RNA–Protein interactions for RNA: ENST00000469558.1

MCF2L-222, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-222ENST00000469558 IGSF1Q8N6C5 1336 aa15.94■□□□□ 0.14
MCF2L-222ENST00000469558 EN1Q05925 392 aaPredicted RBP15.93■□□□□ 0.14
MCF2L-222ENST00000469558 TOGARAM1Q9Y4F4 1720 aa15.92■□□□□ 0.14
MCF2L-222ENST00000469558 KCNQ2O43526 872 aa15.91■□□□□ 0.14
MCF2L-222ENST00000469558 BAG6P46379 1132 aa15.91■□□□□ 0.14
MCF2L-222ENST00000469558 SF3B2Q13435 895 aaKnown RBP15.91■□□□□ 0.14
MCF2L-222ENST00000469558 EZH2Q15910 746 aaKnown RBP15.91■□□□□ 0.14
MCF2L-222ENST00000469558 BTAF1O14981 1849 aa15.91■□□□□ 0.14
MCF2L-222ENST00000469558 APBA3O96018 575 aa15.9■□□□□ 0.14
MCF2L-222ENST00000469558 IL13P35225 146 aa15.9■□□□□ 0.14
MCF2L-222ENST00000469558 MTHFSP49914 203 aa15.9■□□□□ 0.14
MCF2L-222ENST00000469558 BCL11BQ9C0K0 894 aaPredicted RBP15.9■□□□□ 0.14
MCF2L-222ENST00000469558 ZCRB1Q8TBF4 217 aaKnown RBP15.89■□□□□ 0.13
MCF2L-222ENST00000469558 KDRP35968 1356 aa15.88■□□□□ 0.13
MCF2L-222ENST00000469558 PARD3Q8TEW0 1356 aa15.88■□□□□ 0.13
MCF2L-222ENST00000469558 CYP27B1O15528 508 aa15.88■□□□□ 0.13
MCF2L-222ENST00000469558 TATP17735 454 aaPredicted RBP15.88■□□□□ 0.13
MCF2L-222ENST00000469558 AEBP1Q8IUX7 1158 aa15.88■□□□□ 0.13
MCF2L-222ENST00000469558 DDX54Q8TDD1 881 aaKnown RBP15.88■□□□□ 0.13
MCF2L-222ENST00000469558 RAPGEF4Q8WZA2 1011 aa15.88■□□□□ 0.13
MCF2L-222ENST00000469558 PLEKHG2Q9H7P9 1386 aa15.87■□□□□ 0.13
MCF2L-222ENST00000469558 ACSBG1Q96GR2 724 aa15.87■□□□□ 0.13
MCF2L-222ENST00000469558 PLSCR1O15162 318 aa15.86■□□□□ 0.13
MCF2L-222ENST00000469558 CNGB1Q14028 1251 aaPredicted RBP15.86■□□□□ 0.13
MCF2L-222ENST00000469558 PROM2Q8N271 834 aa15.86■□□□□ 0.13
MCF2L-222ENST00000469558 ZEB1P37275 1124 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-222ENST00000469558 PAPPAQ13219 1627 aa15.85■□□□□ 0.13
MCF2L-222ENST00000469558 PCDH11XQ9BZA7 1347 aa15.85■□□□□ 0.13
MCF2L-222ENST00000469558 PCDH11YQ9BZA8 1340 aa15.85■□□□□ 0.13
MCF2L-222ENST00000469558 ITGB4P16144 1822 aa15.83■□□□□ 0.12
MCF2L-222ENST00000469558 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.83■□□□□ 0.12
MCF2L-222ENST00000469558 LY75O60449 1722 aa15.82■□□□□ 0.12
MCF2L-222ENST00000469558 PPP2R1AP30153 589 aa15.82■□□□□ 0.12
MCF2L-222ENST00000469558 NKX1-1Q15270 411 aaPredicted RBP15.82■□□□□ 0.12
MCF2L-222ENST00000469558 SRCAPQ6ZRS2 3230 aa15.82■□□□□ 0.12
MCF2L-222ENST00000469558 PRIM1P49642 420 aaKnown RBP15.81■□□□□ 0.12
MCF2L-222ENST00000469558 SULT6B1Q6IMI4 303 aa15.81■□□□□ 0.12
MCF2L-222ENST00000469558 PHKG2P15735 406 aa15.8■□□□□ 0.12
MCF2L-222ENST00000469558 ANO8Q9HCE9 1232 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-222ENST00000469558 KDM6AO15550 1401 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-222ENST00000469558 DIAPH1O60610 1272 aaKnown RBP15.79■□□□□ 0.12
MCF2L-222ENST00000469558 DDX10Q13206 875 aaKnown RBP15.79■□□□□ 0.12
MCF2L-222ENST00000469558 SPG7Q9UQ90 795 aa15.79■□□□□ 0.12
MCF2L-222ENST00000469558 PSDA5PKW4 1024 aaPredicted RBP15.78■□□□□ 0.12
MCF2L-222ENST00000469558 TXNRD1Q16881 649 aa15.78■□□□□ 0.12
MCF2L-222ENST00000469558 ADAMTS7Q9UKP4 1686 aa15.78■□□□□ 0.12
MCF2L-222ENST00000469558 KAT6BQ8WYB5 2073 aa15.77■□□□□ 0.12
MCF2L-222ENST00000469558 LRRC4BQ9NT99 713 aa15.77■□□□□ 0.12
MCF2L-222ENST00000469558 CASZ1Q86V15 1759 aa15.77■□□□□ 0.11
MCF2L-222ENST00000469558 HMOX1P09601 288 aa15.76■□□□□ 0.11
MCF2L-222ENST00000469558 R3HDM1Q15032 1099 aaKnown RBP15.76■□□□□ 0.11
MCF2L-222ENST00000469558 IFNL2Q8IZJ0 200 aa15.75■□□□□ 0.11
MCF2L-222ENST00000469558 SYTL4Q96C24 671 aaPredicted RBP15.75■□□□□ 0.11
MCF2L-222ENST00000469558 LRP5O75197 1615 aa15.75■□□□□ 0.11
MCF2L-222ENST00000469558 SCN11AQ9UI33 1791 aa15.75■□□□□ 0.11
MCF2L-222ENST00000469558 PIGBQ92521 554 aa15.74■□□□□ 0.11
MCF2L-222ENST00000469558 TUBGCP6Q96RT7 1819 aa15.73■□□□□ 0.11
MCF2L-222ENST00000469558 AMOTQ4VCS5 1084 aa15.73■□□□□ 0.11
MCF2L-222ENST00000469558 PLEKHO1Q53GL0 409 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-222ENST00000469558 ZNF530Q6P9A1 599 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-222ENST00000469558 VIRMAQ69YN4 1812 aaKnown RBP15.73■□□□□ 0.11
MCF2L-222ENST00000469558 MRC1P22897 1456 aa15.72■□□□□ 0.11
MCF2L-222ENST00000469558 KCNQ4P56696 695 aa15.72■□□□□ 0.11
MCF2L-222ENST00000469558 TAF1LQ8IZX4 1826 aa15.72■□□□□ 0.11
MCF2L-222ENST00000469558 C5P01031 1676 aa15.71■□□□□ 0.11
MCF2L-222ENST00000469558 MPRIPQ6WCQ1 1025 aa15.71■□□□□ 0.11
MCF2L-222ENST00000469558 PDGFDQ9GZP0 370 aaPredicted RBP15.71■□□□□ 0.11
MCF2L-222ENST00000469558 RSPH6AQ9H0K4 717 aa15.71■□□□□ 0.11
MCF2L-222ENST00000469558 PALLDQ8WX93 1383 aa15.71■□□□□ 0.11
MCF2L-222ENST00000469558 QSER1Q2KHR3 1735 aa15.71■□□□□ 0.1
MCF2L-222ENST00000469558 U2SURPO15042 1029 aaKnown RBP15.7■□□□□ 0.1
MCF2L-222ENST00000469558 ZNF827Q17R98 1081 aa15.7■□□□□ 0.1
MCF2L-222ENST00000469558 MTHFSDQ2M296 383 aaKnown RBP15.7■□□□□ 0.1
MCF2L-222ENST00000469558 DCAF5Q96JK2 942 aa15.7■□□□□ 0.1
MCF2L-222ENST00000469558 SLC27A3Q5K4L6 730 aa15.69■□□□□ 0.1
MCF2L-222ENST00000469558 AKT1S1Q96B36 256 aa15.69■□□□□ 0.1
MCF2L-222ENST00000469558 PHACTR3Q96KR7 559 aa15.69■□□□□ 0.1
MCF2L-222ENST00000469558 CFAP53Q96M91 514 aa15.69■□□□□ 0.1
MCF2L-222ENST00000469558 ZNF831Q5JPB2 1677 aa15.68■□□□□ 0.1
MCF2L-222ENST00000469558 RALBP1Q15311 655 aa15.68■□□□□ 0.1
MCF2L-222ENST00000469558 SLC15A2Q16348 729 aa15.68■□□□□ 0.1
MCF2L-222ENST00000469558 NBPF14Q5TI25 921 aa15.68■□□□□ 0.1
MCF2L-222ENST00000469558 ASAP1Q9ULH1 1129 aa15.68■□□□□ 0.1
MCF2L-222ENST00000469558 ERVV-2B6SEH9 535 aa15.67■□□□□ 0.1
MCF2L-222ENST00000469558 AKAP4Q5JQC9 854 aa15.67■□□□□ 0.1
MCF2L-222ENST00000469558 ATG3Q9NT62 314 aa15.67■□□□□ 0.1
MCF2L-222ENST00000469558 SIPA1L3O60292 1781 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-222ENST00000469558 CICQ96RK0 1608 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-222ENST00000469558 ZNF316A6NFI3 1004 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-222ENST00000469558 HSP90AB1P08238 724 aaKnown RBP15.66■□□□□ 0.1
MCF2L-222ENST00000469558 PRKAR2BP31323 418 aa15.66■□□□□ 0.1
MCF2L-222ENST00000469558 LGR6Q9HBX8 967 aa15.66■□□□□ 0.1
MCF2L-222ENST00000469558 TMOD3Q9NYL9 352 aa15.66■□□□□ 0.1
MCF2L-222ENST00000469558 MYBBP1AQ9BQG0 1328 aaKnown RBP15.66■□□□□ 0.1
MCF2L-222ENST00000469558 C4BP0C0L5 1744 aa15.65■□□□□ 0.1
MCF2L-222ENST00000469558 C1orf141Q5JVX7 400 aa15.65■□□□□ 0.1
MCF2L-222ENST00000469558 SLC4A9Q96Q91 983 aa15.65■□□□□ 0.1
MCF2L-222ENST00000469558 PRKRIP1Q9H875 184 aaPredicted RBP15.65■□□□□ 0.1
MCF2L-222ENST00000469558 CCNL1Q9UK58 526 aaPredicted RBP15.65■□□□□ 0.1
MCF2L-222ENST00000469558 COL5A3P25940 1745 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms