RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 EVC2Q86UK5 1308 aa9.72□□□□□ -0.85
LSAMP-204ENST00000475403 LTN1O94822 1766 aa9.71□□□□□ -0.85
LSAMP-204ENST00000475403 TOMM70O94826 608 aa9.71□□□□□ -0.86
LSAMP-204ENST00000475403 COL13A1Q5TAT6 717 aaPredicted RBP9.71□□□□□ -0.86
LSAMP-204ENST00000475403 COL23A1Q86Y22 540 aaPredicted RBP9.71□□□□□ -0.86
LSAMP-204ENST00000475403 C16orf71Q8IYS4 520 aaPredicted RBP9.71□□□□□ -0.86
LSAMP-204ENST00000475403 ANKRD24Q8TF21 1146 aa9.71□□□□□ -0.86
LSAMP-204ENST00000475403 IGSF1Q8N6C5 1336 aa9.71□□□□□ -0.86
LSAMP-204ENST00000475403 USP47Q96K76 1375 aa9.71□□□□□ -0.86
LSAMP-204ENST00000475403 LY75O60449 1722 aa9.7□□□□□ -0.86
LSAMP-204ENST00000475403 WDR90Q96KV7 1748 aa9.7□□□□□ -0.86
LSAMP-204ENST00000475403 HMGB2P26583 209 aaKnown RBP9.7□□□□□ -0.86
LSAMP-204ENST00000475403 PRIM1P49642 420 aaKnown RBP9.7□□□□□ -0.86
LSAMP-204ENST00000475403 PRELPP51888 382 aa9.7□□□□□ -0.86
LSAMP-204ENST00000475403 CLSPNQ9HAW4 1339 aa9.7□□□□□ -0.86
LSAMP-204ENST00000475403 KTN1Q86UP2 1357 aaKnown RBP9.7□□□□□ -0.86
LSAMP-204ENST00000475403 ANKRD36BQ8N2N9 1353 aa9.7□□□□□ -0.86
LSAMP-204ENST00000475403 RAB3GAP2Q9H2M9 1393 aa9.7□□□□□ -0.86
LSAMP-204ENST00000475403 NBPF1Q3BBV0 1214 aa9.69□□□□□ -0.86
LSAMP-204ENST00000475403 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.69□□□□□ -0.86
LSAMP-204ENST00000475403 FLAD1Q8NFF5 587 aa9.69□□□□□ -0.86
LSAMP-204ENST00000475403 C5P01031 1676 aa9.68□□□□□ -0.86
LSAMP-204ENST00000475403 DNAJC5GQ8N7S2 189 aa9.68□□□□□ -0.86
LSAMP-204ENST00000475403 KLRG1Q96E93 195 aa9.68□□□□□ -0.86
LSAMP-204ENST00000475403 FAM208AQ9UK61 1670 aaKnown RBP9.67□□□□□ -0.86
LSAMP-204ENST00000475403 LTV1Q96GA3 475 aaPredicted RBP9.67□□□□□ -0.86
LSAMP-204ENST00000475403 AK7Q96M32 723 aa9.67□□□□□ -0.86
LSAMP-204ENST00000475403 PHF14O94880 888 aa9.66□□□□□ -0.86
LSAMP-204ENST00000475403 NSD3Q9BZ95 1437 aa9.65□□□□□ -0.86
LSAMP-204ENST00000475403 MON2Q7Z3U7 1717 aa9.65□□□□□ -0.86
LSAMP-204ENST00000475403 NSD2O96028 1365 aa9.65□□□□□ -0.86
LSAMP-204ENST00000475403 HTRA3P83110 453 aa9.65□□□□□ -0.86
LSAMP-204ENST00000475403 RBM46Q8TBY0 533 aaKnown RBP9.65□□□□□ -0.86
LSAMP-204ENST00000475403 CICQ96RK0 1608 aaPredicted RBP9.64□□□□□ -0.87
LSAMP-204ENST00000475403 NME9Q86XW9 330 aa9.64□□□□□ -0.87
LSAMP-204ENST00000475403 JMYQ8N9B5 988 aa9.64□□□□□ -0.87
LSAMP-204ENST00000475403 ZCRB1Q8TBF4 217 aaKnown RBP9.64□□□□□ -0.87
LSAMP-204ENST00000475403 NMRK2Q9NPI5 230 aa9.64□□□□□ -0.87
LSAMP-204ENST00000475403 USP54Q70EL1 1684 aa9.64□□□□□ -0.87
LSAMP-204ENST00000475403 USP31Q70CQ4 1352 aa9.63□□□□□ -0.87
LSAMP-204ENST00000475403 BCS1LQ9Y276 419 aa9.63□□□□□ -0.87
LSAMP-204ENST00000475403 PALLDQ8WX93 1383 aa9.63□□□□□ -0.87
LSAMP-204ENST00000475403 FSTL1Q12841 308 aa9.62□□□□□ -0.87
LSAMP-204ENST00000475403 ARHGAP27Q6ZUM4 889 aa9.62□□□□□ -0.87
LSAMP-204ENST00000475403 HDGFL2Q7Z4V5 671 aaPredicted RBP9.62□□□□□ -0.87
LSAMP-204ENST00000475403 BCL11AQ9H165 835 aa9.62□□□□□ -0.87
LSAMP-204ENST00000475403 PCNTO95613 3336 aa9.62□□□□□ -0.87
LSAMP-204ENST00000475403 C4BP0C0L5 1744 aa9.62□□□□□ -0.87
LSAMP-204ENST00000475403 PLEKHG2Q9H7P9 1386 aa9.62□□□□□ -0.87
LSAMP-204ENST00000475403 TAF1LQ8IZX4 1826 aa9.61□□□□□ -0.87
LSAMP-204ENST00000475403 TMC1Q8TDI8 760 aa9.61□□□□□ -0.87
LSAMP-204ENST00000475403 IP6K1Q92551 441 aa9.61□□□□□ -0.87
LSAMP-204ENST00000475403 KDM2BQ8NHM5 1336 aa9.6□□□□□ -0.87
LSAMP-204ENST00000475403 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.6□□□□□ -0.87
LSAMP-204ENST00000475403 HSPA1AP0DMV8 641 aaKnown RBP9.6□□□□□ -0.87
LSAMP-204ENST00000475403 HSPA1BP0DMV9 641 aaKnown RBP9.6□□□□□ -0.87
LSAMP-204ENST00000475403 AMPHP49418 695 aa9.6□□□□□ -0.87
LSAMP-204ENST00000475403 MPRIPQ6WCQ1 1025 aa9.6□□□□□ -0.87
LSAMP-204ENST00000475403 RAPGEF4Q8WZA2 1011 aa9.6□□□□□ -0.87
LSAMP-204ENST00000475403 MEGF6O75095 1541 aa9.6□□□□□ -0.87
LSAMP-204ENST00000475403 SMG6Q86US8 1419 aaKnown RBP9.59□□□□□ -0.87
LSAMP-204ENST00000475403 SSFA2P28290 1259 aa9.59□□□□□ -0.87
LSAMP-204ENST00000475403 SMARCC1Q92922 1105 aaPredicted RBP9.59□□□□□ -0.87
LSAMP-204ENST00000475403 ROCK2O75116 1388 aaKnown RBP9.59□□□□□ -0.87
LSAMP-204ENST00000475403 UBR3Q6ZT12 1888 aa9.59□□□□□ -0.87
LSAMP-204ENST00000475403 SBNO2Q9Y2G9 1366 aa9.59□□□□□ -0.87
LSAMP-204ENST00000475403 PXDNLA1KZ92 1463 aa9.59□□□□□ -0.87
LSAMP-204ENST00000475403 CGNL1Q0VF96 1302 aa9.58□□□□□ -0.88
LSAMP-204ENST00000475403 PCDH11XQ9BZA7 1347 aa9.58□□□□□ -0.88
LSAMP-204ENST00000475403 PCDH11YQ9BZA8 1340 aa9.58□□□□□ -0.88
LSAMP-204ENST00000475403 EDC4Q6P2E9 1401 aaKnown RBP9.58□□□□□ -0.88
LSAMP-204ENST00000475403 N4BP2Q86UW6 1770 aaPredicted RBP9.58□□□□□ -0.88
LSAMP-204ENST00000475403 FCHSD2O94868 740 aa9.58□□□□□ -0.88
LSAMP-204ENST00000475403 MMP10P09238 476 aa9.58□□□□□ -0.88
LSAMP-204ENST00000475403 C9orf131Q5VYM1 1079 aa9.58□□□□□ -0.88
LSAMP-204ENST00000475403 SMC1BQ8NDV3 1235 aa9.58□□□□□ -0.88
LSAMP-204ENST00000475403 TOGARAM1Q9Y4F4 1720 aa9.58□□□□□ -0.88
LSAMP-204ENST00000475403 RGPD2P0DJD1 1756 aa9.58□□□□□ -0.88
LSAMP-204ENST00000475403 KCPQ6ZWJ8 1503 aa9.57□□□□□ -0.88
LSAMP-204ENST00000475403 PKD1L3Q7Z443 1732 aa9.57□□□□□ -0.88
LSAMP-204ENST00000475403 TATP17735 454 aaPredicted RBP9.57□□□□□ -0.88
LSAMP-204ENST00000475403 TGFB2P61812 414 aa9.57□□□□□ -0.88
LSAMP-204ENST00000475403 TERF2IPQ9NYB0 399 aa9.57□□□□□ -0.88
LSAMP-204ENST00000475403 TNRC6CQ9HCJ0 1690 aaKnown RBP9.57□□□□□ -0.88
LSAMP-204ENST00000475403 A0A0G2JLW4 131 aa9.56□□□□□ -0.88
LSAMP-204ENST00000475403 GNPATO15228 680 aa9.56□□□□□ -0.88
LSAMP-204ENST00000475403 SLC34A2O95436 690 aa9.56□□□□□ -0.88
LSAMP-204ENST00000475403 HOXC9P31274 260 aa9.56□□□□□ -0.88
LSAMP-204ENST00000475403 SMIM5Q71RC9 77 aa9.56□□□□□ -0.88
LSAMP-204ENST00000475403 AMIGO3Q86WK7 504 aa9.56□□□□□ -0.88
LSAMP-204ENST00000475403 USHBP1Q8N6Y0 703 aa9.56□□□□□ -0.88
LSAMP-204ENST00000475403 COG3Q96JB2 828 aa9.56□□□□□ -0.88
LSAMP-204ENST00000475403 KIF13BQ9NQT8 1826 aa9.55□□□□□ -0.88
LSAMP-204ENST00000475403 RRAGCQ9HB90 399 aa9.55□□□□□ -0.88
LSAMP-204ENST00000475403 CCDC87Q9NVE4 849 aa9.55□□□□□ -0.88
LSAMP-204ENST00000475403 RNF181Q9P0P0 153 aa9.55□□□□□ -0.88
LSAMP-204ENST00000475403 MAP3K19Q56UN5 1328 aa9.55□□□□□ -0.88
LSAMP-204ENST00000475403 CD163L1Q9NR16 1453 aa9.54□□□□□ -0.88
LSAMP-204ENST00000475403 A0A1W2PP64 1363 aa9.54□□□□□ -0.88
LSAMP-204ENST00000475403 RTL1A6NKG5 1358 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms