RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 RTL1A6NKG5 1358 aa17■□□□□ 0.31
SSR1-205ENST00000475213 RGPD3A6NKT7 1758 aaPredicted RBP17■□□□□ 0.31
SSR1-205ENST00000475213 RGPD4Q7Z3J3 1758 aa17■□□□□ 0.31
SSR1-205ENST00000475213 R3HDM1Q15032 1099 aaKnown RBP16.99■□□□□ 0.31
SSR1-205ENST00000475213 POLR3GLQ9BT43 218 aa16.99■□□□□ 0.31
SSR1-205ENST00000475213 PLSCR1O15162 318 aa16.97■□□□□ 0.31
SSR1-205ENST00000475213 POLA2Q14181 598 aa16.97■□□□□ 0.31
SSR1-205ENST00000475213 LRP5O75197 1615 aa16.96■□□□□ 0.31
SSR1-205ENST00000475213 NHSQ6T4R5 1651 aa16.95■□□□□ 0.3
SSR1-205ENST00000475213 MAP2P11137 1827 aaKnown RBP16.95■□□□□ 0.3
SSR1-205ENST00000475213 KCNQ2O43526 872 aa16.94■□□□□ 0.3
SSR1-205ENST00000475213 CGNL1Q0VF96 1302 aa16.94■□□□□ 0.3
SSR1-205ENST00000475213 FLT4P35916 1363 aa16.93■□□□□ 0.3
SSR1-205ENST00000475213 HSP90AB2PQ58FF8 381 aa16.93■□□□□ 0.3
SSR1-205ENST00000475213 NBPF14Q5TI25 921 aa16.93■□□□□ 0.3
SSR1-205ENST00000475213 NBPF6Q5VWK0 638 aa16.93■□□□□ 0.3
SSR1-205ENST00000475213 ACSBG1Q96GR2 724 aa16.93■□□□□ 0.3
SSR1-205ENST00000475213 NBPF4Q96M43 638 aa16.93■□□□□ 0.3
SSR1-205ENST00000475213 INSRP06213 1382 aa16.92■□□□□ 0.3
SSR1-205ENST00000475213 KIF24Q5T7B8 1368 aa16.92■□□□□ 0.3
SSR1-205ENST00000475213 PROM2Q8N271 834 aa16.92■□□□□ 0.3
SSR1-205ENST00000475213 EMILIN1Q9Y6C2 1016 aa16.92■□□□□ 0.3
SSR1-205ENST00000475213 SMG6Q86US8 1419 aaKnown RBP16.92■□□□□ 0.3
SSR1-205ENST00000475213 SHANK3Q9BYB0 1731 aa16.92■□□□□ 0.3
SSR1-205ENST00000475213 ANKRD26Q9UPS8 1709 aa16.92■□□□□ 0.3
SSR1-205ENST00000475213 MEGF6O75095 1541 aa16.91■□□□□ 0.3
SSR1-205ENST00000475213 DDX54Q8TDD1 881 aaKnown RBP16.91■□□□□ 0.3
SSR1-205ENST00000475213 BTAF1O14981 1849 aa16.91■□□□□ 0.3
SSR1-205ENST00000475213 USHBP1Q8N6Y0 703 aa16.9■□□□□ 0.3
SSR1-205ENST00000475213 PANK3Q9H999 370 aa16.9■□□□□ 0.3
SSR1-205ENST00000475213 TXNRD1Q16881 649 aa16.88■□□□□ 0.29
SSR1-205ENST00000475213 ZCRB1Q8TBF4 217 aaKnown RBP16.88■□□□□ 0.29
SSR1-205ENST00000475213 PPM1GO15355 546 aaPredicted RBP16.87■□□□□ 0.29
SSR1-205ENST00000475213 ANO8Q9HCE9 1232 aaPredicted RBP16.87■□□□□ 0.29
SSR1-205ENST00000475213 RAPGEF4Q8WZA2 1011 aa16.86■□□□□ 0.29
SSR1-205ENST00000475213 POLKQ9UBT6 870 aa16.86■□□□□ 0.29
SSR1-205ENST00000475213 DOT1LQ8TEK3 1739 aa16.86■□□□□ 0.29
SSR1-205ENST00000475213 WASHC2AQ641Q2 1341 aa16.85■□□□□ 0.29
SSR1-205ENST00000475213 TATP17735 454 aaPredicted RBP16.84■□□□□ 0.29
SSR1-205ENST00000475213 TNNT2P45379 298 aaPredicted RBP16.84■□□□□ 0.29
SSR1-205ENST00000475213 CASZ1Q86V15 1759 aa16.83■□□□□ 0.28
SSR1-205ENST00000475213 NCAPD2Q15021 1401 aa16.82■□□□□ 0.28
SSR1-205ENST00000475213 NSD2O96028 1365 aa16.82■□□□□ 0.28
SSR1-205ENST00000475213 KIF7Q2M1P5 1343 aa16.82■□□□□ 0.28
SSR1-205ENST00000475213 PRIM1P49642 420 aaKnown RBP16.82■□□□□ 0.28
SSR1-205ENST00000475213 SYTL4Q96C24 671 aaPredicted RBP16.81■□□□□ 0.28
SSR1-205ENST00000475213 STK32BQ9NY57 414 aa16.81■□□□□ 0.28
SSR1-205ENST00000475213 PKD1L3Q7Z443 1732 aa16.81■□□□□ 0.28
SSR1-205ENST00000475213 PAPPAQ13219 1627 aa16.81■□□□□ 0.28
SSR1-205ENST00000475213 ATXN8OSP0DMR3 200 aa16.8■□□□□ 0.28
SSR1-205ENST00000475213 SLC15A2Q16348 729 aa16.8■□□□□ 0.28
SSR1-205ENST00000475213 EYA1Q99502 592 aa16.8■□□□□ 0.28
SSR1-205ENST00000475213 PCDH11XQ9BZA7 1347 aa16.79■□□□□ 0.28
SSR1-205ENST00000475213 PCDH11YQ9BZA8 1340 aa16.79■□□□□ 0.28
SSR1-205ENST00000475213 PDGFDQ9GZP0 370 aaPredicted RBP16.79■□□□□ 0.28
SSR1-205ENST00000475213 KNSTRNQ9Y448 316 aa16.79■□□□□ 0.28
SSR1-205ENST00000475213 LY75O60449 1722 aa16.79■□□□□ 0.28
SSR1-205ENST00000475213 EIF4A2Q14240 407 aaKnown RBP16.78■□□□□ 0.28
SSR1-205ENST00000475213 MORC1Q86VD1 984 aa16.78■□□□□ 0.28
SSR1-205ENST00000475213 SPON1Q9HCB6 807 aa16.78■□□□□ 0.28
SSR1-205ENST00000475213 LRRC4BQ9NT99 713 aa16.78■□□□□ 0.28
SSR1-205ENST00000475213 CYP27B1O15528 508 aa16.77■□□□□ 0.28
SSR1-205ENST00000475213 ITGB4P16144 1822 aa16.76■□□□□ 0.27
SSR1-205ENST00000475213 TOGARAM1Q9Y4F4 1720 aa16.76■□□□□ 0.27
SSR1-205ENST00000475213 AMER1Q5JTC6 1135 aaPredicted RBP16.75■□□□□ 0.27
SSR1-205ENST00000475213 SLC27A3Q5K4L6 730 aa16.75■□□□□ 0.27
SSR1-205ENST00000475213 ZNF827Q17R98 1081 aa16.74■□□□□ 0.27
SSR1-205ENST00000475213 SPG7Q9UQ90 795 aa16.74■□□□□ 0.27
SSR1-205ENST00000475213 ZBTB7AO95365 584 aa16.73■□□□□ 0.27
SSR1-205ENST00000475213 KCNQ4P56696 695 aa16.73■□□□□ 0.27
SSR1-205ENST00000475213 IGSF1Q8N6C5 1336 aa16.72■□□□□ 0.27
SSR1-205ENST00000475213 PER1O15534 1290 aaPredicted RBP16.72■□□□□ 0.27
SSR1-205ENST00000475213 NKX1-1Q15270 411 aaPredicted RBP16.72■□□□□ 0.27
SSR1-205ENST00000475213 AKT1S1Q96B36 256 aa16.72■□□□□ 0.27
SSR1-205ENST00000475213 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.72■□□□□ 0.27
SSR1-205ENST00000475213 PPP1R1BQ9UD71 204 aaPredicted RBP16.72■□□□□ 0.27
SSR1-205ENST00000475213 QSER1Q2KHR3 1735 aa16.72■□□□□ 0.27
SSR1-205ENST00000475213 TUBGCP6Q96RT7 1819 aa16.72■□□□□ 0.27
SSR1-205ENST00000475213 MPRIPQ6WCQ1 1025 aa16.7■□□□□ 0.26
SSR1-205ENST00000475213 CCNL1Q9UK58 526 aaPredicted RBP16.7■□□□□ 0.26
SSR1-205ENST00000475213 PLEKHG2Q9H7P9 1386 aa16.69■□□□□ 0.26
SSR1-205ENST00000475213 PTGER2P43116 358 aa16.69■□□□□ 0.26
SSR1-205ENST00000475213 IFNL2Q8IZJ0 200 aa16.69■□□□□ 0.26
SSR1-205ENST00000475213 TAF1LQ8IZX4 1826 aa16.68■□□□□ 0.26
SSR1-205ENST00000475213 PHKG2P15735 406 aa16.68■□□□□ 0.26
SSR1-205ENST00000475213 MTFR1LQ9H019 292 aa16.68■□□□□ 0.26
SSR1-205ENST00000475213 C5P01031 1676 aa16.67■□□□□ 0.26
SSR1-205ENST00000475213 CC2D1BQ5T0F9 858 aaKnown RBP16.67■□□□□ 0.26
SSR1-205ENST00000475213 PIGBQ92521 554 aa16.67■□□□□ 0.26
SSR1-205ENST00000475213 PALLDQ8WX93 1383 aa16.66■□□□□ 0.26
SSR1-205ENST00000475213 IL13P35225 146 aa16.66■□□□□ 0.26
SSR1-205ENST00000475213 AEBP1Q8IUX7 1158 aa16.66■□□□□ 0.26
SSR1-205ENST00000475213 SGIP1Q9BQI5 828 aa16.66■□□□□ 0.26
SSR1-205ENST00000475213 TFCP2L1Q9NZI6 479 aa16.66■□□□□ 0.26
SSR1-205ENST00000475213 PNPLA7Q6ZV29 1317 aa16.66■□□□□ 0.26
SSR1-205ENST00000475213 MTHFSP49914 203 aa16.65■□□□□ 0.26
SSR1-205ENST00000475213 PLEKHO1Q53GL0 409 aaPredicted RBP16.64■□□□□ 0.25
SSR1-205ENST00000475213 SMARCC1Q92922 1105 aaPredicted RBP16.64■□□□□ 0.25
SSR1-205ENST00000475213 NPC1L1Q9UHC9 1359 aa16.64■□□□□ 0.25
SSR1-205ENST00000475213 SULT6B1Q6IMI4 303 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms