RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 LRRC4BQ9NT99 713 aa20.17■□□□□ 0.82
COL16A1-208ENST00000468459 FAM208AQ9UK61 1670 aaKnown RBP20.16■□□□□ 0.82
COL16A1-208ENST00000468459 AMER1Q5JTC6 1135 aaPredicted RBP20.16■□□□□ 0.82
COL16A1-208ENST00000468459 ZCRB1Q8TBF4 217 aaKnown RBP20.16■□□□□ 0.82
COL16A1-208ENST00000468459 INSRP06213 1382 aa20.16■□□□□ 0.82
COL16A1-208ENST00000468459 KIF24Q5T7B8 1368 aa20.16■□□□□ 0.82
COL16A1-208ENST00000468459 CASZ1Q86V15 1759 aa20.16■□□□□ 0.82
COL16A1-208ENST00000468459 ZNF316A6NFI3 1004 aaPredicted RBP20.15■□□□□ 0.82
COL16A1-208ENST00000468459 ZBTB7AO95365 584 aa20.15■□□□□ 0.82
COL16A1-208ENST00000468459 CNGB1Q14028 1251 aaPredicted RBP20.14■□□□□ 0.81
COL16A1-208ENST00000468459 UTRNP46939 3433 aa20.14■□□□□ 0.81
COL16A1-208ENST00000468459 ANKRD26Q9UPS8 1709 aa20.13■□□□□ 0.81
COL16A1-208ENST00000468459 NSD2O96028 1365 aa20.13■□□□□ 0.81
COL16A1-208ENST00000468459 FLT4P35916 1363 aa20.13■□□□□ 0.81
COL16A1-208ENST00000468459 PRIM1P49642 420 aaKnown RBP20.13■□□□□ 0.81
COL16A1-208ENST00000468459 DDX10Q13206 875 aaKnown RBP20.13■□□□□ 0.81
COL16A1-208ENST00000468459 ZNF827Q17R98 1081 aa20.13■□□□□ 0.81
COL16A1-208ENST00000468459 USHBP1Q8N6Y0 703 aa20.13■□□□□ 0.81
COL16A1-208ENST00000468459 SGIP1Q9BQI5 828 aa20.13■□□□□ 0.81
COL16A1-208ENST00000468459 PPP1R1BQ9UD71 204 aaPredicted RBP20.13■□□□□ 0.81
COL16A1-208ENST00000468459 PAPPAQ13219 1627 aa20.13■□□□□ 0.81
COL16A1-208ENST00000468459 EMILIN1Q9Y6C2 1016 aa20.12■□□□□ 0.81
COL16A1-208ENST00000468459 TNNT2P45379 298 aaPredicted RBP20.11■□□□□ 0.81
COL16A1-208ENST00000468459 SLC27A3Q5K4L6 730 aa20.11■□□□□ 0.81
COL16A1-208ENST00000468459 CC2D1BQ5T0F9 858 aaKnown RBP20.11■□□□□ 0.81
COL16A1-208ENST00000468459 AKT1S1Q96B36 256 aa20.11■□□□□ 0.81
COL16A1-208ENST00000468459 ATF5Q9Y2D1 282 aaPredicted RBP20.11■□□□□ 0.81
COL16A1-208ENST00000468459 MTFR1LQ9H019 292 aa20.1■□□□□ 0.81
COL16A1-208ENST00000468459 SMG6Q86US8 1419 aaKnown RBP20.1■□□□□ 0.81
COL16A1-208ENST00000468459 RAPGEF4Q8WZA2 1011 aa20.09■□□□□ 0.81
COL16A1-208ENST00000468459 BTAF1O14981 1849 aa20.09■□□□□ 0.81
COL16A1-208ENST00000468459 MORC1Q86VD1 984 aa20.08■□□□□ 0.81
COL16A1-208ENST00000468459 SYTL4Q96C24 671 aaPredicted RBP20.08■□□□□ 0.81
COL16A1-208ENST00000468459 TATP17735 454 aaPredicted RBP20.07■□□□□ 0.8
COL16A1-208ENST00000468459 NCAPD2Q15021 1401 aa20.06■□□□□ 0.8
COL16A1-208ENST00000468459 NPC1L1Q9UHC9 1359 aa20.06■□□□□ 0.8
COL16A1-208ENST00000468459 RGPD2P0DJD1 1756 aa20.06■□□□□ 0.8
COL16A1-208ENST00000468459 SHANK3Q9BYB0 1731 aa20.05■□□□□ 0.8
COL16A1-208ENST00000468459 KCNQ4P56696 695 aa20.05■□□□□ 0.8
COL16A1-208ENST00000468459 POLKQ9UBT6 870 aa20.05■□□□□ 0.8
COL16A1-208ENST00000468459 CYP27B1O15528 508 aa20.04■□□□□ 0.8
COL16A1-208ENST00000468459 SYT17Q9BSW7 474 aa20.03■□□□□ 0.8
COL16A1-208ENST00000468459 PNPLA7Q6ZV29 1317 aa20.02■□□□□ 0.8
COL16A1-208ENST00000468459 PCDH11XQ9BZA7 1347 aa20.02■□□□□ 0.8
COL16A1-208ENST00000468459 PCDH11YQ9BZA8 1340 aa20.02■□□□□ 0.8
COL16A1-208ENST00000468459 FHDC1Q9C0D6 1143 aaPredicted RBP20.02■□□□□ 0.8
COL16A1-208ENST00000468459 PPM1GO15355 546 aaPredicted RBP20.01■□□□□ 0.79
COL16A1-208ENST00000468459 EYA1Q99502 592 aa20.01■□□□□ 0.79
COL16A1-208ENST00000468459 SLC16A10Q8TF71 515 aa20■□□□□ 0.79
COL16A1-208ENST00000468459 CCNL1Q9UK58 526 aaPredicted RBP20■□□□□ 0.79
COL16A1-208ENST00000468459 NKX1-1Q15270 411 aaPredicted RBP19.99■□□□□ 0.79
COL16A1-208ENST00000468459 ARXQ96QS3 562 aa19.99■□□□□ 0.79
COL16A1-208ENST00000468459 DOT1LQ8TEK3 1739 aa19.99■□□□□ 0.79
COL16A1-208ENST00000468459 TFCP2L1Q9NZI6 479 aa19.98■□□□□ 0.79
COL16A1-208ENST00000468459 MAP2P11137 1827 aaKnown RBP19.97■□□□□ 0.79
COL16A1-208ENST00000468459 MAP3K5Q99683 1374 aa19.97■□□□□ 0.79
COL16A1-208ENST00000468459 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.97■□□□□ 0.795e-7■■■■■ 31.6
COL16A1-208ENST00000468459 KAT6BQ8WYB5 2073 aa19.97■□□□□ 0.79
COL16A1-208ENST00000468459 YY1P25490 414 aa19.96■□□□□ 0.79
COL16A1-208ENST00000468459 EIF4A2Q14240 407 aaKnown RBP19.96■□□□□ 0.79
COL16A1-208ENST00000468459 MPRIPQ6WCQ1 1025 aa19.95■□□□□ 0.78
COL16A1-208ENST00000468459 LY75O60449 1722 aa19.95■□□□□ 0.78
COL16A1-208ENST00000468459 DCAF8L1A6NGE4 600 aa19.94■□□□□ 0.78
COL16A1-208ENST00000468459 SPG7Q9UQ90 795 aa19.94■□□□□ 0.78
COL16A1-208ENST00000468459 PALLDQ8WX93 1383 aa19.94■□□□□ 0.78
COL16A1-208ENST00000468459 COL23A1Q86Y22 540 aaPredicted RBP19.93■□□□□ 0.78
COL16A1-208ENST00000468459 PIGBQ92521 554 aa19.93■□□□□ 0.78
COL16A1-208ENST00000468459 GOLGB1Q14789 3259 aaKnown RBP19.92■□□□□ 0.78
COL16A1-208ENST00000468459 MTHFSP49914 203 aa19.92■□□□□ 0.78
COL16A1-208ENST00000468459 PHKG2P15735 406 aa19.91■□□□□ 0.78
COL16A1-208ENST00000468459 IGSF1Q8N6C5 1336 aa19.91■□□□□ 0.78
COL16A1-208ENST00000468459 PKD1L3Q7Z443 1732 aa19.9■□□□□ 0.78
COL16A1-208ENST00000468459 PPP2R1AP30153 589 aa19.9■□□□□ 0.78
COL16A1-208ENST00000468459 SMARCC1Q92922 1105 aaPredicted RBP19.9■□□□□ 0.78
COL16A1-208ENST00000468459 PLEKHG2Q9H7P9 1386 aa19.9■□□□□ 0.78
COL16A1-208ENST00000468459 QSER1Q2KHR3 1735 aa19.9■□□□□ 0.78
COL16A1-208ENST00000468459 POLD1P28340 1107 aa19.89■□□□□ 0.77
COL16A1-208ENST00000468459 IFNL2Q8IZJ0 200 aa19.89■□□□□ 0.77
COL16A1-208ENST00000468459 TOGARAM1Q9Y4F4 1720 aa19.88■□□□□ 0.77
COL16A1-208ENST00000468459 AMIGO3Q86WK7 504 aa19.88■□□□□ 0.77
COL16A1-208ENST00000468459 COL3A1P02461 1466 aaPredicted RBP19.87■□□□□ 0.77
COL16A1-208ENST00000468459 HMGB2P26583 209 aaKnown RBP19.87■□□□□ 0.77
COL16A1-208ENST00000468459 COL24A1Q17RW2 1714 aa19.87■□□□□ 0.77
COL16A1-208ENST00000468459 RALBP1Q15311 655 aa19.85■□□□□ 0.77
COL16A1-208ENST00000468459 TUBGCP6Q96RT7 1819 aa19.84■□□□□ 0.77
COL16A1-208ENST00000468459 LOC102724428A0A0B4J2F2 783 aa19.84■□□□□ 0.77
COL16A1-208ENST00000468459 SIK1P57059 783 aa19.84■□□□□ 0.77
COL16A1-208ENST00000468459 PRKRIP1Q9H875 184 aaPredicted RBP19.84■□□□□ 0.77
COL16A1-208ENST00000468459 TMOD3Q9NYL9 352 aa19.84■□□□□ 0.77
COL16A1-208ENST00000468459 ASAP1Q9ULH1 1129 aa19.84■□□□□ 0.77
COL16A1-208ENST00000468459 FLAD1Q8NFF5 587 aa19.83■□□□□ 0.77
COL16A1-208ENST00000468459 NLGN2Q8NFZ4 835 aa19.83■□□□□ 0.77
COL16A1-208ENST00000468459 ATG3Q9NT62 314 aa19.83■□□□□ 0.77
COL16A1-208ENST00000468459 IL13P35225 146 aa19.82■□□□□ 0.76
COL16A1-208ENST00000468459 LINC00116Q8NCU8 138 aa19.82■□□□□ 0.76
COL16A1-208ENST00000468459 MSH5O43196 834 aa19.81■□□□□ 0.76
COL16A1-208ENST00000468459 ITPK1Q13572 414 aa19.81■□□□□ 0.76
COL16A1-208ENST00000468459 MSL1Q68DK7 614 aa19.81■□□□□ 0.76
COL16A1-208ENST00000468459 AEBP1Q8IUX7 1158 aa19.81■□□□□ 0.76
COL16A1-208ENST00000468459 MYBBP1AQ9BQG0 1328 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms