RNA–Protein interactions for RNA: ENST00000470819.2

CDKN2A-204, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 856 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-204ENST00000470819 SMG6Q86US8 1419 aaKnown RBP19.71■□□□□ 0.75
CDKN2A-204ENST00000470819 PTGER2P43116 358 aa19.71■□□□□ 0.75
CDKN2A-204ENST00000470819 RAPGEF4Q8WZA2 1011 aa19.71■□□□□ 0.75
CDKN2A-204ENST00000470819 FLT4P35916 1363 aa19.7■□□□□ 0.74
CDKN2A-204ENST00000470819 ZNF827Q17R98 1081 aa19.7■□□□□ 0.74
CDKN2A-204ENST00000470819 FAM208AQ9UK61 1670 aaKnown RBP19.7■□□□□ 0.74
CDKN2A-204ENST00000470819 PPM1GO15355 546 aaPredicted RBP19.69■□□□□ 0.74
CDKN2A-204ENST00000470819 HSPA5P11021 654 aaKnown RBP19.69■□□□□ 0.74
CDKN2A-204ENST00000470819 TATP17735 454 aaPredicted RBP19.69■□□□□ 0.74
CDKN2A-204ENST00000470819 KCNQ4P56696 695 aa19.69■□□□□ 0.74
CDKN2A-204ENST00000470819 EIF4G2P78344 907 aaKnown RBP eCLIP19.69■□□□□ 0.74
CDKN2A-204ENST00000470819 CGNL1Q0VF96 1302 aa19.69■□□□□ 0.74
CDKN2A-204ENST00000470819 CASZ1Q86V15 1759 aa19.68■□□□□ 0.74
CDKN2A-204ENST00000470819 PIAS4Q8N2W9 510 aaPredicted RBP19.68■□□□□ 0.74
CDKN2A-204ENST00000470819 KIF24Q5T7B8 1368 aa19.68■□□□□ 0.74
CDKN2A-204ENST00000470819 SLC27A3Q5K4L6 730 aa19.67■□□□□ 0.74
CDKN2A-204ENST00000470819 MTFR1LQ9H019 292 aa19.67■□□□□ 0.74
CDKN2A-204ENST00000470819 MYOM1P52179 1685 aa19.66■□□□□ 0.74
CDKN2A-204ENST00000470819 RGPD2P0DJD1 1756 aa19.66■□□□□ 0.74
CDKN2A-204ENST00000470819 AKT1S1Q96B36 256 aa19.66■□□□□ 0.74
CDKN2A-204ENST00000470819 BTAF1O14981 1849 aa19.66■□□□□ 0.74
CDKN2A-204ENST00000470819 NSD2O96028 1365 aa19.66■□□□□ 0.74
CDKN2A-204ENST00000470819 SGIP1Q9BQI5 828 aa19.64■□□□□ 0.73
CDKN2A-204ENST00000470819 KIF20BQ96Q89 1820 aa19.63■□□□□ 0.73
CDKN2A-204ENST00000470819 WASHC2AQ641Q2 1341 aa19.63■□□□□ 0.73
CDKN2A-204ENST00000470819 TNNT2P45379 298 aaPredicted RBP19.63■□□□□ 0.73
CDKN2A-204ENST00000470819 POLKQ9UBT6 870 aa19.63■□□□□ 0.73
CDKN2A-204ENST00000470819 PAPPAQ13219 1627 aa19.62■□□□□ 0.73
CDKN2A-204ENST00000470819 PCDH11XQ9BZA7 1347 aa19.62■□□□□ 0.73
CDKN2A-204ENST00000470819 PCDH11YQ9BZA8 1340 aa19.62■□□□□ 0.73
CDKN2A-204ENST00000470819 DCAF8L1A6NGE4 600 aa19.62■□□□□ 0.73
CDKN2A-204ENST00000470819 CYP27B1O15528 508 aa19.62■□□□□ 0.73
CDKN2A-204ENST00000470819 FHDC1Q9C0D6 1143 aaPredicted RBP19.62■□□□□ 0.73
CDKN2A-204ENST00000470819 PANK3Q9H999 370 aa19.62■□□□□ 0.73
CDKN2A-204ENST00000470819 KAT6BQ8WYB5 2073 aa19.62■□□□□ 0.73
CDKN2A-204ENST00000470819 EYA1Q99502 592 aa19.61■□□□□ 0.73
CDKN2A-204ENST00000470819 TFCP2L1Q9NZI6 479 aa19.61■□□□□ 0.73
CDKN2A-204ENST00000470819 CCNL1Q9UK58 526 aaPredicted RBP19.61■□□□□ 0.73
CDKN2A-204ENST00000470819 SYT17Q9BSW7 474 aa19.6■□□□□ 0.73
CDKN2A-204ENST00000470819 SHANK3Q9BYB0 1731 aa19.59■□□□□ 0.73
CDKN2A-204ENST00000470819 PNPLA7Q6ZV29 1317 aa19.59■□□□□ 0.73
CDKN2A-204ENST00000470819 MPRIPQ6WCQ1 1025 aa19.58■□□□□ 0.72
CDKN2A-204ENST00000470819 ARXQ96QS3 562 aa19.58■□□□□ 0.72
CDKN2A-204ENST00000470819 DOT1LQ8TEK3 1739 aa19.57■□□□□ 0.72
CDKN2A-204ENST00000470819 YY1P25490 414 aa19.57■□□□□ 0.72
CDKN2A-204ENST00000470819 EIF4A2Q14240 407 aaKnown RBP19.56■□□□□ 0.72
CDKN2A-204ENST00000470819 SLC16A10Q8TF71 515 aa19.56■□□□□ 0.72
CDKN2A-204ENST00000470819 SPG7Q9UQ90 795 aa19.56■□□□□ 0.72
CDKN2A-204ENST00000470819 NCAPD2Q15021 1401 aa19.55■□□□□ 0.72
CDKN2A-204ENST00000470819 NKX1-1Q15270 411 aaPredicted RBP19.54■□□□□ 0.72
CDKN2A-204ENST00000470819 COL23A1Q86Y22 540 aaPredicted RBP19.52■□□□□ 0.72
CDKN2A-204ENST00000470819 PIGBQ92521 554 aa19.52■□□□□ 0.72
CDKN2A-204ENST00000470819 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.52■□□□□ 0.72
CDKN2A-204ENST00000470819 PALLDQ8WX93 1383 aa19.52■□□□□ 0.72
CDKN2A-204ENST00000470819 POLD1P28340 1107 aa19.51■□□□□ 0.71
CDKN2A-204ENST00000470819 MORC1Q86VD1 984 aa19.51■□□□□ 0.71
CDKN2A-204ENST00000470819 KLHL34Q8N239 644 aa19.5■□□□□ 0.71
CDKN2A-204ENST00000470819 SMARCC1Q92922 1105 aaPredicted RBP19.5■□□□□ 0.71
CDKN2A-204ENST00000470819 LY75O60449 1722 aa19.5■□□□□ 0.71
CDKN2A-204ENST00000470819 PHKG2P15735 406 aa19.49■□□□□ 0.71
CDKN2A-204ENST00000470819 IFNL2Q8IZJ0 200 aa19.49■□□□□ 0.71
CDKN2A-204ENST00000470819 KNSTRNQ9Y448 316 aa19.49■□□□□ 0.71
CDKN2A-204ENST00000470819 ANKRD26Q9UPS8 1709 aa19.48■□□□□ 0.71
CDKN2A-204ENST00000470819 MAP3K5Q99683 1374 aa19.47■□□□□ 0.71
CDKN2A-204ENST00000470819 MAP2P11137 1827 aaKnown RBP19.47■□□□□ 0.71
CDKN2A-204ENST00000470819 TMOD3Q9NYL9 352 aa19.47■□□□□ 0.71
CDKN2A-204ENST00000470819 IGSF1Q8N6C5 1336 aa19.47■□□□□ 0.71
CDKN2A-204ENST00000470819 PKD1L3Q7Z443 1732 aa19.45■□□□□ 0.7
CDKN2A-204ENST00000470819 HMGB2P26583 209 aaKnown RBP19.45■□□□□ 0.7
CDKN2A-204ENST00000470819 MSL1Q68DK7 614 aa19.45■□□□□ 0.7
CDKN2A-204ENST00000470819 ASAP1Q9ULH1 1129 aa19.45■□□□□ 0.7
CDKN2A-204ENST00000470819 KIF7Q2M1P5 1343 aa19.45■□□□□ 0.7
CDKN2A-204ENST00000470819 SMIM5Q71RC9 77 aa19.44■□□□□ 0.7
CDKN2A-204ENST00000470819 TOGARAM1Q9Y4F4 1720 aa19.44■□□□□ 0.7
CDKN2A-204ENST00000470819 LOC102724428A0A0B4J2F2 783 aa19.43■□□□□ 0.7
CDKN2A-204ENST00000470819 SIK1P57059 783 aa19.43■□□□□ 0.7
CDKN2A-204ENST00000470819 PLEKHO1Q53GL0 409 aaPredicted RBP19.43■□□□□ 0.7
CDKN2A-204ENST00000470819 AMIGO3Q86WK7 504 aa19.43■□□□□ 0.7
CDKN2A-204ENST00000470819 AEBP1Q8IUX7 1158 aa19.43■□□□□ 0.7
CDKN2A-204ENST00000470819 FLAD1Q8NFF5 587 aa19.43■□□□□ 0.7
CDKN2A-204ENST00000470819 AK7Q96M32 723 aa19.43■□□□□ 0.7
CDKN2A-204ENST00000470819 QSER1Q2KHR3 1735 aa19.42■□□□□ 0.7
CDKN2A-204ENST00000470819 GPR162Q16538 588 aa19.42■□□□□ 0.7
CDKN2A-204ENST00000470819 AMER1Q5JTC6 1135 aaPredicted RBP19.42■□□□□ 0.7
CDKN2A-204ENST00000470819 LINC00116Q8NCU8 138 aa19.42■□□□□ 0.7
CDKN2A-204ENST00000470819 NLGN2Q8NFZ4 835 aa19.42■□□□□ 0.7
CDKN2A-204ENST00000470819 ATG3Q9NT62 314 aa19.42■□□□□ 0.7
CDKN2A-204ENST00000470819 TUBGCP6Q96RT7 1819 aa19.41■□□□□ 0.7
CDKN2A-204ENST00000470819 PHF14O94880 888 aa19.4■□□□□ 0.7
CDKN2A-204ENST00000470819 ATP6V1AP38606 617 aa19.4■□□□□ 0.7
CDKN2A-204ENST00000470819 ITPK1Q13572 414 aa19.4■□□□□ 0.7
CDKN2A-204ENST00000470819 ZNF530Q6P9A1 599 aaPredicted RBP19.4■□□□□ 0.7
CDKN2A-204ENST00000470819 IL13P35225 146 aa19.39■□□□□ 0.69
CDKN2A-204ENST00000470819 AMOTQ4VCS5 1084 aa19.39■□□□□ 0.69
CDKN2A-204ENST00000470819 SULT6B1Q6IMI4 303 aa19.39■□□□□ 0.69
CDKN2A-204ENST00000470819 PELP1Q8IZL8 1130 aaKnown RBP19.39■□□□□ 0.69
CDKN2A-204ENST00000470819 DCAF5Q96JK2 942 aa19.39■□□□□ 0.69
CDKN2A-204ENST00000470819 PLEKHG2Q9H7P9 1386 aa19.39■□□□□ 0.69
CDKN2A-204ENST00000470819 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.38■□□□□ 0.69
CDKN2A-204ENST00000470819 ERVV-2B6SEH9 535 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms