RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 TRMT2AQ8IZ69 625 aaKnown RBP12.83□□□□□ -0.36
ITGA6-210ENST00000475302 NGEFQ8N5V2 710 aa12.83□□□□□ -0.36
ITGA6-210ENST00000475302 COG3Q96JB2 828 aa12.83□□□□□ -0.36
ITGA6-210ENST00000475302 PLEKHF1Q96S99 279 aa12.83□□□□□ -0.36
ITGA6-210ENST00000475302 APAF1O14727 1248 aa12.82□□□□□ -0.36
ITGA6-210ENST00000475302 CCDC146Q8IYE0 955 aa12.82□□□□□ -0.36
ITGA6-210ENST00000475302 CDCA7LQ96GN5 454 aa12.82□□□□□ -0.36
ITGA6-210ENST00000475302 C19orf44Q9H6X5 657 aa12.82□□□□□ -0.36
ITGA6-210ENST00000475302 IL13P35225 146 aa12.81□□□□□ -0.36
ITGA6-210ENST00000475302 NGDNQ8NEJ9 315 aaKnown RBP12.81□□□□□ -0.36
ITGA6-210ENST00000475302 RUNDC1Q96C34 613 aa12.81□□□□□ -0.36
ITGA6-210ENST00000475302 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.81□□□□□ -0.36
ITGA6-210ENST00000475302 EMILIN1Q9Y6C2 1016 aa12.81□□□□□ -0.36
ITGA6-210ENST00000475302 TMEM94Q12767 1356 aa12.81□□□□□ -0.36
ITGA6-210ENST00000475302 DCCP43146 1447 aa12.8□□□□□ -0.36
ITGA6-210ENST00000475302 C1orf167Q5SNV9 1468 aa12.8□□□□□ -0.36
ITGA6-210ENST00000475302 PEAK1Q9H792 1746 aa12.8□□□□□ -0.36
ITGA6-210ENST00000475302 DIAPH1O60610 1272 aaKnown RBP12.8□□□□□ -0.36
ITGA6-210ENST00000475302 TMC2Q8TDI7 906 aa12.8□□□□□ -0.36
ITGA6-210ENST00000475302 SUPT16HQ9Y5B9 1047 aaKnown RBP12.8□□□□□ -0.36
ITGA6-210ENST00000475302 XIRP1Q702N8 1843 aaKnown RBP12.8□□□□□ -0.36
ITGA6-210ENST00000475302 MST1RQ04912 1400 aa12.79□□□□□ -0.36
ITGA6-210ENST00000475302 SLFN5Q08AF3 891 aa12.78□□□□□ -0.36
ITGA6-210ENST00000475302 DOK7Q18PE1 504 aa12.78□□□□□ -0.36
ITGA6-210ENST00000475302 CCDC27Q2M243 656 aa12.78□□□□□ -0.36
ITGA6-210ENST00000475302 MARVELD3Q96A59 401 aa12.78□□□□□ -0.36
ITGA6-210ENST00000475302 ORAI2Q96SN7 254 aa12.78□□□□□ -0.36
ITGA6-210ENST00000475302 SALL2Q9Y467 1007 aaPredicted RBP12.78□□□□□ -0.36
ITGA6-210ENST00000475302 U2AF1L5P0DN76 240 aaPredicted RBP12.77□□□□□ -0.37
ITGA6-210ENST00000475302 U2AF1Q01081 240 aaKnown RBP eCLIP12.77□□□□□ -0.37
ITGA6-210ENST00000475302 RRS1Q15050 365 aaKnown RBP12.77□□□□□ -0.37
ITGA6-210ENST00000475302 TCP11L2Q8N4U5 519 aa12.77□□□□□ -0.37
ITGA6-210ENST00000475302 RGPD1P0DJD0 1748 aa12.76□□□□□ -0.37
ITGA6-210ENST00000475302 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
ITGA6-210ENST00000475302 FCHSD2O94868 740 aa12.76□□□□□ -0.37
ITGA6-210ENST00000475302 DUSP27Q5VZP5 1158 aa12.76□□□□□ -0.37
ITGA6-210ENST00000475302 WWC1Q8IX03 1113 aa12.76□□□□□ -0.37
ITGA6-210ENST00000475302 RSPH6AQ9H0K4 717 aa12.76□□□□□ -0.37
ITGA6-210ENST00000475302 KIF1AQ12756 1690 aa12.76□□□□□ -0.37
ITGA6-210ENST00000475302 ESCO1Q5FWF5 840 aa12.75□□□□□ -0.37
ITGA6-210ENST00000475302 ZNF710Q8N1W2 664 aa12.75□□□□□ -0.37
ITGA6-210ENST00000475302 KIF24Q5T7B8 1368 aa12.74□□□□□ -0.37
ITGA6-210ENST00000475302 MAP3K19Q56UN5 1328 aa12.74□□□□□ -0.37
ITGA6-210ENST00000475302 NFAT5O94916 1531 aa12.73□□□□□ -0.37
ITGA6-210ENST00000475302 EIF4A2Q14240 407 aaKnown RBP12.73□□□□□ -0.37
ITGA6-210ENST00000475302 C14orf37Q86TY3 774 aa12.73□□□□□ -0.37
ITGA6-210ENST00000475302 GPHNQ9NQX3 736 aaPredicted RBP12.73□□□□□ -0.37
ITGA6-210ENST00000475302 SLIT3O75094 1523 aa12.72□□□□□ -0.37
ITGA6-210ENST00000475302 SBNO1A3KN83 1393 aa12.72□□□□□ -0.37
ITGA6-210ENST00000475302 U2SURPO15042 1029 aaKnown RBP12.72□□□□□ -0.37
ITGA6-210ENST00000475302 TMPOP42166 694 aaKnown RBP12.72□□□□□ -0.37
ITGA6-210ENST00000475302 HSP90AB2PQ58FF8 381 aa12.72□□□□□ -0.37
ITGA6-210ENST00000475302 CADPS2Q86UW7 1296 aa12.72□□□□□ -0.37
ITGA6-210ENST00000475302 WDR63Q8IWG1 891 aa12.72□□□□□ -0.37
ITGA6-210ENST00000475302 SPRYD3Q8NCJ5 442 aa12.72□□□□□ -0.37
ITGA6-210ENST00000475302 ZNF335Q9H4Z2 1342 aaPredicted RBP12.71□□□□□ -0.37
ITGA6-210ENST00000475302 PHRF1Q9P1Y6 1649 aaKnown RBP12.71□□□□□ -0.37
ITGA6-210ENST00000475302 PPM1GO15355 546 aaPredicted RBP12.71□□□□□ -0.37
ITGA6-210ENST00000475302 FOXO3O43524 673 aa12.71□□□□□ -0.37
ITGA6-210ENST00000475302 PSME1Q06323 249 aa12.71□□□□□ -0.37
ITGA6-210ENST00000475302 DSG2Q14126 1118 aa12.71□□□□□ -0.37
ITGA6-210ENST00000475302 ERICH6BQ5W0A0 696 aa12.71□□□□□ -0.37
ITGA6-210ENST00000475302 PAXIP1Q6ZW49 1069 aaPredicted RBP12.71□□□□□ -0.37
ITGA6-210ENST00000475302 ABTB2Q8N961 1025 aa12.71□□□□□ -0.37
ITGA6-210ENST00000475302 CRISPLD2Q9H0B8 497 aa12.71□□□□□ -0.37
ITGA6-210ENST00000475302 ALS2Q96Q42 1657 aa12.7□□□□□ -0.38
ITGA6-210ENST00000475302 FLT4P35916 1363 aa12.7□□□□□ -0.38
ITGA6-210ENST00000475302 USP19O94966 1318 aa12.7□□□□□ -0.38
ITGA6-210ENST00000475302 E9PSI1 815 aa12.7□□□□□ -0.38
ITGA6-210ENST00000475302 PHACTR3Q96KR7 559 aa12.7□□□□□ -0.38
ITGA6-210ENST00000475302 CFAP44Q96MT7 982 aa12.7□□□□□ -0.38
ITGA6-210ENST00000475302 RCAN3Q9UKA8 241 aa12.7□□□□□ -0.38
ITGA6-210ENST00000475302 RRP7AQ9Y3A4 280 aaKnown RBP12.7□□□□□ -0.38
ITGA6-210ENST00000475302 HOXB1P14653 301 aaPredicted RBP12.69□□□□□ -0.38
ITGA6-210ENST00000475302 ATF3P18847 181 aa12.69□□□□□ -0.38
ITGA6-210ENST00000475302 PRKAR2BP31323 418 aa12.69□□□□□ -0.38
ITGA6-210ENST00000475302 FOXK1P85037 733 aa12.69□□□□□ -0.38
ITGA6-210ENST00000475302 KRT28Q7Z3Y7 464 aa12.69□□□□□ -0.38
ITGA6-210ENST00000475302 PNNQ9H307 717 aaKnown RBP12.69□□□□□ -0.38
ITGA6-210ENST00000475302 KDRP35968 1356 aa12.69□□□□□ -0.38
ITGA6-210ENST00000475302 MSH6P52701 1360 aa12.69□□□□□ -0.38
ITGA6-210ENST00000475302 PXDNQ92626 1479 aa12.68□□□□□ -0.38
ITGA6-210ENST00000475302 RIMBP2O15034 1052 aa12.68□□□□□ -0.38
ITGA6-210ENST00000475302 EMP3P54852 163 aa12.68□□□□□ -0.38
ITGA6-210ENST00000475302 NUTM2GQ5VZR2 741 aa12.68□□□□□ -0.38
ITGA6-210ENST00000475302 PLPP6Q8IY26 295 aa12.68□□□□□ -0.38
ITGA6-210ENST00000475302 RTL1A6NKG5 1358 aa12.68□□□□□ -0.38
ITGA6-210ENST00000475302 HOXC9P31274 260 aa12.67□□□□□ -0.38
ITGA6-210ENST00000475302 GPR153Q6NV75 609 aa12.67□□□□□ -0.38
ITGA6-210ENST00000475302 KHSRPQ92945 711 aaKnown RBP eCLIP12.67□□□□□ -0.38
ITGA6-210ENST00000475302 ARHGEF10O15013 1369 aa12.67□□□□□ -0.38
ITGA6-210ENST00000475302 IL16Q14005 1332 aa12.66□□□□□ -0.38
ITGA6-210ENST00000475302 IGSF1Q8N6C5 1336 aa12.66□□□□□ -0.38
ITGA6-210ENST00000475302 MED1Q15648 1581 aaPredicted RBP12.66□□□□□ -0.38
ITGA6-210ENST00000475302 NEFLP07196 543 aa12.66□□□□□ -0.38
ITGA6-210ENST00000475302 HMOX1P09601 288 aa12.66□□□□□ -0.38
ITGA6-210ENST00000475302 ARSIQ5FYB1 569 aa12.66□□□□□ -0.38
ITGA6-210ENST00000475302 AEBP1Q8IUX7 1158 aa12.66□□□□□ -0.38
ITGA6-210ENST00000475302 RRP1P56182 461 aaKnown RBP12.65□□□□□ -0.38
ITGA6-210ENST00000475302 RIPK4P57078 832 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms