RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 KIF1BPQ96EK5 621 aa10.85□□□□□ -0.67
SMARCE1-207ENST00000469334 SAMD9LQ8IVG5 1584 aa10.85□□□□□ -0.67
SMARCE1-207ENST00000469334 TRPM2O94759 1503 aa10.85□□□□□ -0.67
SMARCE1-207ENST00000469334 TTC22Q5TAA0 569 aa10.84□□□□□ -0.67
SMARCE1-207ENST00000469334 PTCH1Q13635 1447 aa10.84□□□□□ -0.67
SMARCE1-207ENST00000469334 ZC3H13Q5T200 1668 aaKnown RBP10.84□□□□□ -0.67
SMARCE1-207ENST00000469334 ABCA8O94911 1581 aa10.84□□□□□ -0.67
SMARCE1-207ENST00000469334 HCLS1P14317 486 aaPredicted RBP10.84□□□□□ -0.67
SMARCE1-207ENST00000469334 GSPT1P15170 499 aaKnown RBP10.84□□□□□ -0.67
SMARCE1-207ENST00000469334 AXDND1Q5T1B0 1012 aaPredicted RBP10.84□□□□□ -0.67
SMARCE1-207ENST00000469334 SECISBP2LQ93073 1101 aaKnown RBP10.84□□□□□ -0.67
SMARCE1-207ENST00000469334 CARD14Q9BXL6 1004 aa10.84□□□□□ -0.67
SMARCE1-207ENST00000469334 CHMP4AQ9BY43 222 aa10.84□□□□□ -0.67
SMARCE1-207ENST00000469334 MAGI1Q96QZ7 1491 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-207ENST00000469334 WDR33Q9C0J8 1336 aaKnown RBP10.83□□□□□ -0.68
SMARCE1-207ENST00000469334 MORC1Q86VD1 984 aa10.83□□□□□ -0.68
SMARCE1-207ENST00000469334 NOL10Q9BSC4 688 aaKnown RBP10.83□□□□□ -0.68
SMARCE1-207ENST00000469334 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-207ENST00000469334 ERICH4A6NGS2 130 aa10.82□□□□□ -0.68
SMARCE1-207ENST00000469334 TNNT1P13805 278 aa10.82□□□□□ -0.68
SMARCE1-207ENST00000469334 RAD51AP2Q09MP3 1159 aa10.82□□□□□ -0.68
SMARCE1-207ENST00000469334 FUCA2Q9BTY2 467 aa10.82□□□□□ -0.68
SMARCE1-207ENST00000469334 RASSF4Q9H2L5 321 aa10.82□□□□□ -0.68
SMARCE1-207ENST00000469334 RAD50Q92878 1312 aa10.82□□□□□ -0.68
SMARCE1-207ENST00000469334 TNNT3P45378 269 aaPredicted RBP10.82□□□□□ -0.68
SMARCE1-207ENST00000469334 BMS1Q14692 1282 aaKnown RBP10.82□□□□□ -0.68
SMARCE1-207ENST00000469334 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.82□□□□□ -0.68
SMARCE1-207ENST00000469334 PLEKHM2Q8IWE5 1019 aa10.82□□□□□ -0.68
SMARCE1-207ENST00000469334 TXLNBQ8N3L3 684 aa10.82□□□□□ -0.68
SMARCE1-207ENST00000469334 MPNDQ8N594 471 aa10.82□□□□□ -0.68
SMARCE1-207ENST00000469334 ARHGAP45Q92619 1136 aa10.82□□□□□ -0.68
SMARCE1-207ENST00000469334 ERO1AQ96HE7 468 aa10.82□□□□□ -0.68
SMARCE1-207ENST00000469334 TMX3Q96JJ7 454 aa10.82□□□□□ -0.68
SMARCE1-207ENST00000469334 NSD2O96028 1365 aa10.82□□□□□ -0.68
SMARCE1-207ENST00000469334 KIF24Q5T7B8 1368 aa10.82□□□□□ -0.68
SMARCE1-207ENST00000469334 CCDC171Q6TFL3 1326 aa10.81□□□□□ -0.68
SMARCE1-207ENST00000469334 CLGNO14967 610 aa10.81□□□□□ -0.68
SMARCE1-207ENST00000469334 HNRNPH2P55795 449 aaKnown RBP10.81□□□□□ -0.68
SMARCE1-207ENST00000469334 UBE2HP62256 183 aa10.81□□□□□ -0.68
SMARCE1-207ENST00000469334 KMT5BQ4FZB7 885 aa10.81□□□□□ -0.68
SMARCE1-207ENST00000469334 TEX35Q5T0J7 233 aa10.81□□□□□ -0.68
SMARCE1-207ENST00000469334 USP48Q86UV5 1035 aa10.81□□□□□ -0.68
SMARCE1-207ENST00000469334 NSD3Q9BZ95 1437 aa10.81□□□□□ -0.68
SMARCE1-207ENST00000469334 RNF216Q9NWF9 866 aaPredicted RBP10.81□□□□□ -0.68
SMARCE1-207ENST00000469334 RPAP1Q9BWH6 1393 aaPredicted RBP10.81□□□□□ -0.68
SMARCE1-207ENST00000469334 ZBTB7BO15156 539 aaPredicted RBP10.81□□□□□ -0.68
SMARCE1-207ENST00000469334 HTATSF1O43719 755 aaKnown RBP10.81□□□□□ -0.68
SMARCE1-207ENST00000469334 BRMS1Q9HCU9 246 aa10.81□□□□□ -0.68
SMARCE1-207ENST00000469334 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.81□□□□□ -0.68
SMARCE1-207ENST00000469334 TSR2Q969E8 191 aaKnown RBP10.8□□□□□ -0.68
SMARCE1-207ENST00000469334 RTL1A6NKG5 1358 aa10.8□□□□□ -0.68
SMARCE1-207ENST00000469334 PTPRTO14522 1441 aa10.8□□□□□ -0.68
SMARCE1-207ENST00000469334 RGS12O14924 1447 aa10.8□□□□□ -0.68
SMARCE1-207ENST00000469334 MAP3K4Q9Y6R4 1608 aa10.79□□□□□ -0.68
SMARCE1-207ENST00000469334 GADD45BO75293 160 aaPredicted RBP10.79□□□□□ -0.68
SMARCE1-207ENST00000469334 KNDC1Q76NI1 1749 aa10.79□□□□□ -0.68
SMARCE1-207ENST00000469334 ERC2O15083 957 aa10.79□□□□□ -0.68
SMARCE1-207ENST00000469334 NOP2P46087 812 aaKnown RBP10.79□□□□□ -0.68
SMARCE1-207ENST00000469334 ANAPC15P60006 121 aa10.79□□□□□ -0.68
SMARCE1-207ENST00000469334 CHAMP1Q96JM3 812 aa10.79□□□□□ -0.68
SMARCE1-207ENST00000469334 C16orf45Q96MC5 204 aaPredicted RBP10.79□□□□□ -0.68
SMARCE1-207ENST00000469334 IFT57Q9NWB7 429 aa10.79□□□□□ -0.68
SMARCE1-207ENST00000469334 TUBGCP6Q96RT7 1819 aa10.79□□□□□ -0.68
SMARCE1-207ENST00000469334 CD109Q6YHK3 1445 aa10.79□□□□□ -0.68
SMARCE1-207ENST00000469334 CCDC192P0DO97 292 aa10.78□□□□□ -0.68
SMARCE1-207ENST00000469334 PTGS1P23219 599 aa10.78□□□□□ -0.68
SMARCE1-207ENST00000469334 TPM4P67936 248 aa10.78□□□□□ -0.68
SMARCE1-207ENST00000469334 RBM6P78332 1123 aaKnown RBP10.78□□□□□ -0.68
SMARCE1-207ENST00000469334 MAPK8IP2Q13387 824 aaPredicted RBP10.78□□□□□ -0.68
SMARCE1-207ENST00000469334 CEP135Q66GS9 1140 aa10.78□□□□□ -0.68
SMARCE1-207ENST00000469334 AEBP1Q8IUX7 1158 aa10.78□□□□□ -0.68
SMARCE1-207ENST00000469334 IL17RAQ96F46 866 aa10.78□□□□□ -0.68
SMARCE1-207ENST00000469334 CWC15Q9P013 229 aaKnown RBP10.78□□□□□ -0.68
SMARCE1-207ENST00000469334 IFT172Q9UG01 1749 aa10.78□□□□□ -0.68
SMARCE1-207ENST00000469334 KIF2AO00139 706 aaPredicted RBP10.78□□□□□ -0.68
SMARCE1-207ENST00000469334 NEMFO60524 1076 aa10.78□□□□□ -0.68
SMARCE1-207ENST00000469334 MCCP23508 829 aa10.78□□□□□ -0.68
SMARCE1-207ENST00000469334 FBXO38Q6PIJ6 1188 aa10.78□□□□□ -0.68
SMARCE1-207ENST00000469334 ATP6V1DQ9Y5K8 247 aa10.78□□□□□ -0.68
SMARCE1-207ENST00000469334 SSH2Q76I76 1423 aa10.77□□□□□ -0.68
SMARCE1-207ENST00000469334 PSEN1P49768 467 aa10.77□□□□□ -0.69
SMARCE1-207ENST00000469334 FOXD4L5Q5VV16 416 aaPredicted RBP10.77□□□□□ -0.69
SMARCE1-207ENST00000469334 SPC24Q8NBT2 197 aa10.77□□□□□ -0.69
SMARCE1-207ENST00000469334 FAM200AQ8TCP9 573 aa10.77□□□□□ -0.69
SMARCE1-207ENST00000469334 FOXD4L4Q8WXT5 416 aaPredicted RBP10.77□□□□□ -0.69
SMARCE1-207ENST00000469334 RSPH14Q9UHP6 348 aa10.77□□□□□ -0.69
SMARCE1-207ENST00000469334 ABCC4O15439 1325 aa10.77□□□□□ -0.69
SMARCE1-207ENST00000469334 AP5Z1O43299 807 aa10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 GTF2A1P52655 376 aaPredicted RBP10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 PLCB2Q00722 1185 aa10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 TPD52L1Q16890 204 aaPredicted RBP10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 ZNF622Q969S3 477 aaKnown RBP eCLIP10.76□□□□□ -0.698e-14■■■□□ 17.5
SMARCE1-207ENST00000469334 MYCBPQ99417 103 aaPredicted RBP10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 DCTPP1Q9H773 170 aa10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 SETBP1Q9Y6X0 1596 aa10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 ANKRD26Q9UPS8 1709 aa10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 ABCA9Q8IUA7 1624 aa10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 FAM135BQ49AJ0 1406 aa10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 DHX16O60231 1041 aaKnown RBP10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 CDC25BP30305 580 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms