RNA–Protein interactions for RNA: ENST00000471462.2

SUSD3-204, Transcript of sushi domain containing 3, humanhuman

TSL 3

Gene SUSD3, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-204ENST00000471462 ANKRD36BQ8N2N9 1353 aa13.5□□□□□ -0.25
SUSD3-204ENST00000471462 NME9Q86XW9 330 aa13.5□□□□□ -0.25
SUSD3-204ENST00000471462 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.5□□□□□ -0.25
SUSD3-204ENST00000471462 USP54Q70EL1 1684 aa13.5□□□□□ -0.25
SUSD3-204ENST00000471462 SYTL4Q96C24 671 aaPredicted RBP13.49□□□□□ -0.25
SUSD3-204ENST00000471462 CD2APQ9Y5K6 639 aa13.49□□□□□ -0.25
SUSD3-204ENST00000471462 SBNO2Q9Y2G9 1366 aa13.48□□□□□ -0.25
SUSD3-204ENST00000471462 LY75O60449 1722 aa13.48□□□□□ -0.25
SUSD3-204ENST00000471462 CCNL1Q9UK58 526 aaPredicted RBP13.48□□□□□ -0.25
SUSD3-204ENST00000471462 MON2Q7Z3U7 1717 aa13.47□□□□□ -0.25
SUSD3-204ENST00000471462 MSL1Q68DK7 614 aa13.47□□□□□ -0.25
SUSD3-204ENST00000471462 ZNF526Q8TF50 670 aaPredicted RBP13.47□□□□□ -0.25
SUSD3-204ENST00000471462 KAT6BQ8WYB5 2073 aa13.47□□□□□ -0.25
SUSD3-204ENST00000471462 LTN1O94822 1766 aa13.47□□□□□ -0.25
SUSD3-204ENST00000471462 CD163L1Q9NR16 1453 aa13.47□□□□□ -0.25
SUSD3-204ENST00000471462 IP6K1Q92551 441 aa13.46□□□□□ -0.25
SUSD3-204ENST00000471462 L3MBTL2Q969R5 705 aa13.45□□□□□ -0.26
SUSD3-204ENST00000471462 SIN3AQ96ST3 1273 aa13.45□□□□□ -0.26
SUSD3-204ENST00000471462 KIF3CO14782 793 aa13.44□□□□□ -0.26
SUSD3-204ENST00000471462 DOT1LQ8TEK3 1739 aa13.44□□□□□ -0.26
SUSD3-204ENST00000471462 ZCRB1Q8TBF4 217 aaKnown RBP13.43□□□□□ -0.26
SUSD3-204ENST00000471462 USP47Q96K76 1375 aa13.43□□□□□ -0.26
SUSD3-204ENST00000471462 NEUROD1Q13562 356 aa13.42□□□□□ -0.26
SUSD3-204ENST00000471462 FLAD1Q8NFF5 587 aa13.42□□□□□ -0.26
SUSD3-204ENST00000471462 LTV1Q96GA3 475 aaPredicted RBP13.42□□□□□ -0.26
SUSD3-204ENST00000471462 ROCK2O75116 1388 aaKnown RBP13.42□□□□□ -0.26
SUSD3-204ENST00000471462 EDC4Q6P2E9 1401 aaKnown RBP13.41□□□□□ -0.26
SUSD3-204ENST00000471462 DNAJC5GQ8N7S2 189 aa13.41□□□□□ -0.26
SUSD3-204ENST00000471462 SLC12A5Q9H2X9 1139 aa13.41□□□□□ -0.26
SUSD3-204ENST00000471462 FAM208AQ9UK61 1670 aaKnown RBP13.4□□□□□ -0.26
SUSD3-204ENST00000471462 MEGF6O75095 1541 aa13.4□□□□□ -0.26
SUSD3-204ENST00000471462 APLP1P51693 650 aa13.4□□□□□ -0.26
SUSD3-204ENST00000471462 HDGFL2Q7Z4V5 671 aaPredicted RBP13.4□□□□□ -0.26
SUSD3-204ENST00000471462 IGSF1Q8N6C5 1336 aa13.39□□□□□ -0.27
SUSD3-204ENST00000471462 HOXC9P31274 260 aa13.39□□□□□ -0.27
SUSD3-204ENST00000471462 TMC1Q8TDI8 760 aa13.39□□□□□ -0.27
SUSD3-204ENST00000471462 MAP3K19Q56UN5 1328 aa13.39□□□□□ -0.27
SUSD3-204ENST00000471462 AMIGO3Q86WK7 504 aa13.38□□□□□ -0.27
SUSD3-204ENST00000471462 WWC3Q9ULE0 1092 aa13.38□□□□□ -0.27
SUSD3-204ENST00000471462 C5P01031 1676 aa13.37□□□□□ -0.27
SUSD3-204ENST00000471462 A0A1W2PP64 1363 aa13.37□□□□□ -0.27
SUSD3-204ENST00000471462 HMGB2P26583 209 aaKnown RBP13.37□□□□□ -0.27
SUSD3-204ENST00000471462 TERF2IPQ9NYB0 399 aa13.37□□□□□ -0.27
SUSD3-204ENST00000471462 NBPF6Q5VWK0 638 aa13.36□□□□□ -0.27
SUSD3-204ENST00000471462 CCER1Q8TC90 406 aaPredicted RBP13.36□□□□□ -0.27
SUSD3-204ENST00000471462 NBPF4Q96M43 638 aa13.36□□□□□ -0.27
SUSD3-204ENST00000471462 CGNL1Q0VF96 1302 aa13.36□□□□□ -0.27
SUSD3-204ENST00000471462 PALLDQ8WX93 1383 aa13.35□□□□□ -0.27
SUSD3-204ENST00000471462 TOMM70O94826 608 aa13.35□□□□□ -0.27
SUSD3-204ENST00000471462 FBLN1P23142 703 aa13.35□□□□□ -0.27
SUSD3-204ENST00000471462 AMPHP49418 695 aa13.35□□□□□ -0.27
SUSD3-204ENST00000471462 PCNTO95613 3336 aa13.34□□□□□ -0.27
SUSD3-204ENST00000471462 SMIM5Q71RC9 77 aa13.34□□□□□ -0.27
SUSD3-204ENST00000471462 CICQ96RK0 1608 aaPredicted RBP13.34□□□□□ -0.27
SUSD3-204ENST00000471462 TAF1LQ8IZX4 1826 aa13.34□□□□□ -0.27
SUSD3-204ENST00000471462 C4BP0C0L5 1744 aa13.33□□□□□ -0.27
SUSD3-204ENST00000471462 TOGARAM1Q9Y4F4 1720 aa13.33□□□□□ -0.27
SUSD3-204ENST00000471462 RGPD2P0DJD1 1756 aa13.33□□□□□ -0.28
SUSD3-204ENST00000471462 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.33□□□□□ -0.28
SUSD3-204ENST00000471462 HOXD11P31277 338 aaPredicted RBP13.33□□□□□ -0.28
SUSD3-204ENST00000471462 USHBP1Q8N6Y0 703 aa13.33□□□□□ -0.28
SUSD3-204ENST00000471462 COG3Q96JB2 828 aa13.33□□□□□ -0.28
SUSD3-204ENST00000471462 AK7Q96M32 723 aa13.33□□□□□ -0.28
SUSD3-204ENST00000471462 PUS7Q96PZ0 661 aaKnown RBP13.33□□□□□ -0.28
SUSD3-204ENST00000471462 PHF14O94880 888 aa13.32□□□□□ -0.28
SUSD3-204ENST00000471462 MPRIPQ6WCQ1 1025 aa13.32□□□□□ -0.28
SUSD3-204ENST00000471462 RAPGEF4Q8WZA2 1011 aa13.32□□□□□ -0.28
SUSD3-204ENST00000471462 SSFA2P28290 1259 aa13.31□□□□□ -0.28
SUSD3-204ENST00000471462 COL13A1Q5TAT6 717 aaPredicted RBP13.31□□□□□ -0.28
SUSD3-204ENST00000471462 SMARCC1Q92922 1105 aaPredicted RBP13.31□□□□□ -0.28
SUSD3-204ENST00000471462 PCDH11XQ9BZA7 1347 aa13.31□□□□□ -0.28
SUSD3-204ENST00000471462 PCDH11YQ9BZA8 1340 aa13.31□□□□□ -0.28
SUSD3-204ENST00000471462 RTL1A6NKG5 1358 aa13.31□□□□□ -0.28
SUSD3-204ENST00000471462 NSD3Q9BZ95 1437 aa13.3□□□□□ -0.28
SUSD3-204ENST00000471462 CYP27B1O15528 508 aa13.3□□□□□ -0.28
SUSD3-204ENST00000471462 TATP17735 454 aaPredicted RBP13.3□□□□□ -0.28
SUSD3-204ENST00000471462 NMRK2Q9NPI5 230 aa13.3□□□□□ -0.28
SUSD3-204ENST00000471462 UBR3Q6ZT12 1888 aa13.29□□□□□ -0.28
SUSD3-204ENST00000471462 JMYQ8N9B5 988 aa13.29□□□□□ -0.28
SUSD3-204ENST00000471462 PIGBQ92521 554 aa13.29□□□□□ -0.28
SUSD3-204ENST00000471462 CARD11Q9BXL7 1154 aa13.29□□□□□ -0.28
SUSD3-204ENST00000471462 PXDNLA1KZ92 1463 aa13.29□□□□□ -0.28
SUSD3-204ENST00000471462 RRS1Q15050 365 aaKnown RBP13.28□□□□□ -0.28
SUSD3-204ENST00000471462 LINC00116Q8NCU8 138 aa13.28□□□□□ -0.28
SUSD3-204ENST00000471462 RBM46Q8TBY0 533 aaKnown RBP13.28□□□□□ -0.28
SUSD3-204ENST00000471462 KLRG1Q96E93 195 aa13.28□□□□□ -0.28
SUSD3-204ENST00000471462 TGFB2P61812 414 aa13.27□□□□□ -0.29
SUSD3-204ENST00000471462 HTRA3P83110 453 aa13.27□□□□□ -0.29
SUSD3-204ENST00000471462 LOC102724428A0A0B4J2F2 783 aa13.26□□□□□ -0.29
SUSD3-204ENST00000471462 A0A0G2JLW4 131 aa13.26□□□□□ -0.29
SUSD3-204ENST00000471462 MMP10P09238 476 aa13.26□□□□□ -0.29
SUSD3-204ENST00000471462 SIK1P57059 783 aa13.26□□□□□ -0.29
SUSD3-204ENST00000471462 NKX1-1Q15270 411 aaPredicted RBP13.26□□□□□ -0.29
SUSD3-204ENST00000471462 SMG6Q86US8 1419 aaKnown RBP13.26□□□□□ -0.29
SUSD3-204ENST00000471462 TONSLQ96HA7 1378 aa13.26□□□□□ -0.29
SUSD3-204ENST00000471462 WDR90Q96KV7 1748 aa13.26□□□□□ -0.29
SUSD3-204ENST00000471462 KIAA1551Q9HCM1 1747 aa13.26□□□□□ -0.29
SUSD3-204ENST00000471462 BCS1LQ9Y276 419 aa13.26□□□□□ -0.29
SUSD3-204ENST00000471462 MAP2P11137 1827 aaKnown RBP13.25□□□□□ -0.29
SUSD3-204ENST00000471462 INSRP06213 1382 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms