RNA–Protein interactions for RNA: ENST00000475445.1

GGA1-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 2,614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-218ENST00000475445 STRCQ7RTU9 1775 aa18.01■□□□□ 0.47
GGA1-218ENST00000475445 XRN1Q8IZH2 1706 aaKnown RBP18.01■□□□□ 0.47
GGA1-218ENST00000475445 ARHGEF10O15013 1369 aa18.01■□□□□ 0.47
GGA1-218ENST00000475445 KIAA0232Q92628 1395 aa18.01■□□□□ 0.47
GGA1-218ENST00000475445 AEBP1Q8IUX7 1158 aa18.01■□□□□ 0.47
GGA1-218ENST00000475445 ELL2O00472 640 aaPredicted RBP18■□□□□ 0.47
GGA1-218ENST00000475445 C22orf23Q9BZE7 217 aa18■□□□□ 0.47
GGA1-218ENST00000475445 AMOTL2Q9Y2J4 779 aa18■□□□□ 0.47
GGA1-218ENST00000475445 RGPD8O14715 1765 aaPredicted RBP17.99■□□□□ 0.47
GGA1-218ENST00000475445 TBC1D2Q9BYX2 928 aa17.99■□□□□ 0.47
GGA1-218ENST00000475445 CHL1O00533 1208 aa17.98■□□□□ 0.47
GGA1-218ENST00000475445 HSPA2P54652 639 aa17.98■□□□□ 0.47
GGA1-218ENST00000475445 DCTN1Q14203 1278 aa17.98■□□□□ 0.47
GGA1-218ENST00000475445 LNPKQ9C0E8 428 aa17.98■□□□□ 0.47
GGA1-218ENST00000475445 FRAT2O75474 233 aaPredicted RBP17.98■□□□□ 0.47
GGA1-218ENST00000475445 SBNO1A3KN83 1393 aa17.98■□□□□ 0.47
GGA1-218ENST00000475445 MFAP1P55081 439 aaKnown RBP17.97■□□□□ 0.47
GGA1-218ENST00000475445 BMP2KLQ5H9B9 411 aa17.97■□□□□ 0.47
GGA1-218ENST00000475445 USP54Q70EL1 1684 aa17.97■□□□□ 0.47
GGA1-218ENST00000475445 NUTM2FA1L443 756 aa17.97■□□□□ 0.47
GGA1-218ENST00000475445 HSP90AB2PQ58FF8 381 aa17.97■□□□□ 0.47
GGA1-218ENST00000475445 ANTXR1Q9H6X2 564 aa17.97■□□□□ 0.47
GGA1-218ENST00000475445 FLT4P35916 1363 aa17.97■□□□□ 0.47
GGA1-218ENST00000475445 ANKARQ7Z5J8 1434 aa17.97■□□□□ 0.47
GGA1-218ENST00000475445 PIK3C2AO00443 1686 aa17.96■□□□□ 0.47
GGA1-218ENST00000475445 INTS3Q68E01 1043 aaKnown RBP17.95■□□□□ 0.46
GGA1-218ENST00000475445 CRB1P82279 1406 aa17.95■□□□□ 0.46
GGA1-218ENST00000475445 ANKRD45Q5TZF3 282 aa17.95■□□□□ 0.46
GGA1-218ENST00000475445 KDRP35968 1356 aa17.94■□□□□ 0.46
GGA1-218ENST00000475445 MAP3K19Q56UN5 1328 aa17.94■□□□□ 0.46
GGA1-218ENST00000475445 C1orf115Q9H7X2 142 aa17.94■□□□□ 0.46
GGA1-218ENST00000475445 SIRT2Q8IXJ6 389 aa17.94■□□□□ 0.46
GGA1-218ENST00000475445 RGS12O14924 1447 aa17.93■□□□□ 0.46
GGA1-218ENST00000475445 PTPRCP08575 1304 aa17.93■□□□□ 0.46
GGA1-218ENST00000475445 RBM25P49756 843 aaKnown RBP17.93■□□□□ 0.46
GGA1-218ENST00000475445 ANKLE2Q86XL3 938 aa17.93■□□□□ 0.46
GGA1-218ENST00000475445 NGDNQ8NEJ9 315 aaKnown RBP17.92■□□□□ 0.46
GGA1-218ENST00000475445 SLKQ9H2G2 1235 aaPredicted RBP17.92■□□□□ 0.46
GGA1-218ENST00000475445 MCM10Q7L590 875 aa17.92■□□□□ 0.46
GGA1-218ENST00000475445 MARF1Q9Y4F3 1742 aaKnown RBP17.91■□□□□ 0.46
GGA1-218ENST00000475445 BCL11BQ9C0K0 894 aaPredicted RBP17.91■□□□□ 0.46
GGA1-218ENST00000475445 IGSF1Q8N6C5 1336 aa17.91■□□□□ 0.46
GGA1-218ENST00000475445 LRRC37A3O60309 1634 aa17.9■□□□□ 0.46
GGA1-218ENST00000475445 HSP90AA1P07900 732 aaKnown RBP17.89■□□□□ 0.46
GGA1-218ENST00000475445 GAS2L2Q8NHY3 880 aa17.88■□□□□ 0.45
GGA1-218ENST00000475445 DCTPP1Q9H773 170 aa17.88■□□□□ 0.45
GGA1-218ENST00000475445 ATP10DQ9P241 1426 aa17.88■□□□□ 0.45
GGA1-218ENST00000475445 ANKRD44Q8N8A2 993 aa17.88■□□□□ 0.45
GGA1-218ENST00000475445 RTF1Q92541 710 aaKnown RBP17.88■□□□□ 0.45
GGA1-218ENST00000475445 AMPHP49418 695 aa17.87■□□□□ 0.45
GGA1-218ENST00000475445 HSCBQ8IWL3 235 aa17.87■□□□□ 0.45
GGA1-218ENST00000475445 RPAP2Q8IXW5 612 aaPredicted RBP17.87■□□□□ 0.45
GGA1-218ENST00000475445 SOX12O15370 315 aa17.87■□□□□ 0.45
GGA1-218ENST00000475445 HTATSF1O43719 755 aaKnown RBP17.87■□□□□ 0.45
GGA1-218ENST00000475445 MTHFSDQ2M296 383 aaKnown RBP17.87■□□□□ 0.45
GGA1-218ENST00000475445 KRT24Q2M2I5 525 aa17.87■□□□□ 0.45
GGA1-218ENST00000475445 SNX21Q969T3 373 aa17.87■□□□□ 0.45
GGA1-218ENST00000475445 EYA1Q99502 592 aa17.85■□□□□ 0.45
GGA1-218ENST00000475445 CHMP5Q9NZZ3 219 aa17.85■□□□□ 0.45
GGA1-218ENST00000475445 MSH6P52701 1360 aa17.85■□□□□ 0.45
GGA1-218ENST00000475445 NCOA3Q9Y6Q9 1424 aa17.85■□□□□ 0.45
GGA1-218ENST00000475445 TSPYL4Q9UJ04 414 aa17.84■□□□□ 0.45
GGA1-218ENST00000475445 RTL1A6NKG5 1358 aa17.84■□□□□ 0.45
GGA1-218ENST00000475445 CACNA1FO60840 1977 aa17.84■□□□□ 0.45
GGA1-218ENST00000475445 FAM208AQ9UK61 1670 aaKnown RBP17.83■□□□□ 0.45
GGA1-218ENST00000475445 NWD1Q149M9 1564 aa17.83■□□□□ 0.45
GGA1-218ENST00000475445 CDC45O75419 566 aa17.83■□□□□ 0.44
GGA1-218ENST00000475445 NLRP6P59044 892 aa17.83■□□□□ 0.44
GGA1-218ENST00000475445 TBC1D9Q6ZT07 1266 aa17.83■□□□□ 0.44
GGA1-218ENST00000475445 CHD2O14647 1828 aaKnown RBP17.83■□□□□ 0.44
GGA1-218ENST00000475445 KCNA6P17658 529 aa17.83■□□□□ 0.44
GGA1-218ENST00000475445 CEP85Q6P2H3 762 aa17.83■□□□□ 0.44
GGA1-218ENST00000475445 FOXO3O43524 673 aa17.82■□□□□ 0.44
GGA1-218ENST00000475445 PLEKHM2Q8IWE5 1019 aa17.82■□□□□ 0.44
GGA1-218ENST00000475445 SOS1Q07889 1333 aaPredicted RBP17.82■□□□□ 0.44
GGA1-218ENST00000475445 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
GGA1-218ENST00000475445 HOXC9P31274 260 aa17.81■□□□□ 0.44
GGA1-218ENST00000475445 N4BP2Q86UW6 1770 aaPredicted RBP17.81■□□□□ 0.44
GGA1-218ENST00000475445 CCT4P50991 539 aaKnown RBP17.81■□□□□ 0.44
GGA1-218ENST00000475445 NPHP4O75161 1426 aaPredicted RBP17.81■□□□□ 0.44
GGA1-218ENST00000475445 BABAM1Q9NWV8 329 aa17.8■□□□□ 0.44
GGA1-218ENST00000475445 TTC22Q5TAA0 569 aa17.79■□□□□ 0.44
GGA1-218ENST00000475445 LTN1O94822 1766 aa17.79■□□□□ 0.44
GGA1-218ENST00000475445 GSPT1P15170 499 aaKnown RBP17.79■□□□□ 0.44
GGA1-218ENST00000475445 MEIS3Q99687 375 aa17.79■□□□□ 0.44
GGA1-218ENST00000475445 GNAT3A8MTJ3 354 aa17.78■□□□□ 0.44
GGA1-218ENST00000475445 HMMRO75330 724 aa17.78■□□□□ 0.44
GGA1-218ENST00000475445 TAF7LQ5H9L4 462 aa17.78■□□□□ 0.44
GGA1-218ENST00000475445 MIS18AQ9NYP9 233 aa17.78■□□□□ 0.44
GGA1-218ENST00000475445 KIF2CQ99661 725 aa17.78■□□□□ 0.44
GGA1-218ENST00000475445 MAP3K5Q99683 1374 aa17.78■□□□□ 0.44
GGA1-218ENST00000475445 SPRYD3Q8NCJ5 442 aa17.77■□□□□ 0.44
GGA1-218ENST00000475445 STK31Q9BXU1 1019 aa17.77■□□□□ 0.44
GGA1-218ENST00000475445 MCM4P33991 863 aa17.77■□□□□ 0.43
GGA1-218ENST00000475445 DDIT3P35638 169 aa17.77■□□□□ 0.43
GGA1-218ENST00000475445 CIZ1Q9ULV3 898 aaPredicted RBP17.77■□□□□ 0.43
GGA1-218ENST00000475445 ABTB2Q8N961 1025 aa17.76■□□□□ 0.43
GGA1-218ENST00000475445 NAP1L5Q96NT1 182 aaPredicted RBP17.76■□□□□ 0.43
GGA1-218ENST00000475445 PRDM4Q9UKN5 801 aa17.76■□□□□ 0.43
GGA1-218ENST00000475445 CCDC30Q5VVM6 783 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 203.5 ms