RNA–Protein interactions for RNA: ENST00000470455.5

ATP6V1A-204, Transcript of ATPase H+ transporting V1 subunit A, humanhuman

TSL 2

Gene ATP6V1A, Length 2,266 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1A-204ENST00000470455 RTF1Q92541 710 aaKnown RBP10.88□□□□□ -0.67
ATP6V1A-204ENST00000470455 USP35Q9P2H5 1018 aa10.88□□□□□ -0.67
ATP6V1A-204ENST00000470455 LMO7Q8WWI1 1683 aa10.87□□□□□ -0.67
ATP6V1A-204ENST00000470455 TATP17735 454 aaPredicted RBP10.87□□□□□ -0.67
ATP6V1A-204ENST00000470455 TSR2Q969E8 191 aaKnown RBP10.87□□□□□ -0.67
ATP6V1A-204ENST00000470455 MYH16Q9H6N6 1097 aa10.87□□□□□ -0.67
ATP6V1A-204ENST00000470455 IL16Q14005 1332 aa10.87□□□□□ -0.67
ATP6V1A-204ENST00000470455 GNAT3A8MTJ3 354 aa10.87□□□□□ -0.67
ATP6V1A-204ENST00000470455 AMOTQ4VCS5 1084 aa10.87□□□□□ -0.67
ATP6V1A-204ENST00000470455 ZNF530Q6P9A1 599 aaPredicted RBP10.87□□□□□ -0.67
ATP6V1A-204ENST00000470455 CARD10Q9BWT7 1032 aa10.87□□□□□ -0.67
ATP6V1A-204ENST00000470455 RCAN3Q9UKA8 241 aa10.87□□□□□ -0.67
ATP6V1A-204ENST00000470455 GTF3C3Q9Y5Q9 886 aa10.87□□□□□ -0.67
ATP6V1A-204ENST00000470455 CALD1Q05682 793 aaKnown RBP10.86□□□□□ -0.67
ATP6V1A-204ENST00000470455 DLG5Q8TDM6 1919 aa10.85□□□□□ -0.67
ATP6V1A-204ENST00000470455 FANCIQ9NVI1 1328 aa10.85□□□□□ -0.67
ATP6V1A-204ENST00000470455 HTATSF1O43719 755 aaKnown RBP10.85□□□□□ -0.67
ATP6V1A-204ENST00000470455 IL17REQ8NFR9 667 aa10.85□□□□□ -0.67
ATP6V1A-204ENST00000470455 C8orf37Q96NL8 207 aa10.85□□□□□ -0.67
ATP6V1A-204ENST00000470455 MAP3K5Q99683 1374 aa10.85□□□□□ -0.67
ATP6V1A-204ENST00000470455 GNAI1P63096 354 aa10.84□□□□□ -0.67
ATP6V1A-204ENST00000470455 BCL11AQ9H165 835 aa10.84□□□□□ -0.67
ATP6V1A-204ENST00000470455 IFT57Q9NWB7 429 aa10.84□□□□□ -0.67
ATP6V1A-204ENST00000470455 COL14A1Q05707 1796 aaKnown RBP10.84□□□□□ -0.67
ATP6V1A-204ENST00000470455 ZNF853P0CG23 659 aa10.84□□□□□ -0.67
ATP6V1A-204ENST00000470455 EXOSC9Q06265 439 aaKnown RBP10.84□□□□□ -0.67
ATP6V1A-204ENST00000470455 AKAP4Q5JQC9 854 aa10.84□□□□□ -0.67
ATP6V1A-204ENST00000470455 C1orf141Q5JVX7 400 aa10.84□□□□□ -0.67
ATP6V1A-204ENST00000470455 LGR6Q9HBX8 967 aa10.84□□□□□ -0.67
ATP6V1A-204ENST00000470455 SPG7Q9UQ90 795 aa10.84□□□□□ -0.67
ATP6V1A-204ENST00000470455 MEGF6O75095 1541 aa10.84□□□□□ -0.67
ATP6V1A-204ENST00000470455 FAM208AQ9UK61 1670 aaKnown RBP10.84□□□□□ -0.67
ATP6V1A-204ENST00000470455 MPRIPQ6WCQ1 1025 aa10.83□□□□□ -0.68
ATP6V1A-204ENST00000470455 NGLY1Q96IV0 654 aa10.83□□□□□ -0.68
ATP6V1A-204ENST00000470455 CFAP44Q96MT7 982 aa10.83□□□□□ -0.68
ATP6V1A-204ENST00000470455 MBIPQ9NS73 344 aa10.83□□□□□ -0.68
ATP6V1A-204ENST00000470455 MIS18AQ9NYP9 233 aa10.83□□□□□ -0.68
ATP6V1A-204ENST00000470455 IL2RBP14784 551 aa10.83□□□□□ -0.68
ATP6V1A-204ENST00000470455 CRB1P82279 1406 aa10.83□□□□□ -0.68
ATP6V1A-204ENST00000470455 SPATA31A6Q5VVP1 1343 aa10.82□□□□□ -0.68
ATP6V1A-204ENST00000470455 IRX6P78412 446 aaPredicted RBP10.82□□□□□ -0.68
ATP6V1A-204ENST00000470455 MEX3CQ5U5Q3 659 aaKnown RBP10.82□□□□□ -0.68
ATP6V1A-204ENST00000470455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.82□□□□□ -0.687e-6■■□□□ 12.8
ATP6V1A-204ENST00000470455 CCDC9Q9Y3X0 531 aaKnown RBP10.82□□□□□ -0.68
ATP6V1A-204ENST00000470455 CHL1O00533 1208 aa10.82□□□□□ -0.68
ATP6V1A-204ENST00000470455 ZCRB1Q8TBF4 217 aaKnown RBP10.82□□□□□ -0.68
ATP6V1A-204ENST00000470455 RNMTO43148 476 aaKnown RBP10.81□□□□□ -0.68
ATP6V1A-204ENST00000470455 NEFLP07196 543 aa10.81□□□□□ -0.68
ATP6V1A-204ENST00000470455 PHKG2P15735 406 aa10.81□□□□□ -0.68
ATP6V1A-204ENST00000470455 FKBP8Q14318 412 aa10.81□□□□□ -0.68
ATP6V1A-204ENST00000470455 CYP27B1O15528 508 aa10.81□□□□□ -0.68
ATP6V1A-204ENST00000470455 IFNL2Q8IZJ0 200 aa10.81□□□□□ -0.68
ATP6V1A-204ENST00000470455 ELL2O00472 640 aaPredicted RBP10.8□□□□□ -0.68
ATP6V1A-204ENST00000470455 BCAR3O75815 825 aa10.8□□□□□ -0.68
ATP6V1A-204ENST00000470455 TAF7Q15545 349 aaPredicted RBP10.8□□□□□ -0.68
ATP6V1A-204ENST00000470455 RNF123Q5XPI4 1314 aa10.8□□□□□ -0.68
ATP6V1A-204ENST00000470455 OVOS2A0A0G2JMS6 1433 aa10.8□□□□□ -0.68
ATP6V1A-204ENST00000470455 LRP6O75581 1613 aa10.8□□□□□ -0.68
ATP6V1A-204ENST00000470455 PLIN1O60240 522 aa10.79□□□□□ -0.68
ATP6V1A-204ENST00000470455 UNC5CLQ8IV45 518 aa10.79□□□□□ -0.68
ATP6V1A-204ENST00000470455 DDX54Q8TDD1 881 aaKnown RBP10.79□□□□□ -0.68
ATP6V1A-204ENST00000470455 TSPYL4Q9UJ04 414 aa10.79□□□□□ -0.68
ATP6V1A-204ENST00000470455 SLIT2O94813 1529 aa10.79□□□□□ -0.68
ATP6V1A-204ENST00000470455 CEMIPQ8WUJ3 1361 aa10.79□□□□□ -0.68
ATP6V1A-204ENST00000470455 RRP1P56182 461 aaKnown RBP10.79□□□□□ -0.68
ATP6V1A-204ENST00000470455 TEFQ10587 303 aa10.79□□□□□ -0.68
ATP6V1A-204ENST00000470455 TSPYL6Q8N831 410 aa10.79□□□□□ -0.68
ATP6V1A-204ENST00000470455 C8orf58Q8NAV2 365 aa10.79□□□□□ -0.68
ATP6V1A-204ENST00000470455 SPATA31A1Q5TZJ5 1347 aa10.79□□□□□ -0.68
ATP6V1A-204ENST00000470455 PLCH1Q4KWH8 1693 aa10.78□□□□□ -0.68
ATP6V1A-204ENST00000470455 RARSP54136 660 aaKnown RBP10.78□□□□□ -0.68
ATP6V1A-204ENST00000470455 KRT24Q2M2I5 525 aa10.78□□□□□ -0.68
ATP6V1A-204ENST00000470455 FNBP4Q8N3X1 1017 aaPredicted RBP10.78□□□□□ -0.68
ATP6V1A-204ENST00000470455 BCL2L13Q9BXK5 485 aa10.78□□□□□ -0.68
ATP6V1A-204ENST00000470455 SPATA31A5Q5VU36 1347 aa10.78□□□□□ -0.68
ATP6V1A-204ENST00000470455 SPATA31A7Q8IWB4 1347 aa10.78□□□□□ -0.68
ATP6V1A-204ENST00000470455 VAMP4O75379 141 aa10.77□□□□□ -0.69
ATP6V1A-204ENST00000470455 USP21Q9UK80 565 aa10.77□□□□□ -0.69
ATP6V1A-204ENST00000470455 PCDH11XQ9BZA7 1347 aa10.77□□□□□ -0.69
ATP6V1A-204ENST00000470455 PCDH11YQ9BZA8 1340 aa10.77□□□□□ -0.69
ATP6V1A-204ENST00000470455 PLEKHG2Q9H7P9 1386 aa10.77□□□□□ -0.69
ATP6V1A-204ENST00000470455 CT47B1P0C2W7 299 aaPredicted RBP10.77□□□□□ -0.69
ATP6V1A-204ENST00000470455 TWISTNBQ3B726 338 aaPredicted RBP10.77□□□□□ -0.69
ATP6V1A-204ENST00000470455 BCL9LQ86UU0 1499 aa10.76□□□□□ -0.69
ATP6V1A-204ENST00000470455 BTBD11A6QL63 1104 aa10.76□□□□□ -0.69
ATP6V1A-204ENST00000470455 EXOC5O00471 708 aa10.76□□□□□ -0.69
ATP6V1A-204ENST00000470455 HSP90AB1P08238 724 aaKnown RBP10.76□□□□□ -0.69
ATP6V1A-204ENST00000470455 VPS72Q15906 364 aa10.76□□□□□ -0.69
ATP6V1A-204ENST00000470455 DCAF5Q96JK2 942 aa10.76□□□□□ -0.69
ATP6V1A-204ENST00000470455 THRAP3Q9Y2W1 955 aaKnown RBP10.76□□□□□ -0.69
ATP6V1A-204ENST00000470455 NRAPQ86VF7 1730 aa10.76□□□□□ -0.69
ATP6V1A-204ENST00000470455 KDM6AO15550 1401 aaPredicted RBP10.76□□□□□ -0.69
ATP6V1A-204ENST00000470455 KCNQ3O43525 872 aa10.75□□□□□ -0.69
ATP6V1A-204ENST00000470455 NFATC2IPQ8NCF5 419 aa10.75□□□□□ -0.69
ATP6V1A-204ENST00000470455 SSH1Q8WYL5 1049 aa10.75□□□□□ -0.69
ATP6V1A-204ENST00000470455 BABAM1Q9NWV8 329 aa10.75□□□□□ -0.69
ATP6V1A-204ENST00000470455 DISP2A7MBM2 1401 aa10.75□□□□□ -0.69
ATP6V1A-204ENST00000470455 TCERG1O14776 1098 aaKnown RBP10.75□□□□□ -0.69
ATP6V1A-204ENST00000470455 SLC52A2Q9HAB3 445 aa10.75□□□□□ -0.69
ATP6V1A-204ENST00000470455 AFF2P51816 1311 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms