□ -0.63
TBC1D1-211ENST00000475531 CABP4P57796 275 aa11.13□□□□□ -0.63
TBC1D1-211ENST00000475531 ADAMTS7Q9UKP4 1686 aa11.13□□□□□ -0.63
TBC1D1-211ENST00000475531 GNAT3A8MTJ3 354 aa11.12□□□□□ -0.63
TBC1D1-211ENST00000475531 SLC15A2Q16348 729 aa11.12□□□□□ -0.63
TBC1D1-211ENST00000475531 CCDC184Q52MB2 194 aa11.12□□□□□ -0.63
TBC1D1-211ENST00000475531 AKT1S1Q96B36 256 aa11.12□□□□□ -0.63
TBC1D1-211ENST00000475531 SLC52A2Q9HAB3 445 aa11.12□□□□□ -0.63
TBC1D1-211ENST00000475531 PALLDQ8WX93 1383 aa11.12□□□□□ -0.63
TBC1D1-211ENST00000475531 PAPPAQ13219 1627 aa11.11□□□□□ -0.63
TBC1D1-211ENST00000475531 LOC102724428A0A0B4J2F2 783 aa11.11□□□□□ -0.63
TBC1D1-211ENST00000475531 SIK1P57059 783 aa11.11□□□□□ -0.63
TBC1D1-211ENST00000475531 SLC4A9Q96Q91 983 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms