RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 NPHP4O75161 1426 aaPredicted RBP5.15□□□□□ -1.58
USP16-205ENST00000474835 BECN1Q14457 450 aa5.15□□□□□ -1.59
USP16-205ENST00000474835 TAF3Q5VWG9 929 aa5.15□□□□□ -1.59
USP16-205ENST00000474835 KCNB2Q92953 911 aa5.15□□□□□ -1.59
USP16-205ENST00000474835 DDX41Q9UJV9 622 aaKnown RBP5.15□□□□□ -1.59
USP16-205ENST00000474835 LRP5O75197 1615 aa5.15□□□□□ -1.59
USP16-205ENST00000474835 TJP1Q07157 1748 aa5.15□□□□□ -1.59
USP16-205ENST00000474835 PAPPAQ13219 1627 aa5.15□□□□□ -1.59
USP16-205ENST00000474835 GABPB1Q06547 395 aaPredicted RBP5.15□□□□□ -1.59
USP16-205ENST00000474835 TMEM63CQ9P1W3 806 aa5.15□□□□□ -1.59
USP16-205ENST00000474835 PKD1L3Q7Z443 1732 aa5.14□□□□□ -1.59
USP16-205ENST00000474835 GSPT1P15170 499 aaKnown RBP5.14□□□□□ -1.59
USP16-205ENST00000474835 SLKQ9H2G2 1235 aaPredicted RBP5.14□□□□□ -1.59
USP16-205ENST00000474835 MYH16Q9H6N6 1097 aa5.14□□□□□ -1.59
USP16-205ENST00000474835 RNF216Q9NWF9 866 aaPredicted RBP5.14□□□□□ -1.59
USP16-205ENST00000474835 NSFL1CQ9UNZ2 370 aaKnown RBP5.14□□□□□ -1.59
USP16-205ENST00000474835 CEMIPQ8WUJ3 1361 aa5.14□□□□□ -1.59
USP16-205ENST00000474835 RREB1Q92766 1687 aa5.14□□□□□ -1.59
USP16-205ENST00000474835 ARAP2Q8WZ64 1704 aa5.14□□□□□ -1.59
USP16-205ENST00000474835 C5P01031 1676 aa5.14□□□□□ -1.59
USP16-205ENST00000474835 ARHGEF10O15013 1369 aa5.14□□□□□ -1.59
USP16-205ENST00000474835 BRD1O95696 1058 aa5.14□□□□□ -1.59
USP16-205ENST00000474835 IQUBQ8NA54 791 aa5.14□□□□□ -1.59
USP16-205ENST00000474835 KIAA1524Q8TCG1 905 aa5.14□□□□□ -1.59
USP16-205ENST00000474835 ARHGAP45Q92619 1136 aa5.14□□□□□ -1.59
USP16-205ENST00000474835 USP26Q9BXU7 913 aa5.14□□□□□ -1.59
USP16-205ENST00000474835 RIMS2Q9UQ26 1411 aa5.14□□□□□ -1.59
USP16-205ENST00000474835 TTC21BQ7Z4L5 1316 aa5.14□□□□□ -1.59
USP16-205ENST00000474835 C1orf167Q5SNV9 1468 aa5.14□□□□□ -1.59
USP16-205ENST00000474835 UVSSAQ2YD98 709 aa5.14□□□□□ -1.59
USP16-205ENST00000474835 MSL3Q8N5Y2 521 aaKnown RBP5.14□□□□□ -1.59
USP16-205ENST00000474835 FEZ1Q99689 392 aa5.14□□□□□ -1.59
USP16-205ENST00000474835 TMEM94Q12767 1356 aa5.13□□□□□ -1.59
USP16-205ENST00000474835 CSPP1Q1MSJ5 1256 aa5.13□□□□□ -1.59
USP16-205ENST00000474835 CCDC93Q567U6 631 aa5.13□□□□□ -1.59
USP16-205ENST00000474835 A0A1B0GUL6 1792 aa5.13□□□□□ -1.59
USP16-205ENST00000474835 ZBTB7BO15156 539 aaPredicted RBP5.13□□□□□ -1.59
USP16-205ENST00000474835 NOP2P46087 812 aaKnown RBP5.13□□□□□ -1.59
USP16-205ENST00000474835 IRX5P78411 483 aaPredicted RBP5.13□□□□□ -1.59
USP16-205ENST00000474835 P3H3Q8IVL6 736 aa5.13□□□□□ -1.59
USP16-205ENST00000474835 NCAPD2Q15021 1401 aa5.13□□□□□ -1.59
USP16-205ENST00000474835 ALDH1L2Q3SY69 923 aa5.13□□□□□ -1.59
USP16-205ENST00000474835 SNRKQ9NRH2 765 aa5.13□□□□□ -1.59
USP16-205ENST00000474835 MYH13Q9UKX3 1938 aa5.12□□□□□ -1.59
USP16-205ENST00000474835 TECPR2O15040 1411 aa5.12□□□□□ -1.59
USP16-205ENST00000474835 NCBP1Q09161 790 aaKnown RBP5.12□□□□□ -1.59
USP16-205ENST00000474835 NPM2Q86SE8 214 aaKnown RBP5.12□□□□□ -1.59
USP16-205ENST00000474835 USP25Q9UHP3 1055 aa5.12□□□□□ -1.59
USP16-205ENST00000474835 UBR2Q8IWV8 1755 aa5.12□□□□□ -1.59
USP16-205ENST00000474835 UQCRHLA0A096LP55 91 aa5.12□□□□□ -1.59
USP16-205ENST00000474835 K7ELQ4 463 aaPredicted RBP5.12□□□□□ -1.59
USP16-205ENST00000474835 UQCRHP07919 91 aa5.12□□□□□ -1.59
USP16-205ENST00000474835 PRIM1P49642 420 aaKnown RBP5.12□□□□□ -1.59
USP16-205ENST00000474835 MUM1L1Q5H9M0 696 aa5.12□□□□□ -1.59
USP16-205ENST00000474835 NYAP1Q6ZVC0 841 aa5.12□□□□□ -1.59
USP16-205ENST00000474835 CHIC2Q9UKJ5 165 aa5.12□□□□□ -1.59
USP16-205ENST00000474835 NEDD4P46934 1319 aa5.12□□□□□ -1.59
USP16-205ENST00000474835 NASPP49321 788 aaPredicted RBP5.12□□□□□ -1.59
USP16-205ENST00000474835 ZNF446Q9NWS9 450 aa5.12□□□□□ -1.59
USP16-205ENST00000474835 DOCK2Q92608 1830 aa5.12□□□□□ -1.59
USP16-205ENST00000474835 PTPRCP08575 1304 aa5.12□□□□□ -1.59
USP16-205ENST00000474835 BCORQ6W2J9 1755 aa5.11□□□□□ -1.59
USP16-205ENST00000474835 ZRANB2O95218 330 aaKnown RBP eCLIP5.11□□□□□ -1.59
USP16-205ENST00000474835 TRIM27P14373 513 aa5.11□□□□□ -1.59
USP16-205ENST00000474835 H2AFXP16104 143 aaPredicted RBP5.11□□□□□ -1.59
USP16-205ENST00000474835 BCL2L12Q9HB09 334 aa5.11□□□□□ -1.59
USP16-205ENST00000474835 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.11□□□□□ -1.59
USP16-205ENST00000474835 MYH7P12883 1935 aa5.11□□□□□ -1.59
USP16-205ENST00000474835 CCDC171Q6TFL3 1326 aa5.11□□□□□ -1.59
USP16-205ENST00000474835 TRPM3Q9HCF6 1732 aaPredicted RBP5.11□□□□□ -1.59
USP16-205ENST00000474835 KIF13BQ9NQT8 1826 aa5.11□□□□□ -1.59
USP16-205ENST00000474835 SOX12O15370 315 aa5.11□□□□□ -1.59
USP16-205ENST00000474835 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.11□□□□□ -1.59
USP16-205ENST00000474835 PANK1Q8TE04 598 aa5.11□□□□□ -1.59
USP16-205ENST00000474835 NPATQ14207 1427 aa5.11□□□□□ -1.59
USP16-205ENST00000474835 NSD3Q9BZ95 1437 aa5.11□□□□□ -1.59
USP16-205ENST00000474835 UBR1Q8IWV7 1749 aa5.11□□□□□ -1.59
USP16-205ENST00000474835 RPS6KA5O75582 802 aa5.11□□□□□ -1.59
USP16-205ENST00000474835 SSFA2P28290 1259 aa5.11□□□□□ -1.59
USP16-205ENST00000474835 TEX2Q8IWB9 1127 aa5.11□□□□□ -1.59
USP16-205ENST00000474835 ZNF428Q96B54 188 aa5.11□□□□□ -1.59
USP16-205ENST00000474835 KIAA1551Q9HCM1 1747 aa5.1□□□□□ -1.59
USP16-205ENST00000474835 RBM6P78332 1123 aaKnown RBP5.1□□□□□ -1.59
USP16-205ENST00000474835 TMF1P82094 1093 aa5.1□□□□□ -1.59
USP16-205ENST00000474835 PKP1Q13835 747 aa5.1□□□□□ -1.59
USP16-205ENST00000474835 JARID2Q92833 1246 aaPredicted RBP5.1□□□□□ -1.59
USP16-205ENST00000474835 INTS4Q96HW7 963 aaKnown RBP5.1□□□□□ -1.59
USP16-205ENST00000474835 CRB1P82279 1406 aa5.1□□□□□ -1.59
USP16-205ENST00000474835 TERF2Q15554 542 aa5.1□□□□□ -1.59
USP16-205ENST00000474835 LRP6O75581 1613 aa5.1□□□□□ -1.59
USP16-205ENST00000474835 ANKARQ7Z5J8 1434 aa5.1□□□□□ -1.59
USP16-205ENST00000474835 RUNDC1Q96C34 613 aa5.1□□□□□ -1.59
USP16-205ENST00000474835 CYP2C19P33261 490 aa5.09□□□□□ -1.59
USP16-205ENST00000474835 PDE4CQ08493 712 aa5.09□□□□□ -1.59
USP16-205ENST00000474835 TAF7LQ5H9L4 462 aa5.09□□□□□ -1.59
USP16-205ENST00000474835 TBC1D9Q6ZT07 1266 aa5.09□□□□□ -1.59
USP16-205ENST00000474835 PLA2G4DQ86XP0 818 aa5.09□□□□□ -1.59
USP16-205ENST00000474835 RGS22Q8NE09 1264 aa5.09□□□□□ -1.59
USP16-205ENST00000474835 L2HGDHQ9H9P8 463 aa5.09□□□□□ -1.59
USP16-205ENST00000474835 CWC22Q9HCG8 908 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms