RNA–Protein interactions for RNA: ENST00000473978.5

PCYT1A-214, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-214ENST00000473978 CCNL1Q9UK58 526 aaPredicted RBP18.56■□□□□ 0.56
PCYT1A-214ENST00000473978 CENPJQ9HC77 1338 aaPredicted RBP18.55■□□□□ 0.56
PCYT1A-214ENST00000473978 NBPF1Q3BBV0 1214 aa18.54■□□□□ 0.56
PCYT1A-214ENST00000473978 NSD2O96028 1365 aa18.53■□□□□ 0.56
PCYT1A-214ENST00000473978 ANKRD36BQ8N2N9 1353 aa18.53■□□□□ 0.56
PCYT1A-214ENST00000473978 SLC34A2O95436 690 aa18.52■□□□□ 0.56
PCYT1A-214ENST00000473978 ANKRD24Q8TF21 1146 aa18.51■□□□□ 0.55
PCYT1A-214ENST00000473978 ZNF692Q9BU19 519 aaPredicted RBP18.51■□□□□ 0.55
PCYT1A-214ENST00000473978 NMRK2Q9NPI5 230 aa18.51■□□□□ 0.55
PCYT1A-214ENST00000473978 TTC21AQ8NDW8 1320 aa18.51■□□□□ 0.55
PCYT1A-214ENST00000473978 DOT1LQ8TEK3 1739 aa18.49■□□□□ 0.55
PCYT1A-214ENST00000473978 RBM46Q8TBY0 533 aaKnown RBP18.49■□□□□ 0.55
PCYT1A-214ENST00000473978 KIAA1210Q9ULL0 1709 aa18.48■□□□□ 0.55
PCYT1A-214ENST00000473978 CICQ96RK0 1608 aaPredicted RBP18.48■□□□□ 0.55
PCYT1A-214ENST00000473978 FLAD1Q8NFF5 587 aa18.46■□□□□ 0.55
PCYT1A-214ENST00000473978 USP47Q96K76 1375 aa18.45■□□□□ 0.54
PCYT1A-214ENST00000473978 LTN1O94822 1766 aa18.44■□□□□ 0.54
PCYT1A-214ENST00000473978 AMIGO3Q86WK7 504 aa18.43■□□□□ 0.54
PCYT1A-214ENST00000473978 C5P01031 1676 aa18.43■□□□□ 0.54
PCYT1A-214ENST00000473978 FSTL1Q12841 308 aa18.42■□□□□ 0.54
PCYT1A-214ENST00000473978 USP31Q70CQ4 1352 aa18.42■□□□□ 0.54
PCYT1A-214ENST00000473978 KTN1Q86UP2 1357 aaKnown RBP18.42■□□□□ 0.54
PCYT1A-214ENST00000473978 EVC2Q86UK5 1308 aa18.42■□□□□ 0.54
PCYT1A-214ENST00000473978 USP54Q70EL1 1684 aa18.42■□□□□ 0.54
PCYT1A-214ENST00000473978 C16orf71Q8IYS4 520 aaPredicted RBP18.41■□□□□ 0.54
PCYT1A-214ENST00000473978 SMIM5Q71RC9 77 aa18.4■□□□□ 0.54
PCYT1A-214ENST00000473978 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.4■□□□□ 0.54
PCYT1A-214ENST00000473978 RAB3GAP2Q9H2M9 1393 aa18.4■□□□□ 0.54
PCYT1A-214ENST00000473978 HSPA1AP0DMV8 641 aaKnown RBP18.4■□□□□ 0.54
PCYT1A-214ENST00000473978 HSPA1BP0DMV9 641 aaKnown RBP18.4■□□□□ 0.54
PCYT1A-214ENST00000473978 NME9Q86XW9 330 aa18.39■□□□□ 0.53
PCYT1A-214ENST00000473978 ZCRB1Q8TBF4 217 aaKnown RBP18.38■□□□□ 0.53
PCYT1A-214ENST00000473978 LTV1Q96GA3 475 aaPredicted RBP18.38■□□□□ 0.53
PCYT1A-214ENST00000473978 TAF1LQ8IZX4 1826 aa18.38■□□□□ 0.53
PCYT1A-214ENST00000473978 PHF14O94880 888 aa18.37■□□□□ 0.53
PCYT1A-214ENST00000473978 ARHGAP27Q6ZUM4 889 aa18.37■□□□□ 0.53
PCYT1A-214ENST00000473978 BCS1LQ9Y276 419 aa18.37■□□□□ 0.53
PCYT1A-214ENST00000473978 TOGARAM1Q9Y4F4 1720 aa18.37■□□□□ 0.53
PCYT1A-214ENST00000473978 PXDNLA1KZ92 1463 aa18.36■□□□□ 0.53
PCYT1A-214ENST00000473978 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.35■□□□□ 0.53
PCYT1A-214ENST00000473978 IP6K1Q92551 441 aa18.35■□□□□ 0.53
PCYT1A-214ENST00000473978 AK7Q96M32 723 aa18.35■□□□□ 0.53
PCYT1A-214ENST00000473978 C4BP0C0L5 1744 aa18.35■□□□□ 0.53
PCYT1A-214ENST00000473978 MON2Q7Z3U7 1717 aa18.35■□□□□ 0.53
PCYT1A-214ENST00000473978 PALLDQ8WX93 1383 aa18.34■□□□□ 0.53
PCYT1A-214ENST00000473978 MEGF6O75095 1541 aa18.33■□□□□ 0.53
PCYT1A-214ENST00000473978 HMGB2P26583 209 aaKnown RBP18.33■□□□□ 0.53
PCYT1A-214ENST00000473978 FAM208AQ9UK61 1670 aaKnown RBP18.33■□□□□ 0.52
PCYT1A-214ENST00000473978 UBR3Q6ZT12 1888 aa18.33■□□□□ 0.52
PCYT1A-214ENST00000473978 KIAA1551Q9HCM1 1747 aa18.33■□□□□ 0.52
PCYT1A-214ENST00000473978 A0A0G2JLW4 131 aa18.32■□□□□ 0.52
PCYT1A-214ENST00000473978 C9orf131Q5VYM1 1079 aa18.32■□□□□ 0.52
PCYT1A-214ENST00000473978 KCPQ6ZWJ8 1503 aa18.32■□□□□ 0.52
PCYT1A-214ENST00000473978 SBNO2Q9Y2G9 1366 aa18.32■□□□□ 0.52
PCYT1A-214ENST00000473978 N4BP2Q86UW6 1770 aaPredicted RBP18.32■□□□□ 0.52
PCYT1A-214ENST00000473978 RRAGCQ9HB90 399 aa18.32■□□□□ 0.52
PCYT1A-214ENST00000473978 TGFB2P61812 414 aa18.31■□□□□ 0.52
PCYT1A-214ENST00000473978 SSFA2P28290 1259 aa18.3■□□□□ 0.52
PCYT1A-214ENST00000473978 PLEKHG2Q9H7P9 1386 aa18.29■□□□□ 0.52
PCYT1A-214ENST00000473978 KIF13BQ9NQT8 1826 aa18.29■□□□□ 0.52
PCYT1A-214ENST00000473978 MMP10P09238 476 aa18.29■□□□□ 0.52
PCYT1A-214ENST00000473978 MPRIPQ6WCQ1 1025 aa18.29■□□□□ 0.52
PCYT1A-214ENST00000473978 SMC1BQ8NDV3 1235 aa18.29■□□□□ 0.52
PCYT1A-214ENST00000473978 KDM2BQ8NHM5 1336 aa18.29■□□□□ 0.52
PCYT1A-214ENST00000473978 C10orf71Q711Q0 1435 aa18.28■□□□□ 0.52
PCYT1A-214ENST00000473978 FCHSD2O94868 740 aa18.28■□□□□ 0.52
PCYT1A-214ENST00000473978 CD163L1Q9NR16 1453 aa18.28■□□□□ 0.52
PCYT1A-214ENST00000473978 RGPD2P0DJD1 1756 aa18.27■□□□□ 0.52
PCYT1A-214ENST00000473978 PCDH10Q9P2E7 1040 aa18.27■□□□□ 0.52
PCYT1A-214ENST00000473978 NSD3Q9BZ95 1437 aa18.27■□□□□ 0.52
PCYT1A-214ENST00000473978 DPEP1P16444 411 aa18.25■□□□□ 0.51
PCYT1A-214ENST00000473978 PKD1L3Q7Z443 1732 aa18.25■□□□□ 0.51
PCYT1A-214ENST00000473978 HOXC9P31274 260 aa18.24■□□□□ 0.51
PCYT1A-214ENST00000473978 LINC00116Q8NCU8 138 aa18.24■□□□□ 0.51
PCYT1A-214ENST00000473978 SMARCC1Q92922 1105 aaPredicted RBP18.23■□□□□ 0.51
PCYT1A-214ENST00000473978 NBPF6Q5VWK0 638 aa18.23■□□□□ 0.51
PCYT1A-214ENST00000473978 NBPF4Q96M43 638 aa18.23■□□□□ 0.51
PCYT1A-214ENST00000473978 RNF181Q9P0P0 153 aa18.23■□□□□ 0.51
PCYT1A-214ENST00000473978 TNRC6CQ9HCJ0 1690 aaKnown RBP18.23■□□□□ 0.51
PCYT1A-214ENST00000473978 BRCA1P38398 1863 aaKnown RBP18.22■□□□□ 0.51
PCYT1A-214ENST00000473978 CGNL1Q0VF96 1302 aa18.22■□□□□ 0.51
PCYT1A-214ENST00000473978 MAP3K19Q56UN5 1328 aa18.22■□□□□ 0.51
PCYT1A-214ENST00000473978 KCNA3P22001 575 aa18.22■□□□□ 0.51
PCYT1A-214ENST00000473978 USHBP1Q8N6Y0 703 aa18.22■□□□□ 0.51
PCYT1A-214ENST00000473978 GNPATO15228 680 aa18.21■□□□□ 0.51
PCYT1A-214ENST00000473978 FBLN1P23142 703 aa18.21■□□□□ 0.51
PCYT1A-214ENST00000473978 EDC4Q6P2E9 1401 aaKnown RBP18.2■□□□□ 0.5
PCYT1A-214ENST00000473978 AMPHP49418 695 aa18.2■□□□□ 0.5
PCYT1A-214ENST00000473978 RAPGEF4Q8WZA2 1011 aa18.2■□□□□ 0.5
PCYT1A-214ENST00000473978 MAP2P11137 1827 aaKnown RBP18.19■□□□□ 0.5
PCYT1A-214ENST00000473978 ARFGEF1Q9Y6D6 1849 aa18.19■□□□□ 0.5
PCYT1A-214ENST00000473978 LOC102724428A0A0B4J2F2 783 aa18.19■□□□□ 0.5
PCYT1A-214ENST00000473978 SIK1P57059 783 aa18.19■□□□□ 0.5
PCYT1A-214ENST00000473978 HDGFL2Q7Z4V5 671 aaPredicted RBP18.19■□□□□ 0.5
PCYT1A-214ENST00000473978 TMC1Q8TDI8 760 aa18.19■□□□□ 0.5
PCYT1A-214ENST00000473978 PIGBQ92521 554 aa18.19■□□□□ 0.5
PCYT1A-214ENST00000473978 ITGB4P16144 1822 aa18.18■□□□□ 0.5
PCYT1A-214ENST00000473978 PCDH11XQ9BZA7 1347 aa18.18■□□□□ 0.5
PCYT1A-214ENST00000473978 PCDH11YQ9BZA8 1340 aa18.18■□□□□ 0.5
PCYT1A-214ENST00000473978 DCAF5Q96JK2 942 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms