RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 AGLP35573 1532 aa13.89□□□□□ -0.19
SRGAP3-204ENST00000470951 MRPL50Q8N5N7 158 aaKnown RBP13.89□□□□□ -0.19
SRGAP3-204ENST00000470951 TERF2IPQ9NYB0 399 aa13.89□□□□□ -0.19
SRGAP3-204ENST00000470951 CFAP65Q6ZU64 1925 aaKnown RBP13.89□□□□□ -0.19
SRGAP3-204ENST00000470951 CAMSAP1Q5T5Y3 1602 aa13.89□□□□□ -0.19
SRGAP3-204ENST00000470951 KIF20BQ96Q89 1820 aa13.89□□□□□ -0.19
SRGAP3-204ENST00000470951 LRRC7Q96NW7 1537 aa13.89□□□□□ -0.19
SRGAP3-204ENST00000470951 MCTP1Q6DN14 999 aa13.89□□□□□ -0.19
SRGAP3-204ENST00000470951 FAM135BQ49AJ0 1406 aa13.88□□□□□ -0.19
SRGAP3-204ENST00000470951 CAVIN1Q6NZI2 390 aaKnown RBP13.88□□□□□ -0.19
SRGAP3-204ENST00000470951 ZKSCAN5Q9Y2L8 839 aa13.87□□□□□ -0.19
SRGAP3-204ENST00000470951 NEXMIFQ5QGS0 1516 aa13.87□□□□□ -0.19
SRGAP3-204ENST00000470951 VAMP4O75379 141 aa13.87□□□□□ -0.19
SRGAP3-204ENST00000470951 SIRT2Q8IXJ6 389 aa13.87□□□□□ -0.19
SRGAP3-204ENST00000470951 SECISBP2LQ93073 1101 aaKnown RBP13.87□□□□□ -0.19
SRGAP3-204ENST00000470951 CABP2Q9NPB3 220 aa13.87□□□□□ -0.19
SRGAP3-204ENST00000470951 FYB1O15117 783 aa13.86□□□□□ -0.19
SRGAP3-204ENST00000470951 ST18O60284 1047 aa13.86□□□□□ -0.19
SRGAP3-204ENST00000470951 INTS3Q68E01 1043 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-204ENST00000470951 USP26Q9BXU7 913 aa13.86□□□□□ -0.19
SRGAP3-204ENST00000470951 GGNBP2Q9H3C7 697 aa13.86□□□□□ -0.19
SRGAP3-204ENST00000470951 DYNC1I1O14576 645 aa13.86□□□□□ -0.19
SRGAP3-204ENST00000470951 GNAI1P63096 354 aa13.86□□□□□ -0.19
SRGAP3-204ENST00000470951 PPP4R3BQ5MIZ7 849 aa13.86□□□□□ -0.19
SRGAP3-204ENST00000470951 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.86□□□□□ -0.19
SRGAP3-204ENST00000470951 PLEKHM2Q8IWE5 1019 aa13.86□□□□□ -0.19
SRGAP3-204ENST00000470951 API5Q9BZZ5 524 aaKnown RBP13.86□□□□□ -0.19
SRGAP3-204ENST00000470951 RBSNQ9H1K0 784 aa13.86□□□□□ -0.19
SRGAP3-204ENST00000470951 CCDC39Q9UFE4 941 aa13.86□□□□□ -0.19
SRGAP3-204ENST00000470951 ZHX1Q9UKY1 873 aaPredicted RBP13.86□□□□□ -0.19
SRGAP3-204ENST00000470951 TTC22Q5TAA0 569 aa13.85□□□□□ -0.19
SRGAP3-204ENST00000470951 CASC1Q6TDU7 716 aa13.85□□□□□ -0.19
SRGAP3-204ENST00000470951 IFT57Q9NWB7 429 aa13.85□□□□□ -0.19
SRGAP3-204ENST00000470951 GSPT1P15170 499 aaKnown RBP13.85□□□□□ -0.19
SRGAP3-204ENST00000470951 LRSAM1Q6UWE0 723 aa13.85□□□□□ -0.19
SRGAP3-204ENST00000470951 DCTPP1Q9H773 170 aa13.85□□□□□ -0.19
SRGAP3-204ENST00000470951 R3HCC1Q9Y3T6 440 aaKnown RBP13.85□□□□□ -0.19
SRGAP3-204ENST00000470951 ABCC3O15438 1527 aa13.84□□□□□ -0.19
SRGAP3-204ENST00000470951 CD163L1Q9NR16 1453 aa13.84□□□□□ -0.19
SRGAP3-204ENST00000470951 KDM4FA0A1W2PPD8 638 aa13.84□□□□□ -0.19
SRGAP3-204ENST00000470951 KIF20AO95235 890 aa13.84□□□□□ -0.19
SRGAP3-204ENST00000470951 MBD3O95983 291 aa13.84□□□□□ -0.19
SRGAP3-204ENST00000470951 PRIM1P49642 420 aaKnown RBP13.84□□□□□ -0.19
SRGAP3-204ENST00000470951 NFE2L2Q16236 605 aa13.84□□□□□ -0.19
SRGAP3-204ENST00000470951 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.84□□□□□ -0.19
SRGAP3-204ENST00000470951 ESF1Q9H501 851 aaKnown RBP13.83□□□□□ -0.2
SRGAP3-204ENST00000470951 RNF216Q9NWF9 866 aaPredicted RBP13.83□□□□□ -0.2
SRGAP3-204ENST00000470951 KNDC1Q76NI1 1749 aa13.83□□□□□ -0.2
SRGAP3-204ENST00000470951 SRPK2P78362 688 aaKnown RBP13.82□□□□□ -0.2
SRGAP3-204ENST00000470951 UQCRHLA0A096LP55 91 aa13.82□□□□□ -0.2
SRGAP3-204ENST00000470951 REC8O95072 547 aa13.82□□□□□ -0.2
SRGAP3-204ENST00000470951 UQCRHP07919 91 aa13.82□□□□□ -0.2
SRGAP3-204ENST00000470951 ZNF853P0CG23 659 aa13.82□□□□□ -0.2
SRGAP3-204ENST00000470951 CEBPAP49715 358 aaPredicted RBP13.82□□□□□ -0.2
SRGAP3-204ENST00000470951 PRKAR2BP31323 418 aa13.81□□□□□ -0.2
SRGAP3-204ENST00000470951 SASS6Q6UVJ0 657 aa13.81□□□□□ -0.2
SRGAP3-204ENST00000470951 HDGFL2Q7Z4V5 671 aaPredicted RBP13.81□□□□□ -0.2
SRGAP3-204ENST00000470951 FER1L4A9Z1Z3 1794 aa13.81□□□□□ -0.2
SRGAP3-204ENST00000470951 PRPF40AO75400 957 aaKnown RBP13.81□□□□□ -0.2
SRGAP3-204ENST00000470951 GPT2Q8TD30 523 aa13.81□□□□□ -0.2
SRGAP3-204ENST00000470951 ADAMTSL3P82987 1691 aa13.8□□□□□ -0.2
SRGAP3-204ENST00000470951 LMOD3Q0VAK6 560 aa13.8□□□□□ -0.2
SRGAP3-204ENST00000470951 FAM13BQ9NYF5 915 aa13.8□□□□□ -0.2
SRGAP3-204ENST00000470951 PTPRMP28827 1452 aa13.8□□□□□ -0.2
SRGAP3-204ENST00000470951 RPAP2Q8IXW5 612 aaPredicted RBP13.8□□□□□ -0.2
SRGAP3-204ENST00000470951 RIMS1Q86UR5 1692 aaKnown RBP13.8□□□□□ -0.2
SRGAP3-204ENST00000470951 MAP2P11137 1827 aaKnown RBP13.79□□□□□ -0.2
SRGAP3-204ENST00000470951 RAD21O60216 631 aa13.79□□□□□ -0.2
SRGAP3-204ENST00000470951 MCM2P49736 904 aa13.79□□□□□ -0.2
SRGAP3-204ENST00000470951 XPCQ01831 940 aaPredicted RBP13.79□□□□□ -0.2
SRGAP3-204ENST00000470951 KCTD17Q8N5Z5 321 aa13.79□□□□□ -0.2
SRGAP3-204ENST00000470951 DLG5Q8TDM6 1919 aa13.79□□□□□ -0.2
SRGAP3-204ENST00000470951 TWISTNBQ3B726 338 aaPredicted RBP13.79□□□□□ -0.2
SRGAP3-204ENST00000470951 TAF3Q5VWG9 929 aa13.79□□□□□ -0.2
SRGAP3-204ENST00000470951 ANKRD44Q8N8A2 993 aa13.79□□□□□ -0.2
SRGAP3-204ENST00000470951 ZDHHC9Q9Y397 364 aa13.79□□□□□ -0.2
SRGAP3-204ENST00000470951 SYAP1Q96A49 352 aaPredicted RBP13.78□□□□□ -0.2
SRGAP3-204ENST00000470951 TMEM63CQ9P1W3 806 aa13.78□□□□□ -0.2
SRGAP3-204ENST00000470951 ZSCAN20P17040 1043 aaPredicted RBP13.78□□□□□ -0.2
SRGAP3-204ENST00000470951 PKP1Q13835 747 aa13.78□□□□□ -0.2
SRGAP3-204ENST00000470951 TSPYL6Q8N831 410 aa13.78□□□□□ -0.2
SRGAP3-204ENST00000470951 RGS22Q8NE09 1264 aa13.78□□□□□ -0.2
SRGAP3-204ENST00000470951 MBIPQ9NS73 344 aa13.78□□□□□ -0.2
SRGAP3-204ENST00000470951 CPSF1Q10570 1443 aaKnown RBP13.77□□□□□ -0.2
SRGAP3-204ENST00000470951 FBXO31Q5XUX0 539 aaPredicted RBP13.77□□□□□ -0.21
SRGAP3-204ENST00000470951 PLCD3Q8N3E9 789 aa13.77□□□□□ -0.21
SRGAP3-204ENST00000470951 ATP10DQ9P241 1426 aa13.77□□□□□ -0.21
SRGAP3-204ENST00000470951 GTPBP4Q9BZE4 634 aaKnown RBP13.76□□□□□ -0.21
SRGAP3-204ENST00000470951 SYCE3A1L190 88 aa13.76□□□□□ -0.21
SRGAP3-204ENST00000470951 ERC2O15083 957 aa13.76□□□□□ -0.21
SRGAP3-204ENST00000470951 SDSP20132 328 aa13.76□□□□□ -0.21
SRGAP3-204ENST00000470951 ZGPATQ8N5A5 531 aaKnown RBP13.76□□□□□ -0.21
SRGAP3-204ENST00000470951 PHF14O94880 888 aa13.75□□□□□ -0.21
SRGAP3-204ENST00000470951 KIAA2012Q0VF49 1180 aa13.75□□□□□ -0.21
SRGAP3-204ENST00000470951 RBM27Q9P2N5 1060 aaKnown RBP13.75□□□□□ -0.21
SRGAP3-204ENST00000470951 ATP7BP35670 1465 aa13.75□□□□□ -0.21
SRGAP3-204ENST00000470951 YTHDC2Q9H6S0 1430 aaKnown RBP13.75□□□□□ -0.21
SRGAP3-204ENST00000470951 POLKQ9UBT6 870 aa13.75□□□□□ -0.21
SRGAP3-204ENST00000470951 CDK12Q9NYV4 1490 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-204ENST00000470951 LETM1O95202 739 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms