RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 MVPQ14764 893 aaKnown RBP16.63■□□□□ 0.25
SCAMP4-207ENST00000472442 PDZRN3Q9UPQ7 1066 aa16.63■□□□□ 0.25
SCAMP4-207ENST00000472442 EYA1Q99502 592 aa16.63■□□□□ 0.25
SCAMP4-207ENST00000472442 ALDH1L2Q3SY69 923 aa16.62■□□□□ 0.25
SCAMP4-207ENST00000472442 ATF7IPQ6VMQ6 1270 aa16.62■□□□□ 0.25
SCAMP4-207ENST00000472442 KDRP35968 1356 aa16.62■□□□□ 0.25
SCAMP4-207ENST00000472442 HOXC9P31274 260 aa16.62■□□□□ 0.25
SCAMP4-207ENST00000472442 IGSF1Q8N6C5 1336 aa16.62■□□□□ 0.25
SCAMP4-207ENST00000472442 GLIPR1L2Q4G1C9 344 aa16.61■□□□□ 0.25
SCAMP4-207ENST00000472442 C14orf37Q86TY3 774 aa16.61■□□□□ 0.25
SCAMP4-207ENST00000472442 ORAI2Q96SN7 254 aa16.61■□□□□ 0.25
SCAMP4-207ENST00000472442 AAMPQ13685 434 aa16.61■□□□□ 0.25
SCAMP4-207ENST00000472442 FTSJ3Q8IY81 847 aaKnown RBP16.61■□□□□ 0.25
SCAMP4-207ENST00000472442 KIF24Q5T7B8 1368 aa16.6■□□□□ 0.25
SCAMP4-207ENST00000472442 ELL2O00472 640 aaPredicted RBP16.6■□□□□ 0.25
SCAMP4-207ENST00000472442 MCM10Q7L590 875 aa16.6■□□□□ 0.25
SCAMP4-207ENST00000472442 C8orf58Q8NAV2 365 aa16.6■□□□□ 0.25
SCAMP4-207ENST00000472442 ZNF428Q96B54 188 aa16.6■□□□□ 0.25
SCAMP4-207ENST00000472442 PKNOX2Q96KN3 472 aa16.6■□□□□ 0.25
SCAMP4-207ENST00000472442 BRPF1P55201 1214 aaPredicted RBP16.59■□□□□ 0.25
SCAMP4-207ENST00000472442 PSME1Q06323 249 aa16.59■□□□□ 0.25
SCAMP4-207ENST00000472442 FOXO3O43524 673 aa16.59■□□□□ 0.25
SCAMP4-207ENST00000472442 TRAK2O60296 914 aa16.59■□□□□ 0.25
SCAMP4-207ENST00000472442 MTHFSDQ2M296 383 aaKnown RBP16.59■□□□□ 0.25
SCAMP4-207ENST00000472442 KIF16BQ96L93 1317 aa16.59■□□□□ 0.25
SCAMP4-207ENST00000472442 PROSER2Q86WR7 435 aaPredicted RBP16.59■□□□□ 0.25
SCAMP4-207ENST00000472442 MRPL50Q8N5N7 158 aaKnown RBP16.58■□□□□ 0.24
SCAMP4-207ENST00000472442 CHMP5Q9NZZ3 219 aa16.58■□□□□ 0.24
SCAMP4-207ENST00000472442 TMEM57Q8N5G2 664 aa16.57■□□□□ 0.24
SCAMP4-207ENST00000472442 HSP90AA1P07900 732 aaKnown RBP16.57■□□□□ 0.24
SCAMP4-207ENST00000472442 TWISTNBQ3B726 338 aaPredicted RBP16.57■□□□□ 0.24
SCAMP4-207ENST00000472442 NFAT5O94916 1531 aa16.57■□□□□ 0.24
SCAMP4-207ENST00000472442 CHL1O00533 1208 aa16.56■□□□□ 0.24
SCAMP4-207ENST00000472442 MRE11P49959 708 aa16.56■□□□□ 0.24
SCAMP4-207ENST00000472442 XPCQ01831 940 aaPredicted RBP16.56■□□□□ 0.24
SCAMP4-207ENST00000472442 HSP90AA2PQ14568 343 aaPredicted RBP16.56■□□□□ 0.24
SCAMP4-207ENST00000472442 CRB1P82279 1406 aa16.56■□□□□ 0.24
SCAMP4-207ENST00000472442 IPO8O15397 1037 aaKnown RBP16.56■□□□□ 0.24
SCAMP4-207ENST00000472442 MFAP1P55081 439 aaKnown RBP16.56■□□□□ 0.24
SCAMP4-207ENST00000472442 ITPRIPQ8IWB1 547 aa16.56■□□□□ 0.24
SCAMP4-207ENST00000472442 LTN1O94822 1766 aa16.55■□□□□ 0.24
SCAMP4-207ENST00000472442 VSIG10Q8N0Z9 540 aa16.55■□□□□ 0.24
SCAMP4-207ENST00000472442 C22orf23Q9BZE7 217 aa16.55■□□□□ 0.24
SCAMP4-207ENST00000472442 RWDD1Q9H446 243 aaPredicted RBP16.55■□□□□ 0.24
SCAMP4-207ENST00000472442 KRT24Q2M2I5 525 aa16.54■□□□□ 0.24
SCAMP4-207ENST00000472442 LTV1Q96GA3 475 aaPredicted RBP16.54■□□□□ 0.24
SCAMP4-207ENST00000472442 DDX19BQ9UMR2 479 aa16.54■□□□□ 0.24
SCAMP4-207ENST00000472442 RTL1A6NKG5 1358 aa16.54■□□□□ 0.24
SCAMP4-207ENST00000472442 C19orf44Q9H6X5 657 aa16.53■□□□□ 0.24
SCAMP4-207ENST00000472442 GRPEL1Q9HAV7 217 aa16.53■□□□□ 0.24
SCAMP4-207ENST00000472442 STRCP1A6NGW2 1772 aa16.53■□□□□ 0.24
SCAMP4-207ENST00000472442 IP6K1Q92551 441 aa16.53■□□□□ 0.24
SCAMP4-207ENST00000472442 C1orf167Q5SNV9 1468 aa16.53■□□□□ 0.24
SCAMP4-207ENST00000472442 RRP9O43818 475 aaKnown RBP16.52■□□□□ 0.24
SCAMP4-207ENST00000472442 ARHGAP45Q92619 1136 aa16.52■□□□□ 0.23
SCAMP4-207ENST00000472442 ZBTB40Q9NUA8 1239 aa16.52■□□□□ 0.23
SCAMP4-207ENST00000472442 HSPA2P54652 639 aa16.51■□□□□ 0.23
SCAMP4-207ENST00000472442 ERBB4Q15303 1308 aa16.51■□□□□ 0.23
SCAMP4-207ENST00000472442 MIS18AQ9NYP9 233 aa16.51■□□□□ 0.23
SCAMP4-207ENST00000472442 ESPNB1AK53 854 aa16.5■□□□□ 0.23
SCAMP4-207ENST00000472442 USHBP1Q8N6Y0 703 aa16.5■□□□□ 0.23
SCAMP4-207ENST00000472442 KCNH5Q8NCM2 988 aa16.5■□□□□ 0.23
SCAMP4-207ENST00000472442 GAS2L2Q8NHY3 880 aa16.5■□□□□ 0.23
SCAMP4-207ENST00000472442 TRPM3Q9HCF6 1732 aaPredicted RBP16.5■□□□□ 0.23
SCAMP4-207ENST00000472442 TMEM94Q12767 1356 aa16.5■□□□□ 0.23
SCAMP4-207ENST00000472442 DDX11L8A8MPP1 907 aa16.5■□□□□ 0.23
SCAMP4-207ENST00000472442 ZMYND15Q9H091 742 aa16.5■□□□□ 0.23
SCAMP4-207ENST00000472442 HSCBQ8IWL3 235 aa16.5■□□□□ 0.23
SCAMP4-207ENST00000472442 GCP02774 474 aa16.49■□□□□ 0.23
SCAMP4-207ENST00000472442 RTF1Q92541 710 aaKnown RBP16.49■□□□□ 0.23
SCAMP4-207ENST00000472442 KIAA0232Q92628 1395 aa16.49■□□□□ 0.23
SCAMP4-207ENST00000472442 NBPF6Q5VWK0 638 aa16.49■□□□□ 0.23
SCAMP4-207ENST00000472442 KRT28Q7Z3Y7 464 aa16.49■□□□□ 0.23
SCAMP4-207ENST00000472442 NBPF4Q96M43 638 aa16.49■□□□□ 0.23
SCAMP4-207ENST00000472442 SLIT3O75094 1523 aa16.48■□□□□ 0.23
SCAMP4-207ENST00000472442 PHRF1Q9P1Y6 1649 aaKnown RBP16.48■□□□□ 0.23
SCAMP4-207ENST00000472442 ABCC4O15439 1325 aa16.48■□□□□ 0.23
SCAMP4-207ENST00000472442 MSH6P52701 1360 aa16.48■□□□□ 0.23
SCAMP4-207ENST00000472442 HDAC1Q13547 482 aaPredicted RBP16.47■□□□□ 0.23
SCAMP4-207ENST00000472442 MST1RQ04912 1400 aa16.47■□□□□ 0.23
SCAMP4-207ENST00000472442 ZBTB7BO15156 539 aaPredicted RBP16.47■□□□□ 0.23
SCAMP4-207ENST00000472442 PLEKHG5O94827 1062 aa16.47■□□□□ 0.23
SCAMP4-207ENST00000472442 ARHGEF25Q86VW2 580 aa16.47■□□□□ 0.23
SCAMP4-207ENST00000472442 ZBTB7CA1YPR0 619 aa16.47■□□□□ 0.23
SCAMP4-207ENST00000472442 GNAT3A8MTJ3 354 aa16.46■□□□□ 0.23
SCAMP4-207ENST00000472442 HTATSF1O43719 755 aaKnown RBP16.46■□□□□ 0.23
SCAMP4-207ENST00000472442 LMOD2Q6P5Q4 547 aa16.46■□□□□ 0.23
SCAMP4-207ENST00000472442 KIF1AQ12756 1690 aa16.46■□□□□ 0.23
SCAMP4-207ENST00000472442 LRRC37A3O60309 1634 aa16.46■□□□□ 0.23
SCAMP4-207ENST00000472442 IL17REQ8NFR9 667 aa16.46■□□□□ 0.23
SCAMP4-207ENST00000472442 TRIM44Q96DX7 344 aaPredicted RBP16.45■□□□□ 0.22
SCAMP4-207ENST00000472442 TSPYL4Q9UJ04 414 aa16.45■□□□□ 0.22
SCAMP4-207ENST00000472442 RGPD2P0DJD1 1756 aa16.45■□□□□ 0.22
SCAMP4-207ENST00000472442 ATF3P18847 181 aa16.44■□□□□ 0.22
SCAMP4-207ENST00000472442 DDX17Q92841 729 aaKnown RBP16.44■□□□□ 0.22
SCAMP4-207ENST00000472442 LRRC59Q96AG4 307 aaKnown RBP16.44■□□□□ 0.22
SCAMP4-207ENST00000472442 ISY1Q9ULR0 285 aaKnown RBP16.44■□□□□ 0.22
SCAMP4-207ENST00000472442 MAP3K5Q99683 1374 aa16.44■□□□□ 0.22
SCAMP4-207ENST00000472442 GAS2L3Q86XJ1 694 aa16.44■□□□□ 0.22
SCAMP4-207ENST00000472442 RGS12O14924 1447 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms