RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 C1orf167Q5SNV9 1468 aa23.54■■□□□ 1.36
COL20A1-205ENST00000471582 KIF1AQ12756 1690 aa23.54■■□□□ 1.36
COL20A1-205ENST00000471582 ATF3P18847 181 aa23.53■■□□□ 1.36
COL20A1-205ENST00000471582 AMPHP49418 695 aa23.53■■□□□ 1.36
COL20A1-205ENST00000471582 PSME1Q06323 249 aa23.53■■□□□ 1.36
COL20A1-205ENST00000471582 CRB1P82279 1406 aa23.53■■□□□ 1.36
COL20A1-205ENST00000471582 ZBTB7BO15156 539 aaPredicted RBP23.53■■□□□ 1.36
COL20A1-205ENST00000471582 USP19O94966 1318 aa23.52■■□□□ 1.36
COL20A1-205ENST00000471582 MST1RQ04912 1400 aa23.52■■□□□ 1.35
COL20A1-205ENST00000471582 ELL2O00472 640 aaPredicted RBP23.51■■□□□ 1.35
COL20A1-205ENST00000471582 XIRP1Q702N8 1843 aaKnown RBP23.51■■□□□ 1.35
COL20A1-205ENST00000471582 ORAI2Q96SN7 254 aa23.51■■□□□ 1.35
COL20A1-205ENST00000471582 MSH6P52701 1360 aa23.5■■□□□ 1.35
COL20A1-205ENST00000471582 CADPS2Q86UW7 1296 aa23.5■■□□□ 1.35
COL20A1-205ENST00000471582 RTL1A6NKG5 1358 aa23.5■■□□□ 1.35
COL20A1-205ENST00000471582 MCM10Q7L590 875 aa23.49■■□□□ 1.35
COL20A1-205ENST00000471582 NUTM2GQ5VZR2 741 aa23.49■■□□□ 1.35
COL20A1-205ENST00000471582 GAS2L2Q8NHY3 880 aa23.49■■□□□ 1.35
COL20A1-205ENST00000471582 EYA1Q99502 592 aa23.49■■□□□ 1.35
COL20A1-205ENST00000471582 DAXXQ9UER7 740 aaPredicted RBP23.49■■□□□ 1.35
COL20A1-205ENST00000471582 ZNF335Q9H4Z2 1342 aaPredicted RBP23.48■■□□□ 1.35
COL20A1-205ENST00000471582 LRRC37A3O60309 1634 aa23.47■■□□□ 1.35
COL20A1-205ENST00000471582 HOXC9P31274 260 aa23.47■■□□□ 1.35
COL20A1-205ENST00000471582 NBR1Q14596 966 aa23.47■■□□□ 1.35
COL20A1-205ENST00000471582 HTATSF1O43719 755 aaKnown RBP23.47■■□□□ 1.35
COL20A1-205ENST00000471582 NUCB1Q02818 461 aa23.47■■□□□ 1.35
COL20A1-205ENST00000471582 MTHFSDQ2M296 383 aaKnown RBP23.47■■□□□ 1.35
COL20A1-205ENST00000471582 SEC24BO95487 1268 aa23.46■■□□□ 1.35
COL20A1-205ENST00000471582 RTF1Q92541 710 aaKnown RBP23.46■■□□□ 1.35
COL20A1-205ENST00000471582 UPF2Q9HAU5 1272 aaKnown RBP23.46■■□□□ 1.35
COL20A1-205ENST00000471582 GCC1Q96CN9 775 aa23.45■■□□□ 1.35
COL20A1-205ENST00000471582 LTN1O94822 1766 aa23.44■■□□□ 1.34
COL20A1-205ENST00000471582 FOXO3O43524 673 aa23.44■■□□□ 1.34
COL20A1-205ENST00000471582 PTPRCP08575 1304 aa23.43■■□□□ 1.34
COL20A1-205ENST00000471582 INTS3Q68E01 1043 aaKnown RBP23.43■■□□□ 1.34
COL20A1-205ENST00000471582 KCNH5Q8NCM2 988 aa23.43■■□□□ 1.34
COL20A1-205ENST00000471582 USP35Q9P2H5 1018 aa23.43■■□□□ 1.34
COL20A1-205ENST00000471582 RGS12O14924 1447 aa23.43■■□□□ 1.34
COL20A1-205ENST00000471582 RTL5Q5HYW3 569 aaPredicted RBP23.42■■□□□ 1.34
COL20A1-205ENST00000471582 TRPM3Q9HCF6 1732 aaPredicted RBP23.42■■□□□ 1.34
COL20A1-205ENST00000471582 NFAT5O94916 1531 aa23.42■■□□□ 1.34
COL20A1-205ENST00000471582 PHRF1Q9P1Y6 1649 aaKnown RBP23.41■■□□□ 1.34
COL20A1-205ENST00000471582 CHD1LQ86WJ1 897 aa23.41■■□□□ 1.34
COL20A1-205ENST00000471582 TBC1D32Q96NH3 1257 aa23.41■■□□□ 1.34
COL20A1-205ENST00000471582 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
COL20A1-205ENST00000471582 KRT24Q2M2I5 525 aa23.39■■□□□ 1.33
COL20A1-205ENST00000471582 KRT28Q7Z3Y7 464 aa23.38■■□□□ 1.33
COL20A1-205ENST00000471582 TSPYL4Q9UJ04 414 aa23.38■■□□□ 1.33
COL20A1-205ENST00000471582 SIRT2Q8IXJ6 389 aa23.36■■□□□ 1.33
COL20A1-205ENST00000471582 MAP3K5Q99683 1374 aa23.36■■□□□ 1.33
COL20A1-205ENST00000471582 GNAT3A8MTJ3 354 aa23.35■■□□□ 1.33
COL20A1-205ENST00000471582 SLC4A3P48751 1232 aa23.35■■□□□ 1.33
COL20A1-205ENST00000471582 XPCQ01831 940 aaPredicted RBP23.35■■□□□ 1.33
COL20A1-205ENST00000471582 BECN1Q14457 450 aa23.35■■□□□ 1.33
COL20A1-205ENST00000471582 C1orf115Q9H7X2 142 aa23.35■■□□□ 1.33
COL20A1-205ENST00000471582 BABAM1Q9NWV8 329 aa23.35■■□□□ 1.33
COL20A1-205ENST00000471582 SOS1Q07889 1333 aaPredicted RBP23.35■■□□□ 1.33
COL20A1-205ENST00000471582 IP6K1Q92551 441 aa23.35■■□□□ 1.33
COL20A1-205ENST00000471582 LNPKQ9C0E8 428 aa23.35■■□□□ 1.33
COL20A1-205ENST00000471582 SLIT3O75094 1523 aa23.35■■□□□ 1.33
COL20A1-205ENST00000471582 NPHP3Q7Z494 1330 aa23.35■■□□□ 1.33
COL20A1-205ENST00000471582 ALS2Q96Q42 1657 aa23.33■■□□□ 1.33
COL20A1-205ENST00000471582 BMP2KLQ5H9B9 411 aa23.32■■□□□ 1.32
COL20A1-205ENST00000471582 LMOD2Q6P5Q4 547 aa23.32■■□□□ 1.32
COL20A1-205ENST00000471582 ATP10DQ9P241 1426 aa23.31■■□□□ 1.32
COL20A1-205ENST00000471582 SLC4A2P04920 1241 aa23.31■■□□□ 1.32
COL20A1-205ENST00000471582 ANKRD45Q5TZF3 282 aa23.31■■□□□ 1.32
COL20A1-205ENST00000471582 MIS18AQ9NYP9 233 aa23.31■■□□□ 1.32
COL20A1-205ENST00000471582 FAM208AQ9UK61 1670 aaKnown RBP23.3■■□□□ 1.32
COL20A1-205ENST00000471582 GCP02774 474 aa23.3■■□□□ 1.32
COL20A1-205ENST00000471582 RPAP2Q8IXW5 612 aaPredicted RBP23.29■■□□□ 1.32
COL20A1-205ENST00000471582 LTV1Q96GA3 475 aaPredicted RBP23.29■■□□□ 1.32
COL20A1-205ENST00000471582 ANKRD44Q8N8A2 993 aa23.29■■□□□ 1.32
COL20A1-205ENST00000471582 PXDNQ92626 1479 aa23.28■■□□□ 1.32
COL20A1-205ENST00000471582 BRINP3Q76B58 766 aa23.28■■□□□ 1.32
COL20A1-205ENST00000471582 SLAIN2Q9P270 581 aa23.28■■□□□ 1.32
COL20A1-205ENST00000471582 DCTPP1Q9H773 170 aa23.27■■□□□ 1.32
COL20A1-205ENST00000471582 CACNA1FO60840 1977 aa23.27■■□□□ 1.32
COL20A1-205ENST00000471582 LTBP4Q8N2S1 1624 aa23.27■■□□□ 1.32
COL20A1-205ENST00000471582 ZBTB7CA1YPR0 619 aa23.26■■□□□ 1.31
COL20A1-205ENST00000471582 IL17REQ8NFR9 667 aa23.26■■□□□ 1.31
COL20A1-205ENST00000471582 STK31Q9BXU1 1019 aa23.26■■□□□ 1.31
COL20A1-205ENST00000471582 C22orf23Q9BZE7 217 aa23.26■■□□□ 1.31
COL20A1-205ENST00000471582 MED1Q15648 1581 aaPredicted RBP23.26■■□□□ 1.31
COL20A1-205ENST00000471582 CCT4P50991 539 aaKnown RBP23.25■■□□□ 1.31
COL20A1-205ENST00000471582 TAF7Q15545 349 aaPredicted RBP23.25■■□□□ 1.31
COL20A1-205ENST00000471582 ARHGEF25Q86VW2 580 aa23.25■■□□□ 1.31
COL20A1-205ENST00000471582 TNS3Q68CZ2 1445 aa23.25■■□□□ 1.31
COL20A1-205ENST00000471582 CEMIPQ8WUJ3 1361 aa23.25■■□□□ 1.31
COL20A1-205ENST00000471582 CCDC30Q5VVM6 783 aa23.25■■□□□ 1.31
COL20A1-205ENST00000471582 DDX17Q92841 729 aaKnown RBP23.25■■□□□ 1.31
COL20A1-205ENST00000471582 NCAPD2Q15021 1401 aa23.24■■□□□ 1.31
COL20A1-205ENST00000471582 DEKP35659 375 aaKnown RBP23.24■■□□□ 1.31
COL20A1-205ENST00000471582 MFAP1P55081 439 aaKnown RBP23.23■■□□□ 1.31
COL20A1-205ENST00000471582 CEP85Q6P2H3 762 aa23.23■■□□□ 1.31
COL20A1-205ENST00000471582 N4BP2Q86UW6 1770 aaPredicted RBP23.23■■□□□ 1.31
COL20A1-205ENST00000471582 NBPF6Q5VWK0 638 aa23.22■■□□□ 1.31
COL20A1-205ENST00000471582 NBPF4Q96M43 638 aa23.22■■□□□ 1.31
COL20A1-205ENST00000471582 LMO7Q8WWI1 1683 aa23.22■■□□□ 1.31
COL20A1-205ENST00000471582 NFKBIBQ15653 356 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms