RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 ZCRB1Q8TBF4 217 aaKnown RBP19.99■□□□□ 0.79
COMMD3-206ENST00000468179 DDX54Q8TDD1 881 aaKnown RBP19.99■□□□□ 0.79
COMMD3-206ENST00000468179 TATP17735 454 aaPredicted RBP19.98■□□□□ 0.79
COMMD3-206ENST00000468179 MORC1Q86VD1 984 aa19.98■□□□□ 0.79
COMMD3-206ENST00000468179 POLKQ9UBT6 870 aa19.98■□□□□ 0.79
COMMD3-206ENST00000468179 TNNT2P45379 298 aaPredicted RBP19.97■□□□□ 0.79
COMMD3-206ENST00000468179 PSDA5PKW4 1024 aaPredicted RBP19.94■□□□□ 0.78
COMMD3-206ENST00000468179 R3HDM1Q15032 1099 aaKnown RBP19.94■□□□□ 0.78
COMMD3-206ENST00000468179 USHBP1Q8N6Y0 703 aa19.94■□□□□ 0.78
COMMD3-206ENST00000468179 ACSBG1Q96GR2 724 aa19.94■□□□□ 0.78
COMMD3-206ENST00000468179 KCNQ2O43526 872 aa19.92■□□□□ 0.78
COMMD3-206ENST00000468179 PTF1AQ7RTS3 328 aa19.92■□□□□ 0.78
COMMD3-206ENST00000468179 SBF2Q86WG5 1849 aa19.91■□□□□ 0.78
COMMD3-206ENST00000468179 MEGF6O75095 1541 aa19.9■□□□□ 0.78
COMMD3-206ENST00000468179 PCDH11XQ9BZA7 1347 aa19.9■□□□□ 0.78
COMMD3-206ENST00000468179 PCDH11YQ9BZA8 1340 aa19.9■□□□□ 0.78
COMMD3-206ENST00000468179 ANKRD26Q9UPS8 1709 aa19.89■□□□□ 0.78
COMMD3-206ENST00000468179 TXNRD1Q16881 649 aa19.89■□□□□ 0.77
COMMD3-206ENST00000468179 AMER1Q5JTC6 1135 aaPredicted RBP19.89■□□□□ 0.77
COMMD3-206ENST00000468179 EYA1Q99502 592 aa19.89■□□□□ 0.77
COMMD3-206ENST00000468179 RGPD3A6NKT7 1758 aaPredicted RBP19.89■□□□□ 0.77
COMMD3-206ENST00000468179 RGPD4Q7Z3J3 1758 aa19.89■□□□□ 0.77
COMMD3-206ENST00000468179 SPG7Q9UQ90 795 aa19.88■□□□□ 0.77
COMMD3-206ENST00000468179 RREB1Q92766 1687 aa19.87■□□□□ 0.77
COMMD3-206ENST00000468179 EIF4A2Q14240 407 aaKnown RBP19.87■□□□□ 0.77
COMMD3-206ENST00000468179 SYTL4Q96C24 671 aaPredicted RBP19.87■□□□□ 0.77
COMMD3-206ENST00000468179 MAP2P11137 1827 aaKnown RBP19.87■□□□□ 0.77
COMMD3-206ENST00000468179 NHSQ6T4R5 1651 aa19.86■□□□□ 0.77
COMMD3-206ENST00000468179 PER1O15534 1290 aaPredicted RBP19.86■□□□□ 0.77
COMMD3-206ENST00000468179 PRIM1P49642 420 aaKnown RBP19.86■□□□□ 0.77
COMMD3-206ENST00000468179 PROM2Q8N271 834 aa19.86■□□□□ 0.77
COMMD3-206ENST00000468179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.86■□□□□ 0.77
COMMD3-206ENST00000468179 NCAPD2Q15021 1401 aa19.85■□□□□ 0.77
COMMD3-206ENST00000468179 RGPD2P0DJD1 1756 aa19.85■□□□□ 0.77
COMMD3-206ENST00000468179 HMGB2P26583 209 aaKnown RBP19.84■□□□□ 0.77
COMMD3-206ENST00000468179 STK32BQ9NY57 414 aa19.84■□□□□ 0.77
COMMD3-206ENST00000468179 PLEKHG2Q9H7P9 1386 aa19.84■□□□□ 0.77
COMMD3-206ENST00000468179 NUP188Q5SRE5 1749 aa19.83■□□□□ 0.76
COMMD3-206ENST00000468179 SLC27A3Q5K4L6 730 aa19.82■□□□□ 0.76
COMMD3-206ENST00000468179 NPC1L1Q9UHC9 1359 aa19.82■□□□□ 0.76
COMMD3-206ENST00000468179 CC2D1BQ5T0F9 858 aaKnown RBP19.81■□□□□ 0.76
COMMD3-206ENST00000468179 IGSF1Q8N6C5 1336 aa19.81■□□□□ 0.76
COMMD3-206ENST00000468179 CYP27B1O15528 508 aa19.8■□□□□ 0.76
COMMD3-206ENST00000468179 NKX1-1Q15270 411 aaPredicted RBP19.78■□□□□ 0.76
COMMD3-206ENST00000468179 SLC15A2Q16348 729 aa19.78■□□□□ 0.76
COMMD3-206ENST00000468179 IFNL2Q8IZJ0 200 aa19.78■□□□□ 0.76
COMMD3-206ENST00000468179 MTHFSP49914 203 aa19.77■□□□□ 0.76
COMMD3-206ENST00000468179 AMOTQ4VCS5 1084 aa19.77■□□□□ 0.76
COMMD3-206ENST00000468179 PLEKHO1Q53GL0 409 aaPredicted RBP19.77■□□□□ 0.76
COMMD3-206ENST00000468179 ANO8Q9HCE9 1232 aaPredicted RBP19.77■□□□□ 0.76
COMMD3-206ENST00000468179 LRP5O75197 1615 aa19.77■□□□□ 0.76
COMMD3-206ENST00000468179 SPON1Q9HCB6 807 aa19.76■□□□□ 0.75
COMMD3-206ENST00000468179 U3KPZ7 1027 aaPredicted RBP19.76■□□□□ 0.75
COMMD3-206ENST00000468179 KAT6BQ8WYB5 2073 aa19.76■□□□□ 0.75
COMMD3-206ENST00000468179 BTAF1O14981 1849 aa19.76■□□□□ 0.75
COMMD3-206ENST00000468179 HSP90AB1P08238 724 aaKnown RBP19.76■□□□□ 0.75
COMMD3-206ENST00000468179 SHANK3Q9BYB0 1731 aa19.75■□□□□ 0.75
COMMD3-206ENST00000468179 PHKG2P15735 406 aa19.75■□□□□ 0.75
COMMD3-206ENST00000468179 IL13P35225 146 aa19.75■□□□□ 0.75
COMMD3-206ENST00000468179 MPRIPQ6WCQ1 1025 aa19.75■□□□□ 0.75
COMMD3-206ENST00000468179 SMARCC1Q92922 1105 aaPredicted RBP19.75■□□□□ 0.75
COMMD3-206ENST00000468179 PKD1L3Q7Z443 1732 aa19.73■□□□□ 0.75
COMMD3-206ENST00000468179 DOT1LQ8TEK3 1739 aa19.73■□□□□ 0.75
COMMD3-206ENST00000468179 DIAPH1O60610 1272 aaKnown RBP19.73■□□□□ 0.75
COMMD3-206ENST00000468179 SULT6B1Q6IMI4 303 aa19.73■□□□□ 0.75
COMMD3-206ENST00000468179 LRRC4BQ9NT99 713 aa19.73■□□□□ 0.75
COMMD3-206ENST00000468179 CCNL1Q9UK58 526 aaPredicted RBP19.73■□□□□ 0.75
COMMD3-206ENST00000468179 CNGB1Q14028 1251 aaPredicted RBP19.72■□□□□ 0.75
COMMD3-206ENST00000468179 C1orf141Q5JVX7 400 aa19.71■□□□□ 0.75
COMMD3-206ENST00000468179 DCAF5Q96JK2 942 aa19.71■□□□□ 0.75
COMMD3-206ENST00000468179 TMOD3Q9NYL9 352 aa19.71■□□□□ 0.75
COMMD3-206ENST00000468179 PPP1R1BQ9UD71 204 aaPredicted RBP19.71■□□□□ 0.75
COMMD3-206ENST00000468179 ZNF530Q6P9A1 599 aaPredicted RBP19.7■□□□□ 0.74
COMMD3-206ENST00000468179 KDRP35968 1356 aa19.69■□□□□ 0.74
COMMD3-206ENST00000468179 PIGBQ92521 554 aa19.69■□□□□ 0.74
COMMD3-206ENST00000468179 AKT1S1Q96B36 256 aa19.69■□□□□ 0.74
COMMD3-206ENST00000468179 CFAP53Q96M91 514 aa19.69■□□□□ 0.74
COMMD3-206ENST00000468179 PALLDQ8WX93 1383 aa19.68■□□□□ 0.74
COMMD3-206ENST00000468179 ERVV-2B6SEH9 535 aa19.68■□□□□ 0.74
COMMD3-206ENST00000468179 AEBP1Q8IUX7 1158 aa19.68■□□□□ 0.74
COMMD3-206ENST00000468179 TFCP2L1Q9NZI6 479 aa19.68■□□□□ 0.74
COMMD3-206ENST00000468179 MTFR1LQ9H019 292 aa19.67■□□□□ 0.74
COMMD3-206ENST00000468179 ZBTB7AO95365 584 aa19.66■□□□□ 0.74
COMMD3-206ENST00000468179 ZNF827Q17R98 1081 aa19.66■□□□□ 0.74
COMMD3-206ENST00000468179 SLC16A10Q8TF71 515 aa19.66■□□□□ 0.74
COMMD3-206ENST00000468179 KCNQ4P56696 695 aa19.64■□□□□ 0.73
COMMD3-206ENST00000468179 CABP4P57796 275 aa19.64■□□□□ 0.73
COMMD3-206ENST00000468179 PAPPAQ13219 1627 aa19.64■□□□□ 0.73
COMMD3-206ENST00000468179 U2SURPO15042 1029 aaKnown RBP19.63■□□□□ 0.73
COMMD3-206ENST00000468179 SLC4A2P04920 1241 aa19.63■□□□□ 0.73
COMMD3-206ENST00000468179 HMOX1P09601 288 aa19.63■□□□□ 0.73
COMMD3-206ENST00000468179 PDGFDQ9GZP0 370 aaPredicted RBP19.63■□□□□ 0.73
COMMD3-206ENST00000468179 NUDCQ9Y266 331 aa19.63■□□□□ 0.73
COMMD3-206ENST00000468179 ATF5Q9Y2D1 282 aaPredicted RBP19.63■□□□□ 0.73
COMMD3-206ENST00000468179 LY75O60449 1722 aa19.62■□□□□ 0.73
COMMD3-206ENST00000468179 AKAP4Q5JQC9 854 aa19.62■□□□□ 0.73
COMMD3-206ENST00000468179 FLAD1Q8NFF5 587 aa19.62■□□□□ 0.73
COMMD3-206ENST00000468179 LOC102724428A0A0B4J2F2 783 aa19.61■□□□□ 0.73
COMMD3-206ENST00000468179 SIK1P57059 783 aa19.61■□□□□ 0.73
COMMD3-206ENST00000468179 CASZ1Q86V15 1759 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms