RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 CAPN5O15484 640 aaPredicted RBP8.97□□□□□ -0.97
CDHR3-208ENST00000471910 TIMP2P16035 220 aa8.97□□□□□ -0.97
CDHR3-208ENST00000471910 LARP1Q6PKG0 1096 aaKnown RBP8.97□□□□□ -0.97
CDHR3-208ENST00000471910 PBXIP1Q96AQ6 731 aa8.97□□□□□ -0.97
CDHR3-208ENST00000471910 CYP2U1Q7Z449 544 aa8.96□□□□□ -0.98
CDHR3-208ENST00000471910 KLF16Q9BXK1 252 aaPredicted RBP8.96□□□□□ -0.98
CDHR3-208ENST00000471910 LILRA1O75019 489 aa8.95□□□□□ -0.98
CDHR3-208ENST00000471910 AVPP01185 164 aa8.95□□□□□ -0.98
CDHR3-208ENST00000471910 RASA1P20936 1047 aa8.95□□□□□ -0.98
CDHR3-208ENST00000471910 SCTRP47872 440 aa8.95□□□□□ -0.98
CDHR3-208ENST00000471910 CTC1Q2NKJ3 1217 aa8.95□□□□□ -0.98
CDHR3-208ENST00000471910 ZFAND3Q9H8U3 227 aa8.95□□□□□ -0.98
CDHR3-208ENST00000471910 RBM19Q9Y4C8 960 aaKnown RBP8.95□□□□□ -0.98
CDHR3-208ENST00000471910 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.94□□□□□ -0.98
CDHR3-208ENST00000471910 UPP2O95045 317 aa8.94□□□□□ -0.98
CDHR3-208ENST00000471910 GTF2IP78347 998 aa8.94□□□□□ -0.98
CDHR3-208ENST00000471910 PSME1Q06323 249 aa8.94□□□□□ -0.98
CDHR3-208ENST00000471910 CDCA8Q53HL2 280 aa8.94□□□□□ -0.98
CDHR3-208ENST00000471910 KANK4Q5T7N3 995 aaPredicted RBP8.94□□□□□ -0.98
CDHR3-208ENST00000471910 ADH1AP07327 375 aa8.93□□□□□ -0.98
CDHR3-208ENST00000471910 ADD1P35611 737 aaKnown RBP8.93□□□□□ -0.98
CDHR3-208ENST00000471910 CBLBQ13191 982 aa8.93□□□□□ -0.98
CDHR3-208ENST00000471910 Q6ZVU0 165 aa8.93□□□□□ -0.98
CDHR3-208ENST00000471910 OGFOD1Q8N543 542 aa8.93□□□□□ -0.98
CDHR3-208ENST00000471910 OSBPL3Q9H4L5 887 aa8.93□□□□□ -0.98
CDHR3-208ENST00000471910 DNAAF2Q9NVR5 837 aaKnown RBP8.93□□□□□ -0.98
CDHR3-208ENST00000471910 AXIN1O15169 862 aa8.92□□□□□ -0.98
CDHR3-208ENST00000471910 SMCPP49901 116 aaPredicted RBP8.92□□□□□ -0.98
CDHR3-208ENST00000471910 LARGE2Q8N3Y3 721 aa8.92□□□□□ -0.98
CDHR3-208ENST00000471910 FAM196BA6NMK8 535 aa8.91□□□□□ -0.98
CDHR3-208ENST00000471910 GNRH1P01148 92 aa8.91□□□□□ -0.98
CDHR3-208ENST00000471910 ESCO1Q5FWF5 840 aa8.91□□□□□ -0.98
CDHR3-208ENST00000471910 TSEN34Q9BSV6 310 aaKnown RBP8.91□□□□□ -0.98
CDHR3-208ENST00000471910 PCDHGA11Q9Y5H2 935 aa8.91□□□□□ -0.98
CDHR3-208ENST00000471910 SRPK2P78362 688 aaKnown RBP8.9□□□□□ -0.98
CDHR3-208ENST00000471910 MEIOBQ8N635 442 aa8.9□□□□□ -0.98
CDHR3-208ENST00000471910 USP17L15C9J2P7 530 aa8.89□□□□□ -0.99
CDHR3-208ENST00000471910 USP17L10C9JJH3 530 aa8.89□□□□□ -0.99
CDHR3-208ENST00000471910 USP17L13C9JLJ4 530 aa8.89□□□□□ -0.99
CDHR3-208ENST00000471910 USP17L12C9JPN9 530 aa8.89□□□□□ -0.99
CDHR3-208ENST00000471910 USP17L11C9JVI0 530 aa8.89□□□□□ -0.99
CDHR3-208ENST00000471910 USP17L21D6R901 530 aa8.89□□□□□ -0.99
CDHR3-208ENST00000471910 USP17L18D6R9N7 530 aa8.89□□□□□ -0.99
CDHR3-208ENST00000471910 USP17L22D6RA61 530 aa8.89□□□□□ -0.99
CDHR3-208ENST00000471910 USP17L17D6RBQ6 530 aa8.89□□□□□ -0.99
CDHR3-208ENST00000471910 USP17L19D6RCP7 530 aa8.89□□□□□ -0.99
CDHR3-208ENST00000471910 USP17L20D6RJB6 530 aa8.89□□□□□ -0.99
CDHR3-208ENST00000471910 ATG7O95352 703 aa8.89□□□□□ -0.99
CDHR3-208ENST00000471910 PTGIRP43119 386 aa8.89□□□□□ -0.99
CDHR3-208ENST00000471910 USP17L24Q0WX57 530 aa8.89□□□□□ -0.99
CDHR3-208ENST00000471910 SCARF1Q14162 830 aa8.89□□□□□ -0.99
CDHR3-208ENST00000471910 CCDC102BQ68D86 513 aa8.89□□□□□ -0.99
CDHR3-208ENST00000471910 CRIPAKQ8N1N5 446 aa8.89□□□□□ -0.99
CDHR3-208ENST00000471910 ZBTB7BO15156 539 aaPredicted RBP8.88□□□□□ -0.99
CDHR3-208ENST00000471910 CLDN10P78369 228 aa8.88□□□□□ -0.99
CDHR3-208ENST00000471910 RELBQ01201 579 aa8.88□□□□□ -0.99
CDHR3-208ENST00000471910 ZNF594Q96JF6 807 aaPredicted RBP8.88□□□□□ -0.99
CDHR3-208ENST00000471910 AGBL1Q96MI9 1066 aa8.88□□□□□ -0.99
CDHR3-208ENST00000471910 BACH1O14867 736 aa8.87□□□□□ -0.99
CDHR3-208ENST00000471910 CSB-PGBD3P0DP91 1061 aa8.87□□□□□ -0.99
CDHR3-208ENST00000471910 PTK7Q13308 1070 aa8.87□□□□□ -0.99
CDHR3-208ENST00000471910 ELOAQ14241 798 aaKnown RBP8.87□□□□□ -0.99
CDHR3-208ENST00000471910 MRPL14Q6P1L8 145 aaKnown RBP8.87□□□□□ -0.99
CDHR3-208ENST00000471910 Q6ZNB5 142 aa8.87□□□□□ -0.99
CDHR3-208ENST00000471910 TPCN2Q8NHX9 752 aa8.87□□□□□ -0.99
CDHR3-208ENST00000471910 FAM200AQ8TCP9 573 aa8.87□□□□□ -0.99
CDHR3-208ENST00000471910 NLRP3Q96P20 1036 aa8.87□□□□□ -0.99
CDHR3-208ENST00000471910 BMP2P12643 396 aa8.86□□□□□ -0.99
CDHR3-208ENST00000471910 GDF10P55107 478 aa8.86□□□□□ -0.99
CDHR3-208ENST00000471910 SEC13P55735 322 aa8.86□□□□□ -0.99
CDHR3-208ENST00000471910 PDE4CQ08493 712 aa8.86□□□□□ -0.99
CDHR3-208ENST00000471910 CRTC2Q53ET0 693 aaPredicted RBP8.86□□□□□ -0.99
CDHR3-208ENST00000471910 ANKMY2Q8IV38 441 aa8.86□□□□□ -0.99
CDHR3-208ENST00000471910 SIX5Q8N196 739 aa8.86□□□□□ -0.99
CDHR3-208ENST00000471910 LINC00528Q8N1L1 170 aa8.86□□□□□ -0.99
CDHR3-208ENST00000471910 ZNF395Q9H8N7 513 aaPredicted RBP8.86□□□□□ -0.99
CDHR3-208ENST00000471910 ARHGEF10LQ9HCE6 1279 aa8.86□□□□□ -0.99
CDHR3-208ENST00000471910 NOVA2Q9UNW9 492 aaKnown RBP8.86□□□□□ -0.99
CDHR3-208ENST00000471910 A0A1W2PRU2 124 aa8.85□□□□□ -0.99
CDHR3-208ENST00000471910 AAASQ9NRG9 546 aa8.85□□□□□ -0.99
CDHR3-208ENST00000471910 MEN1O00255 615 aa8.84□□□□□ -0.99
CDHR3-208ENST00000471910 WASLO00401 505 aaPredicted RBP8.84□□□□□ -0.99
CDHR3-208ENST00000471910 INHAP05111 366 aa8.84□□□□□ -0.99
CDHR3-208ENST00000471910 DPYDQ12882 1025 aa8.84□□□□□ -0.99
CDHR3-208ENST00000471910 C6orf118Q5T5N4 469 aa8.84□□□□□ -0.99
CDHR3-208ENST00000471910 XAGE2Q96GT9 111 aa8.84□□□□□ -0.99
CDHR3-208ENST00000471910 ETNK1Q9HBU6 452 aa8.84□□□□□ -0.99
CDHR3-208ENST00000471910 RAB6BQ9NRW1 208 aa8.84□□□□□ -0.99
CDHR3-208ENST00000471910 KIAA1024Q9UPX6 916 aa8.84□□□□□ -0.99
CDHR3-208ENST00000471910 GTF2E1P29083 439 aaPredicted RBP8.83□□□□□ -1
CDHR3-208ENST00000471910 CLN3Q13286 438 aa8.83□□□□□ -1
CDHR3-208ENST00000471910 KDF1Q8NAX2 398 aaPredicted RBP8.83□□□□□ -1
CDHR3-208ENST00000471910 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.83□□□□□ -1
CDHR3-208ENST00000471910 CNKSR1Q969H4 720 aa8.83□□□□□ -1
CDHR3-208ENST00000471910 ESYT1Q9BSJ8 1104 aa8.83□□□□□ -1
CDHR3-208ENST00000471910 M0R2N6 131 aa8.82□□□□□ -1
CDHR3-208ENST00000471910 ST8SIA5O15466 376 aa8.82□□□□□ -1
CDHR3-208ENST00000471910 SPINT1O43278 529 aa8.82□□□□□ -1
CDHR3-208ENST00000471910 SCNN1DP51172 638 aa8.82□□□□□ -1
CDHR3-208ENST00000471910 PURBQ96QR8 312 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms