RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 TMEM88BA6NKF7 163 aa7.62□□□□□ -1.19
VPS8-220ENST00000469713 USP4Q13107 963 aa7.62□□□□□ -1.19
VPS8-220ENST00000469713 TMEM164Q5U3C3 297 aa7.62□□□□□ -1.19
VPS8-220ENST00000469713 KIAA1024Q9UPX6 916 aa7.62□□□□□ -1.19
VPS8-220ENST00000469713 ZBTB7BO15156 539 aaPredicted RBP7.61□□□□□ -1.19
VPS8-220ENST00000469713 ALDH1A1P00352 501 aa7.61□□□□□ -1.19
VPS8-220ENST00000469713 NR3C2P08235 984 aa7.61□□□□□ -1.19
VPS8-220ENST00000469713 ATP1A2P50993 1020 aa7.61□□□□□ -1.19
VPS8-220ENST00000469713 NR5A1Q13285 461 aa7.61□□□□□ -1.19
VPS8-220ENST00000469713 ANKMY2Q8IV38 441 aa7.61□□□□□ -1.19
VPS8-220ENST00000469713 CCDC116Q8IYX3 515 aa7.61□□□□□ -1.19
VPS8-220ENST00000469713 SIRT1Q96EB6 747 aa7.61□□□□□ -1.19
VPS8-220ENST00000469713 CYLDQ9NQC7 956 aa7.61□□□□□ -1.19
VPS8-220ENST00000469713 PCDHGA11Q9Y5H2 935 aa7.61□□□□□ -1.19
VPS8-220ENST00000469713 MYCP01106 439 aaPredicted RBP7.6□□□□□ -1.19
VPS8-220ENST00000469713 ERVK-9P63128 1117 aa7.6□□□□□ -1.19
VPS8-220ENST00000469713 DHX9Q08211 1270 aaKnown RBP7.6□□□□□ -1.19
VPS8-220ENST00000469713 PDE4CQ08493 712 aa7.6□□□□□ -1.19
VPS8-220ENST00000469713 DPYDQ12882 1025 aa7.6□□□□□ -1.19
VPS8-220ENST00000469713 TRIM26Q12899 539 aaPredicted RBP7.6□□□□□ -1.19
VPS8-220ENST00000469713 PPP1R26Q5T8A7 1209 aaPredicted RBP7.6□□□□□ -1.19
VPS8-220ENST00000469713 ZNF784Q8NCA9 323 aaPredicted RBP7.6□□□□□ -1.19
VPS8-220ENST00000469713 TNFRSF10AO00220 468 aa7.59□□□□□ -1.19
VPS8-220ENST00000469713 DKK1O94907 266 aa7.59□□□□□ -1.19
VPS8-220ENST00000469713 PSME1Q06323 249 aa7.59□□□□□ -1.19
VPS8-220ENST00000469713 CC2D2BQ6DHV5 1058 aa7.59□□□□□ -1.19
VPS8-220ENST00000469713 TRIM67Q6ZTA4 783 aa7.59□□□□□ -1.19
VPS8-220ENST00000469713 LARGE2Q8N3Y3 721 aa7.59□□□□□ -1.19
VPS8-220ENST00000469713 FAM200AQ8TCP9 573 aa7.59□□□□□ -1.19
VPS8-220ENST00000469713 GDF9O60383 454 aa7.58□□□□□ -1.2
VPS8-220ENST00000469713 NNTQ13423 1086 aa7.58□□□□□ -1.2
VPS8-220ENST00000469713 CCDC102BQ68D86 513 aa7.58□□□□□ -1.2
VPS8-220ENST00000469713 SIX5Q8N196 739 aa7.58□□□□□ -1.2
VPS8-220ENST00000469713 TPCN2Q8NHX9 752 aa7.58□□□□□ -1.2
VPS8-220ENST00000469713 SNIP1Q8TAD8 396 aaKnown RBP7.58□□□□□ -1.2
VPS8-220ENST00000469713 OSBPL3Q9H4L5 887 aa7.58□□□□□ -1.2
VPS8-220ENST00000469713 WASF2Q9Y6W5 498 aa7.58□□□□□ -1.2
VPS8-220ENST00000469713 J3QL48 77 aa7.57□□□□□ -1.2
VPS8-220ENST00000469713 LILRA1O75019 489 aa7.57□□□□□ -1.2
VPS8-220ENST00000469713 AEBP1Q8IUX7 1158 aa7.57□□□□□ -1.2
VPS8-220ENST00000469713 ESF1Q9H501 851 aaKnown RBP7.57□□□□□ -1.2
VPS8-220ENST00000469713 PDZRN3Q9UPQ7 1066 aa7.57□□□□□ -1.2
VPS8-220ENST00000469713 TTC24A2A3L6 582 aaPredicted RBP7.56□□□□□ -1.2
VPS8-220ENST00000469713 SFI1A8K8P3 1242 aa7.56□□□□□ -1.2
VPS8-220ENST00000469713 MYT1Q01538 1121 aa7.56□□□□□ -1.2
VPS8-220ENST00000469713 FAM69CQ0P6D2 419 aa7.56□□□□□ -1.2
VPS8-220ENST00000469713 CYP4X1Q8N118 509 aa7.56□□□□□ -1.2
VPS8-220ENST00000469713 PGPEP1Q9NXJ5 209 aa7.56□□□□□ -1.2
VPS8-220ENST00000469713 SLAIN2Q9P270 581 aa7.56□□□□□ -1.2
VPS8-220ENST00000469713 STAU1O95793 577 aaKnown RBP7.55□□□□□ -1.2
VPS8-220ENST00000469713 ADD1P35611 737 aaKnown RBP7.55□□□□□ -1.2
VPS8-220ENST00000469713 SEC13P55735 322 aa7.55□□□□□ -1.2
VPS8-220ENST00000469713 TOR4AQ9NXH8 423 aa7.55□□□□□ -1.2
VPS8-220ENST00000469713 RBM19Q9Y4C8 960 aaKnown RBP7.55□□□□□ -1.2
VPS8-220ENST00000469713 EMILIN1Q9Y6C2 1016 aa7.55□□□□□ -1.2
VPS8-220ENST00000469713 ZNF787Q6DD87 383 aa7.54□□□□□ -1.2
VPS8-220ENST00000469713 KCTD17Q8N5Z5 321 aa7.54□□□□□ -1.2
VPS8-220ENST00000469713 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.54□□□□□ -1.2
VPS8-220ENST00000469713 TMEM229AB2RXF0 380 aa7.53□□□□□ -1.2
VPS8-220ENST00000469713 BRD1O95696 1058 aa7.53□□□□□ -1.2
VPS8-220ENST00000469713 SMPD1P17405 629 aa7.53□□□□□ -1.2
VPS8-220ENST00000469713 CYP2U1Q7Z449 544 aa7.53□□□□□ -1.2
VPS8-220ENST00000469713 TRIM52Q96A61 297 aa7.53□□□□□ -1.2
VPS8-220ENST00000469713 ITPKCQ96DU7 683 aa7.53□□□□□ -1.2
VPS8-220ENST00000469713 ZNF358Q9NW07 568 aa7.53□□□□□ -1.2
VPS8-220ENST00000469713 ZBTB7CA1YPR0 619 aa7.52□□□□□ -1.21
VPS8-220ENST00000469713 LGR5O75473 907 aa7.52□□□□□ -1.21
VPS8-220ENST00000469713 ZIC2O95409 532 aaPredicted RBP7.52□□□□□ -1.21
VPS8-220ENST00000469713 SCNN1DP51172 638 aa7.52□□□□□ -1.21
VPS8-220ENST00000469713 GDF10P55107 478 aa7.52□□□□□ -1.21
VPS8-220ENST00000469713 PRR20EP86478 221 aa7.52□□□□□ -1.21
VPS8-220ENST00000469713 PRR20CP86479 221 aa7.52□□□□□ -1.21
VPS8-220ENST00000469713 PRR20DP86480 221 aa7.52□□□□□ -1.21
VPS8-220ENST00000469713 PRR20BP86481 221 aa7.52□□□□□ -1.21
VPS8-220ENST00000469713 PRR20AP86496 221 aa7.52□□□□□ -1.21
VPS8-220ENST00000469713 CBLBQ13191 982 aa7.52□□□□□ -1.21
VPS8-220ENST00000469713 CLP1Q92989 425 aaKnown RBP7.52□□□□□ -1.21
VPS8-220ENST00000469713 KLF16Q9BXK1 252 aaPredicted RBP7.52□□□□□ -1.21
VPS8-220ENST00000469713 ZFAND3Q9H8U3 227 aa7.52□□□□□ -1.21
VPS8-220ENST00000469713 WDR4P57081 412 aaKnown RBP7.51□□□□□ -1.21
VPS8-220ENST00000469713 SWI5Q1ZZU3 235 aa7.51□□□□□ -1.21
VPS8-220ENST00000469713 TSEN2Q8NCE0 465 aaKnown RBP7.51□□□□□ -1.21
VPS8-220ENST00000469713 ETNK1Q9HBU6 452 aa7.51□□□□□ -1.21
VPS8-220ENST00000469713 RAB6BQ9NRW1 208 aa7.51□□□□□ -1.21
VPS8-220ENST00000469713 ADH1AP07327 375 aa7.5□□□□□ -1.21
VPS8-220ENST00000469713 TIMP2P16035 220 aa7.5□□□□□ -1.21
VPS8-220ENST00000469713 PHLDB3Q6NSJ2 640 aa7.5□□□□□ -1.21
VPS8-220ENST00000469713 HPS1Q92902 700 aa7.5□□□□□ -1.21
VPS8-220ENST00000469713 ZNF775Q96BV0 537 aaPredicted RBP7.5□□□□□ -1.21
VPS8-220ENST00000469713 ARHGEF10LQ9HCE6 1279 aa7.5□□□□□ -1.21
VPS8-220ENST00000469713 SERTAD1Q9UHV2 236 aa7.5□□□□□ -1.21
VPS8-220ENST00000469713 M0R2N6 131 aa7.49□□□□□ -1.21
VPS8-220ENST00000469713 PRMT3O60678 531 aa7.49□□□□□ -1.21
VPS8-220ENST00000469713 GNRH1P01148 92 aa7.49□□□□□ -1.21
VPS8-220ENST00000469713 INHAP05111 366 aa7.49□□□□□ -1.21
VPS8-220ENST00000469713 ATP2B4P23634 1241 aa7.49□□□□□ -1.21
VPS8-220ENST00000469713 SSFA2P28290 1259 aa7.49□□□□□ -1.21
VPS8-220ENST00000469713 KCNA1Q09470 495 aa7.49□□□□□ -1.21
VPS8-220ENST00000469713 KDF1Q8NAX2 398 aaPredicted RBP7.49□□□□□ -1.21
VPS8-220ENST00000469713 PRIMPOLQ96LW4 560 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms