RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 KIAA0232Q92628 1395 aa25.19■■□□□ 1.62
CDHR3-207ENST00000470188 ANKARQ7Z5J8 1434 aa25.19■■□□□ 1.62
CDHR3-207ENST00000470188 MFAP1P55081 439 aaKnown RBP25.18■■□□□ 1.62
CDHR3-207ENST00000470188 KRT24Q2M2I5 525 aa25.18■■□□□ 1.62
CDHR3-207ENST00000470188 KCNA6P17658 529 aa25.18■■□□□ 1.62
CDHR3-207ENST00000470188 AMPHP49418 695 aa25.18■■□□□ 1.62
CDHR3-207ENST00000470188 ANKRD45Q5TZF3 282 aa25.17■■□□□ 1.62
CDHR3-207ENST00000470188 C22orf23Q9BZE7 217 aa25.17■■□□□ 1.62
CDHR3-207ENST00000470188 PIK3C2AO00443 1686 aa25.17■■□□□ 1.62
CDHR3-207ENST00000470188 SIRT2Q8IXJ6 389 aa25.17■■□□□ 1.62
CDHR3-207ENST00000470188 CRB1P82279 1406 aa25.17■■□□□ 1.62
CDHR3-207ENST00000470188 KDRP35968 1356 aa25.15■■□□□ 1.62
CDHR3-207ENST00000470188 NLRP6P59044 892 aa25.14■■□□□ 1.62
CDHR3-207ENST00000470188 MTHFSDQ2M296 383 aaKnown RBP25.14■■□□□ 1.62
CDHR3-207ENST00000470188 INTS3Q68E01 1043 aaKnown RBP25.14■■□□□ 1.61
CDHR3-207ENST00000470188 RTF1Q92541 710 aaKnown RBP25.14■■□□□ 1.61
CDHR3-207ENST00000470188 TBC1D2Q9BYX2 928 aa25.14■■□□□ 1.61
CDHR3-207ENST00000470188 IGSF1Q8N6C5 1336 aa25.14■■□□□ 1.61
CDHR3-207ENST00000470188 FOXO3O43524 673 aa25.13■■□□□ 1.61
CDHR3-207ENST00000470188 EYA1Q99502 592 aa25.13■■□□□ 1.61
CDHR3-207ENST00000470188 ANTXR1Q9H6X2 564 aa25.13■■□□□ 1.61
CDHR3-207ENST00000470188 CEP170BQ9Y4F5 1589 aaPredicted RBP25.13■■□□□ 1.61
CDHR3-207ENST00000470188 EIF5BO60841 1220 aaKnown RBP25.12■■□□□ 1.61
CDHR3-207ENST00000470188 BMP2KLQ5H9B9 411 aa25.12■■□□□ 1.61
CDHR3-207ENST00000470188 RGS12O14924 1447 aa25.11■■□□□ 1.61
CDHR3-207ENST00000470188 PTPRCP08575 1304 aa25.1■■□□□ 1.61
CDHR3-207ENST00000470188 GAS2L2Q8NHY3 880 aa25.1■■□□□ 1.61
CDHR3-207ENST00000470188 SLKQ9H2G2 1235 aaPredicted RBP25.1■■□□□ 1.61
CDHR3-207ENST00000470188 MIS18AQ9NYP9 233 aa25.08■■□□□ 1.61
CDHR3-207ENST00000470188 TSPYL4Q9UJ04 414 aa25.08■■□□□ 1.61
CDHR3-207ENST00000470188 NUTM2GQ5VZR2 741 aa25.08■■□□□ 1.61
CDHR3-207ENST00000470188 HOXC9P31274 260 aa25.07■■□□□ 1.6
CDHR3-207ENST00000470188 ABTB2Q8N961 1025 aa25.05■■□□□ 1.6
CDHR3-207ENST00000470188 SLC4A2P04920 1241 aa25.05■■□□□ 1.6
CDHR3-207ENST00000470188 SETD1BQ9UPS6 1966 aaKnown RBP25.05■■□□□ 1.6
CDHR3-207ENST00000470188 MSH6P52701 1360 aa25.04■■□□□ 1.6
CDHR3-207ENST00000470188 DCTPP1Q9H773 170 aa25.04■■□□□ 1.6
CDHR3-207ENST00000470188 MARF1Q9Y4F3 1742 aaKnown RBP25.04■■□□□ 1.6
CDHR3-207ENST00000470188 HTATSF1O43719 755 aaKnown RBP25.03■■□□□ 1.6
CDHR3-207ENST00000470188 USP54Q70EL1 1684 aa25.03■■□□□ 1.6
CDHR3-207ENST00000470188 ANKRD44Q8N8A2 993 aa25.03■■□□□ 1.6
CDHR3-207ENST00000470188 ATP10DQ9P241 1426 aa25.02■■□□□ 1.6
CDHR3-207ENST00000470188 RBM25P49756 843 aaKnown RBP25.02■■□□□ 1.6
CDHR3-207ENST00000470188 ANKLE2Q86XL3 938 aa25.01■■□□□ 1.59
CDHR3-207ENST00000470188 RPAP2Q8IXW5 612 aaPredicted RBP25.01■■□□□ 1.59
CDHR3-207ENST00000470188 ZNF142P52746 1687 aaPredicted RBP25.01■■□□□ 1.59
CDHR3-207ENST00000470188 PHF8Q9UPP1 1060 aa25■■□□□ 1.59
CDHR3-207ENST00000470188 GNAT3A8MTJ3 354 aa25■■□□□ 1.59
CDHR3-207ENST00000470188 CEP85Q6P2H3 762 aa25■■□□□ 1.59
CDHR3-207ENST00000470188 C14orf37Q86TY3 774 aa25■■□□□ 1.59
CDHR3-207ENST00000470188 RTL1A6NKG5 1358 aa24.99■■□□□ 1.59
CDHR3-207ENST00000470188 NWD1Q149M9 1564 aa24.99■■□□□ 1.59
CDHR3-207ENST00000470188 LTV1Q96GA3 475 aaPredicted RBP24.98■■□□□ 1.59
CDHR3-207ENST00000470188 MEIS3Q99687 375 aa24.98■■□□□ 1.59
CDHR3-207ENST00000470188 LRRC37A3O60309 1634 aa24.98■■□□□ 1.59
CDHR3-207ENST00000470188 TBC1D9Q6ZT07 1266 aa24.97■■□□□ 1.59
CDHR3-207ENST00000470188 RRAGDQ9NQL2 400 aaPredicted RBP24.97■■□□□ 1.59
CDHR3-207ENST00000470188 G2E3Q7L622 706 aa24.97■■□□□ 1.59
CDHR3-207ENST00000470188 HSCBQ8IWL3 235 aa24.97■■□□□ 1.59
CDHR3-207ENST00000470188 CHD2O14647 1828 aaKnown RBP24.97■■□□□ 1.59
CDHR3-207ENST00000470188 FSD2A1L4K1 749 aa24.96■■□□□ 1.59
CDHR3-207ENST00000470188 GOLGA6L3A6NEY3 463 aa24.96■■□□□ 1.59
CDHR3-207ENST00000470188 SPRYD3Q8NCJ5 442 aa24.96■■□□□ 1.59
CDHR3-207ENST00000470188 PLEKHM2Q8IWE5 1019 aa24.95■■□□□ 1.59
CDHR3-207ENST00000470188 MAP3K5Q99683 1374 aa24.95■■□□□ 1.58
CDHR3-207ENST00000470188 STK31Q9BXU1 1019 aa24.95■■□□□ 1.58
CDHR3-207ENST00000470188 CCT4P50991 539 aaKnown RBP24.94■■□□□ 1.58
CDHR3-207ENST00000470188 CDC45O75419 566 aa24.94■■□□□ 1.58
CDHR3-207ENST00000470188 MCM4P33991 863 aa24.94■■□□□ 1.58
CDHR3-207ENST00000470188 SLC4A10Q6U841 1118 aa24.94■■□□□ 1.58
CDHR3-207ENST00000470188 GSPT1P15170 499 aaKnown RBP24.93■■□□□ 1.58
CDHR3-207ENST00000470188 RBM33Q96EV2 1170 aaKnown RBP24.93■■□□□ 1.58
CDHR3-207ENST00000470188 F6X3S4 739 aa24.93■■□□□ 1.58
CDHR3-207ENST00000470188 IL17REQ8NFR9 667 aa24.91■■□□□ 1.58
CDHR3-207ENST00000470188 CHMP5Q9NZZ3 219 aa24.91■■□□□ 1.58
CDHR3-207ENST00000470188 XRCC6P12956 609 aaKnown RBP eCLIP24.91■■□□□ 1.58
CDHR3-207ENST00000470188 CCDC30Q5VVM6 783 aa24.91■■□□□ 1.58
CDHR3-207ENST00000470188 SNX21Q969T3 373 aa24.91■■□□□ 1.58
CDHR3-207ENST00000470188 TTC22Q5TAA0 569 aa24.9■■□□□ 1.58
CDHR3-207ENST00000470188 C16orf71Q8IYS4 520 aaPredicted RBP24.9■■□□□ 1.58
CDHR3-207ENST00000470188 ADGRL3Q9HAR2 1447 aa24.9■■□□□ 1.58
CDHR3-207ENST00000470188 USHBP1Q8N6Y0 703 aa24.9■■□□□ 1.58
CDHR3-207ENST00000470188 KDM4FA0A1W2PPD8 638 aa24.89■■□□□ 1.58
CDHR3-207ENST00000470188 HMMRO75330 724 aa24.89■■□□□ 1.58
CDHR3-207ENST00000470188 IP6K1Q92551 441 aa24.89■■□□□ 1.58
CDHR3-207ENST00000470188 BABAM1Q9NWV8 329 aa24.89■■□□□ 1.58
CDHR3-207ENST00000470188 TAF7Q15545 349 aaPredicted RBP24.88■■□□□ 1.57
CDHR3-207ENST00000470188 ESCO1Q5FWF5 840 aa24.88■■□□□ 1.57
CDHR3-207ENST00000470188 SOS1Q07889 1333 aaPredicted RBP24.88■■□□□ 1.57
CDHR3-207ENST00000470188 LTN1O94822 1766 aa24.88■■□□□ 1.57
CDHR3-207ENST00000470188 PSME1Q06323 249 aa24.88■■□□□ 1.57
CDHR3-207ENST00000470188 FLIIQ13045 1269 aa24.88■■□□□ 1.57
CDHR3-207ENST00000470188 NFAT5O94916 1531 aa24.87■■□□□ 1.57
CDHR3-207ENST00000470188 KIF2CQ99661 725 aa24.87■■□□□ 1.57
CDHR3-207ENST00000470188 FAM208AQ9UK61 1670 aaKnown RBP24.86■■□□□ 1.57
CDHR3-207ENST00000470188 APBB1O00213 710 aa24.86■■□□□ 1.57
CDHR3-207ENST00000470188 FKBP5Q13451 457 aaPredicted RBP24.86■■□□□ 1.57
CDHR3-207ENST00000470188 SMARCA5O60264 1052 aaPredicted RBP24.86■■□□□ 1.57
CDHR3-207ENST00000470188 OTUD7AQ8TE49 926 aaPredicted RBP24.86■■□□□ 1.57
CDHR3-207ENST00000470188 CLCN1P35523 988 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms