RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 RTL1A6NKG5 1358 aa13.33□□□□□ -0.28
APLF-204ENST00000471727 USP54Q70EL1 1684 aa13.32□□□□□ -0.28
APLF-204ENST00000471727 RPAP2Q8IXW5 612 aaPredicted RBP13.32□□□□□ -0.28
APLF-204ENST00000471727 SLC4A3P48751 1232 aa13.31□□□□□ -0.28
APLF-204ENST00000471727 NFKBIBQ15653 356 aa13.31□□□□□ -0.28
APLF-204ENST00000471727 EYA1Q99502 592 aa13.31□□□□□ -0.28
APLF-204ENST00000471727 C22orf23Q9BZE7 217 aa13.31□□□□□ -0.28
APLF-204ENST00000471727 FMN2Q9NZ56 1722 aa13.31□□□□□ -0.28
APLF-204ENST00000471727 TRHP20396 242 aaPredicted RBP13.31□□□□□ -0.28
APLF-204ENST00000471727 MTHFSDQ2M296 383 aaKnown RBP13.31□□□□□ -0.28
APLF-204ENST00000471727 ANKRD45Q5TZF3 282 aa13.31□□□□□ -0.28
APLF-204ENST00000471727 MCM10Q7L590 875 aa13.31□□□□□ -0.28
APLF-204ENST00000471727 CHMP4AQ9BY43 222 aa13.31□□□□□ -0.28
APLF-204ENST00000471727 HOXC9P31274 260 aa13.3□□□□□ -0.28
APLF-204ENST00000471727 PHF8Q9UPP1 1060 aa13.3□□□□□ -0.28
APLF-204ENST00000471727 ABTB2Q8N961 1025 aa13.29□□□□□ -0.28
APLF-204ENST00000471727 LNPKQ9C0E8 428 aa13.29□□□□□ -0.28
APLF-204ENST00000471727 DCTPP1Q9H773 170 aa13.29□□□□□ -0.28
APLF-204ENST00000471727 TSPYL4Q9UJ04 414 aa13.29□□□□□ -0.28
APLF-204ENST00000471727 PIK3C2AO00443 1686 aa13.29□□□□□ -0.28
APLF-204ENST00000471727 GNAT3A8MTJ3 354 aa13.28□□□□□ -0.28
APLF-204ENST00000471727 ANKRD44Q8N8A2 993 aa13.28□□□□□ -0.28
APLF-204ENST00000471727 SOX12O15370 315 aa13.28□□□□□ -0.28
APLF-204ENST00000471727 RBM25P49756 843 aaKnown RBP13.28□□□□□ -0.28
APLF-204ENST00000471727 CCT4P50991 539 aaKnown RBP13.28□□□□□ -0.28
APLF-204ENST00000471727 KCNH5Q8NCM2 988 aa13.28□□□□□ -0.28
APLF-204ENST00000471727 SIRT2Q8IXJ6 389 aa13.27□□□□□ -0.29
APLF-204ENST00000471727 ZNF142P52746 1687 aaPredicted RBP13.26□□□□□ -0.29
APLF-204ENST00000471727 HMMRO75330 724 aa13.26□□□□□ -0.29
APLF-204ENST00000471727 SLC4A2P04920 1241 aa13.26□□□□□ -0.29
APLF-204ENST00000471727 MFAP1P55081 439 aaKnown RBP13.26□□□□□ -0.29
APLF-204ENST00000471727 STK31Q9BXU1 1019 aa13.26□□□□□ -0.29
APLF-204ENST00000471727 RGS12O14924 1447 aa13.25□□□□□ -0.29
APLF-204ENST00000471727 ADGRL3Q9HAR2 1447 aa13.25□□□□□ -0.29
APLF-204ENST00000471727 CCDC30Q5VVM6 783 aa13.25□□□□□ -0.29
APLF-204ENST00000471727 IP6K1Q92551 441 aa13.25□□□□□ -0.29
APLF-204ENST00000471727 TBC1D2Q9BYX2 928 aa13.25□□□□□ -0.29
APLF-204ENST00000471727 CHD2O14647 1828 aaKnown RBP13.25□□□□□ -0.29
APLF-204ENST00000471727 C1orf115Q9H7X2 142 aa13.24□□□□□ -0.29
APLF-204ENST00000471727 MAP3K5Q99683 1374 aa13.24□□□□□ -0.29
APLF-204ENST00000471727 TAF7Q15545 349 aaPredicted RBP13.24□□□□□ -0.29
APLF-204ENST00000471727 SNX21Q969T3 373 aa13.24□□□□□ -0.29
APLF-204ENST00000471727 RGPD8O14715 1765 aaPredicted RBP13.23□□□□□ -0.29
APLF-204ENST00000471727 FOXO3O43524 673 aa13.23□□□□□ -0.29
APLF-204ENST00000471727 CEP85Q6P2H3 762 aa13.23□□□□□ -0.29
APLF-204ENST00000471727 HSCBQ8IWL3 235 aa13.23□□□□□ -0.29
APLF-204ENST00000471727 CDC45O75419 566 aa13.22□□□□□ -0.29
APLF-204ENST00000471727 PSME1Q06323 249 aa13.22□□□□□ -0.29
APLF-204ENST00000471727 GSE1Q14687 1217 aa13.22□□□□□ -0.29
APLF-204ENST00000471727 KRT24Q2M2I5 525 aa13.22□□□□□ -0.29
APLF-204ENST00000471727 ANTXR1Q9H6X2 564 aa13.22□□□□□ -0.29
APLF-204ENST00000471727 SETD1BQ9UPS6 1966 aaKnown RBP13.22□□□□□ -0.29
APLF-204ENST00000471727 GNAI3P08754 354 aa13.21□□□□□ -0.29
APLF-204ENST00000471727 NPHP4O75161 1426 aaPredicted RBP13.21□□□□□ -0.29
APLF-204ENST00000471727 ATP10DQ9P241 1426 aa13.21□□□□□ -0.29
APLF-204ENST00000471727 NWD1Q149M9 1564 aa13.21□□□□□ -0.29
APLF-204ENST00000471727 LRRC37A3O60309 1634 aa13.21□□□□□ -0.29
APLF-204ENST00000471727 HOXB7P09629 217 aa13.21□□□□□ -0.3
APLF-204ENST00000471727 PLEKHM2Q8IWE5 1019 aa13.21□□□□□ -0.3
APLF-204ENST00000471727 ADAMTSL3P82987 1691 aa13.2□□□□□ -0.3
APLF-204ENST00000471727 MSH6P52701 1360 aa13.2□□□□□ -0.3
APLF-204ENST00000471727 GNAI2P04899 355 aa13.2□□□□□ -0.3
APLF-204ENST00000471727 C14orf37Q86TY3 774 aa13.2□□□□□ -0.3
APLF-204ENST00000471727 CHMP5Q9NZZ3 219 aa13.2□□□□□ -0.3
APLF-204ENST00000471727 ESCO1Q5FWF5 840 aa13.19□□□□□ -0.3
APLF-204ENST00000471727 NUTM2GQ5VZR2 741 aa13.19□□□□□ -0.3
APLF-204ENST00000471727 CASC1Q6TDU7 716 aa13.19□□□□□ -0.3
APLF-204ENST00000471727 IL17REQ8NFR9 667 aa13.19□□□□□ -0.3
APLF-204ENST00000471727 MIS18AQ9NYP9 233 aa13.19□□□□□ -0.3
APLF-204ENST00000471727 MARF1Q9Y4F3 1742 aaKnown RBP13.19□□□□□ -0.3
APLF-204ENST00000471727 FRAT2O75474 233 aaPredicted RBP13.18□□□□□ -0.3
APLF-204ENST00000471727 FLIIQ13045 1269 aa13.18□□□□□ -0.3
APLF-204ENST00000471727 AMOTQ4VCS5 1084 aa13.18□□□□□ -0.3
APLF-204ENST00000471727 TTC22Q5TAA0 569 aa13.18□□□□□ -0.3
APLF-204ENST00000471727 TBC1D9Q6ZT07 1266 aa13.18□□□□□ -0.3
APLF-204ENST00000471727 MEIS3Q99687 375 aa13.18□□□□□ -0.3
APLF-204ENST00000471727 NFAT5O94916 1531 aa13.18□□□□□ -0.3
APLF-204ENST00000471727 PXDNLA1KZ92 1463 aa13.18□□□□□ -0.3
APLF-204ENST00000471727 CEMIPQ8WUJ3 1361 aa13.18□□□□□ -0.3
APLF-204ENST00000471727 PHRF1Q9P1Y6 1649 aaKnown RBP13.17□□□□□ -0.3
APLF-204ENST00000471727 PLEKHO1Q53GL0 409 aaPredicted RBP13.17□□□□□ -0.3
APLF-204ENST00000471727 LTV1Q96GA3 475 aaPredicted RBP13.17□□□□□ -0.3
APLF-204ENST00000471727 SLKQ9H2G2 1235 aaPredicted RBP13.17□□□□□ -0.3
APLF-204ENST00000471727 OSBPL3Q9H4L5 887 aa13.17□□□□□ -0.3
APLF-204ENST00000471727 CIZ1Q9ULV3 898 aaPredicted RBP13.17□□□□□ -0.3
APLF-204ENST00000471727 FKBP5Q13451 457 aaPredicted RBP13.16□□□□□ -0.3
APLF-204ENST00000471727 AKAP4Q5JQC9 854 aa13.16□□□□□ -0.3
APLF-204ENST00000471727 SLC4A10Q6U841 1118 aa13.16□□□□□ -0.3
APLF-204ENST00000471727 G2E3Q7L622 706 aa13.16□□□□□ -0.3
APLF-204ENST00000471727 OVOS2A0A0G2JMS6 1433 aa13.15□□□□□ -0.3
APLF-204ENST00000471727 GSPT1P15170 499 aaKnown RBP13.14□□□□□ -0.31
APLF-204ENST00000471727 ATP8B2P98198 1209 aa13.14□□□□□ -0.31
APLF-204ENST00000471727 NBPF6Q5VWK0 638 aa13.14□□□□□ -0.31
APLF-204ENST00000471727 ARHGEF25Q86VW2 580 aa13.14□□□□□ -0.31
APLF-204ENST00000471727 NBPF4Q96M43 638 aa13.14□□□□□ -0.31
APLF-204ENST00000471727 MST1RQ04912 1400 aa13.14□□□□□ -0.31
APLF-204ENST00000471727 NCAPD2Q15021 1401 aa13.14□□□□□ -0.31
APLF-204ENST00000471727 SLIT3O75094 1523 aa13.14□□□□□ -0.31
APLF-204ENST00000471727 CACNA1FO60840 1977 aa13.14□□□□□ -0.31
APLF-204ENST00000471727 NCOA3Q9Y6Q9 1424 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms