RNA–Protein interactions for RNA: ENST00000474926.5

PHTF1-209, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 2

Gene PHTF1, Length 4,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-209ENST00000474926 HECW2Q9P2P5 1572 aa9.09□□□□□ -0.96
PHTF1-209ENST00000474926 ZMYM4Q5VZL5 1548 aa9.08□□□□□ -0.96
PHTF1-209ENST00000474926 CROCC2H7BZ55 1655 aa9.08□□□□□ -0.96
PHTF1-209ENST00000474926 CNTROBQ8N137 903 aa9.08□□□□□ -0.96
PHTF1-209ENST00000474926 ABCC3O15438 1527 aa9.08□□□□□ -0.96
PHTF1-209ENST00000474926 FSD1Q9BTV5 496 aa9.08□□□□□ -0.96
PHTF1-209ENST00000474926 CLTCL1P53675 1640 aa9.08□□□□□ -0.96
PHTF1-209ENST00000474926 EDC4Q6P2E9 1401 aaKnown RBP9.08□□□□□ -0.96
PHTF1-209ENST00000474926 FLT4P35916 1363 aa9.08□□□□□ -0.96
PHTF1-209ENST00000474926 ARAP3Q8WWN8 1544 aa9.08□□□□□ -0.96
PHTF1-209ENST00000474926 PTMSP20962 102 aa9.07□□□□□ -0.96
PHTF1-209ENST00000474926 ZFYVE9O95405 1425 aa9.07□□□□□ -0.96
PHTF1-209ENST00000474926 CFAP74Q9C0B2 1584 aa9.07□□□□□ -0.96
PHTF1-209ENST00000474926 PI4KAP2A4QPH2 592 aa9.07□□□□□ -0.96
PHTF1-209ENST00000474926 GCP02774 474 aa9.07□□□□□ -0.96
PHTF1-209ENST00000474926 GNL2Q13823 731 aaKnown RBP9.07□□□□□ -0.96
PHTF1-209ENST00000474926 DNTTIP2Q5QJE6 756 aaKnown RBP9.07□□□□□ -0.96
PHTF1-209ENST00000474926 PI4KAP1Q8N8J0 262 aa9.07□□□□□ -0.96
PHTF1-209ENST00000474926 UNC13BO14795 1591 aa9.07□□□□□ -0.96
PHTF1-209ENST00000474926 HOXC9P31274 260 aa9.07□□□□□ -0.96
PHTF1-209ENST00000474926 CADPS2Q86UW7 1296 aa9.07□□□□□ -0.96
PHTF1-209ENST00000474926 ARHGAP45Q92619 1136 aa9.07□□□□□ -0.96
PHTF1-209ENST00000474926 DNAJC2Q99543 621 aaKnown RBP9.07□□□□□ -0.96
PHTF1-209ENST00000474926 EFCAB6Q5THR3 1501 aa9.07□□□□□ -0.96
PHTF1-209ENST00000474926 TSHZ3Q63HK5 1081 aa9.07□□□□□ -0.96
PHTF1-209ENST00000474926 DNAAF4Q8WXU2 420 aa9.07□□□□□ -0.96
PHTF1-209ENST00000474926 TET3O43151 1660 aa9.06□□□□□ -0.96
PHTF1-209ENST00000474926 PTPRCP08575 1304 aa9.06□□□□□ -0.96
PHTF1-209ENST00000474926 HDAC1Q13547 482 aaPredicted RBP9.06□□□□□ -0.96
PHTF1-209ENST00000474926 CCDC85AQ96PX6 553 aaPredicted RBP9.06□□□□□ -0.96
PHTF1-209ENST00000474926 PIP4K2BP78356 416 aa9.06□□□□□ -0.96
PHTF1-209ENST00000474926 SLC39A6Q13433 755 aa9.06□□□□□ -0.96
PHTF1-209ENST00000474926 KDM5AP29375 1690 aaKnown RBP9.06□□□□□ -0.96
PHTF1-209ENST00000474926 PLEKHG3A1L390 1219 aa9.06□□□□□ -0.96
PHTF1-209ENST00000474926 AACSQ86V21 672 aa9.06□□□□□ -0.96
PHTF1-209ENST00000474926 APPP05067 770 aa9.05□□□□□ -0.96
PHTF1-209ENST00000474926 C8orf34Q49A92 452 aa9.05□□□□□ -0.96
PHTF1-209ENST00000474926 ZBTB40Q9NUA8 1239 aa9.05□□□□□ -0.96
PHTF1-209ENST00000474926 DBF4Q9UBU7 674 aaPredicted RBP9.05□□□□□ -0.96
PHTF1-209ENST00000474926 RABEP1Q15276 862 aa9.05□□□□□ -0.96
PHTF1-209ENST00000474926 MCTP1Q6DN14 999 aa9.05□□□□□ -0.96
PHTF1-209ENST00000474926 C19orf44Q9H6X5 657 aa9.05□□□□□ -0.96
PHTF1-209ENST00000474926 CHPF2Q9P2E5 772 aa9.05□□□□□ -0.96
PHTF1-209ENST00000474926 C16orf71Q8IYS4 520 aaPredicted RBP9.04□□□□□ -0.96
PHTF1-209ENST00000474926 JARID2Q92833 1246 aaPredicted RBP9.04□□□□□ -0.96
PHTF1-209ENST00000474926 MYD88Q99836 296 aa9.04□□□□□ -0.96
PHTF1-209ENST00000474926 TRPM1Q7Z4N2 1603 aa9.04□□□□□ -0.96
PHTF1-209ENST00000474926 MX1P20591 662 aa9.04□□□□□ -0.96
PHTF1-209ENST00000474926 NUCB1Q02818 461 aa9.04□□□□□ -0.96
PHTF1-209ENST00000474926 WASHC4Q2M389 1173 aa9.04□□□□□ -0.96
PHTF1-209ENST00000474926 RNF20Q5VTR2 975 aa9.04□□□□□ -0.96
PHTF1-209ENST00000474926 NAP1L5Q96NT1 182 aaPredicted RBP9.04□□□□□ -0.96
PHTF1-209ENST00000474926 ZNF521Q96K83 1311 aa9.04□□□□□ -0.96
PHTF1-209ENST00000474926 INSRP06213 1382 aa9.04□□□□□ -0.96
PHTF1-209ENST00000474926 KIF1BO60333 1816 aa9.04□□□□□ -0.96
PHTF1-209ENST00000474926 CWC27Q6UX04 472 aaKnown RBP9.04□□□□□ -0.96
PHTF1-209ENST00000474926 G2E3Q7L622 706 aa9.04□□□□□ -0.96
PHTF1-209ENST00000474926 ERC1Q8IUD2 1116 aa9.04□□□□□ -0.96
PHTF1-209ENST00000474926 DDX17Q92841 729 aaKnown RBP9.04□□□□□ -0.96
PHTF1-209ENST00000474926 SYAP1Q96A49 352 aaPredicted RBP9.04□□□□□ -0.96
PHTF1-209ENST00000474926 ROBO2Q9HCK4 1378 aa9.04□□□□□ -0.96
PHTF1-209ENST00000474926 VPS37CA5D8V6 355 aaPredicted RBP9.04□□□□□ -0.96
PHTF1-209ENST00000474926 SEC24BO95487 1268 aa9.04□□□□□ -0.96
PHTF1-209ENST00000474926 PIP4K2AP48426 406 aaPredicted RBP9.04□□□□□ -0.96
PHTF1-209ENST00000474926 NUCB2P80303 420 aa9.04□□□□□ -0.96
PHTF1-209ENST00000474926 FAM184AQ8NB25 1140 aa9.04□□□□□ -0.96
PHTF1-209ENST00000474926 ISY1Q9ULR0 285 aaKnown RBP9.04□□□□□ -0.96
PHTF1-209ENST00000474926 MAP3K2Q9Y2U5 619 aa9.04□□□□□ -0.96
PHTF1-209ENST00000474926 PRR36Q9H6K5 1346 aa9.03□□□□□ -0.96
PHTF1-209ENST00000474926 ADAMTS2O95450 1211 aa9.03□□□□□ -0.96
PHTF1-209ENST00000474926 KIF6Q6ZMV9 814 aa9.03□□□□□ -0.96
PHTF1-209ENST00000474926 ABCA9Q8IUA7 1624 aa9.03□□□□□ -0.96
PHTF1-209ENST00000474926 H3BQV1 296 aa9.03□□□□□ -0.96
PHTF1-209ENST00000474926 IFFO2Q5TF58 517 aa9.03□□□□□ -0.96
PHTF1-209ENST00000474926 TBC1D9Q6ZT07 1266 aa9.03□□□□□ -0.96
PHTF1-209ENST00000474926 IFNL2Q8IZJ0 200 aa9.03□□□□□ -0.96
PHTF1-209ENST00000474926 IP6K1Q92551 441 aa9.03□□□□□ -0.96
PHTF1-209ENST00000474926 PLEKHF1Q96S99 279 aa9.03□□□□□ -0.96
PHTF1-209ENST00000474926 TBC1D2Q9BYX2 928 aa9.03□□□□□ -0.96
PHTF1-209ENST00000474926 SMC3Q9UQE7 1217 aa9.03□□□□□ -0.96
PHTF1-209ENST00000474926 LARP1Q6PKG0 1096 aaKnown RBP9.03□□□□□ -0.96
PHTF1-209ENST00000474926 PPP1R42Q7Z4L9 355 aa9.03□□□□□ -0.96
PHTF1-209ENST00000474926 TRMT2AQ8IZ69 625 aaKnown RBP9.03□□□□□ -0.96
PHTF1-209ENST00000474926 SIRT1Q96EB6 747 aa9.03□□□□□ -0.96
PHTF1-209ENST00000474926 KIF1BPQ96EK5 621 aa9.03□□□□□ -0.96
PHTF1-209ENST00000474926 SHROOM2Q13796 1616 aa9.03□□□□□ -0.96
PHTF1-209ENST00000474926 K7ELQ4 463 aaPredicted RBP9.02□□□□□ -0.96
PHTF1-209ENST00000474926 FOSBP53539 338 aa9.02□□□□□ -0.96
PHTF1-209ENST00000474926 SYNMO15061 1565 aa9.02□□□□□ -0.96
PHTF1-209ENST00000474926 RNF17Q9BXT8 1623 aaKnown RBP9.02□□□□□ -0.96
PHTF1-209ENST00000474926 ATP5J2-PTCD1G3V325 749 aa9.02□□□□□ -0.97
PHTF1-209ENST00000474926 ZBTB7BO15156 539 aaPredicted RBP9.02□□□□□ -0.97
PHTF1-209ENST00000474926 BMP2KLQ5H9B9 411 aa9.02□□□□□ -0.97
PHTF1-209ENST00000474926 MEX3CQ5U5Q3 659 aaKnown RBP9.02□□□□□ -0.97
PHTF1-209ENST00000474926 E9PCH4 1651 aa9.02□□□□□ -0.97
PHTF1-209ENST00000474926 KDM2BQ8NHM5 1336 aa9.02□□□□□ -0.97
PHTF1-209ENST00000474926 TRAK2O60296 914 aa9.02□□□□□ -0.97
PHTF1-209ENST00000474926 SKOR2Q2VWA4 1001 aaPredicted RBP9.02□□□□□ -0.97
PHTF1-209ENST00000474926 ANKRD44Q8N8A2 993 aa9.02□□□□□ -0.97
PHTF1-209ENST00000474926 CCDC8Q9H0W5 538 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms