RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 ADAMTSL3P82987 1691 aa14.44□□□□□ -0.1
HPS1-208ENST00000467246 VIRMAQ69YN4 1812 aaKnown RBP14.44□□□□□ -0.1
HPS1-208ENST00000467246 ZNF142P52746 1687 aaPredicted RBP14.44□□□□□ -0.1
HPS1-208ENST00000467246 ESCO1Q5FWF5 840 aa14.44□□□□□ -0.1
HPS1-208ENST00000467246 RTF1Q92541 710 aaKnown RBP14.44□□□□□ -0.1
HPS1-208ENST00000467246 API5Q9BZZ5 524 aaKnown RBP14.44□□□□□ -0.1
HPS1-208ENST00000467246 MARF1Q9Y4F3 1742 aaKnown RBP14.43□□□□□ -0.1
HPS1-208ENST00000467246 RTL5Q5HYW3 569 aaPredicted RBP14.43□□□□□ -0.1
HPS1-208ENST00000467246 KIAA0232Q92628 1395 aa14.42□□□□□ -0.1
HPS1-208ENST00000467246 NUCB1Q02818 461 aa14.42□□□□□ -0.1
HPS1-208ENST00000467246 SETD1BQ9UPS6 1966 aaKnown RBP14.42□□□□□ -0.1
HPS1-208ENST00000467246 PSME1Q06323 249 aa14.41□□□□□ -0.1
HPS1-208ENST00000467246 SIRT2Q8IXJ6 389 aa14.41□□□□□ -0.1
HPS1-208ENST00000467246 GAS2L2Q8NHY3 880 aa14.41□□□□□ -0.1
HPS1-208ENST00000467246 LNPKQ9C0E8 428 aa14.41□□□□□ -0.1
HPS1-208ENST00000467246 CHMP4BQ9H444 224 aaKnown RBP14.41□□□□□ -0.1
HPS1-208ENST00000467246 DAXXQ9UER7 740 aaPredicted RBP14.41□□□□□ -0.1
HPS1-208ENST00000467246 ADGRL3Q9HAR2 1447 aa14.41□□□□□ -0.1
HPS1-208ENST00000467246 TSPYL4Q9UJ04 414 aa14.41□□□□□ -0.1
HPS1-208ENST00000467246 NPHP4O75161 1426 aaPredicted RBP14.4□□□□□ -0.1
HPS1-208ENST00000467246 KIF24Q5T7B8 1368 aa14.4□□□□□ -0.1
HPS1-208ENST00000467246 HAP1P54257 671 aaPredicted RBP14.4□□□□□ -0.1
HPS1-208ENST00000467246 USHBP1Q8N6Y0 703 aa14.4□□□□□ -0.1
HPS1-208ENST00000467246 CHD1LQ86WJ1 897 aa14.39□□□□□ -0.11
HPS1-208ENST00000467246 ORAI2Q96SN7 254 aa14.39□□□□□ -0.11
HPS1-208ENST00000467246 NWD1Q149M9 1564 aa14.39□□□□□ -0.11
HPS1-208ENST00000467246 SLC4A2P04920 1241 aa14.39□□□□□ -0.11
HPS1-208ENST00000467246 RGS12O14924 1447 aa14.38□□□□□ -0.11
HPS1-208ENST00000467246 XPCQ01831 940 aaPredicted RBP14.38□□□□□ -0.11
HPS1-208ENST00000467246 ANKRD45Q5TZF3 282 aa14.38□□□□□ -0.11
HPS1-208ENST00000467246 INTS3Q68E01 1043 aaKnown RBP14.38□□□□□ -0.11
HPS1-208ENST00000467246 GNAT3A8MTJ3 354 aa14.38□□□□□ -0.11
HPS1-208ENST00000467246 PLEKHG5O94827 1062 aa14.38□□□□□ -0.11
HPS1-208ENST00000467246 USP54Q70EL1 1684 aa14.37□□□□□ -0.11
HPS1-208ENST00000467246 ZBTB7CA1YPR0 619 aa14.37□□□□□ -0.11
HPS1-208ENST00000467246 IL17REQ8NFR9 667 aa14.37□□□□□ -0.11
HPS1-208ENST00000467246 IP6K1Q92551 441 aa14.37□□□□□ -0.11
HPS1-208ENST00000467246 GCC1Q96CN9 775 aa14.37□□□□□ -0.11
HPS1-208ENST00000467246 UPF2Q9HAU5 1272 aaKnown RBP14.37□□□□□ -0.11
HPS1-208ENST00000467246 HTATSF1O43719 755 aaKnown RBP14.36□□□□□ -0.11
HPS1-208ENST00000467246 TBC1D32Q96NH3 1257 aa14.36□□□□□ -0.11
HPS1-208ENST00000467246 G2E3Q7L622 706 aa14.36□□□□□ -0.11
HPS1-208ENST00000467246 NBPF6Q5VWK0 638 aa14.35□□□□□ -0.11
HPS1-208ENST00000467246 NBPF4Q96M43 638 aa14.35□□□□□ -0.11
HPS1-208ENST00000467246 PTPRCP08575 1304 aa14.35□□□□□ -0.11
HPS1-208ENST00000467246 RTL1A6NKG5 1358 aa14.35□□□□□ -0.11
HPS1-208ENST00000467246 NFAT5O94916 1531 aa14.34□□□□□ -0.11
HPS1-208ENST00000467246 MSH6P52701 1360 aa14.34□□□□□ -0.11
HPS1-208ENST00000467246 MAP3K5Q99683 1374 aa14.34□□□□□ -0.11
HPS1-208ENST00000467246 PROSER2Q86WR7 435 aaPredicted RBP14.34□□□□□ -0.11
HPS1-208ENST00000467246 F6X3S4 739 aa14.33□□□□□ -0.12
HPS1-208ENST00000467246 MFAP1P55081 439 aaKnown RBP14.33□□□□□ -0.12
HPS1-208ENST00000467246 LMOD2Q6P5Q4 547 aa14.33□□□□□ -0.12
HPS1-208ENST00000467246 KCNH5Q8NCM2 988 aa14.33□□□□□ -0.12
HPS1-208ENST00000467246 LTN1O94822 1766 aa14.33□□□□□ -0.12
HPS1-208ENST00000467246 MEIS3Q99687 375 aa14.33□□□□□ -0.12
HPS1-208ENST00000467246 NECTIN2Q92692 538 aa14.32□□□□□ -0.12
HPS1-208ENST00000467246 LRRC59Q96AG4 307 aaKnown RBP14.32□□□□□ -0.12
HPS1-208ENST00000467246 GCP02774 474 aa14.32□□□□□ -0.12
HPS1-208ENST00000467246 SLC4A10Q6U841 1118 aa14.32□□□□□ -0.12
HPS1-208ENST00000467246 TAF7Q15545 349 aaPredicted RBP14.31□□□□□ -0.12
HPS1-208ENST00000467246 ANKRD44Q8N8A2 993 aa14.31□□□□□ -0.12
HPS1-208ENST00000467246 ATP10DQ9P241 1426 aa14.31□□□□□ -0.12
HPS1-208ENST00000467246 DCTPP1Q9H773 170 aa14.3□□□□□ -0.12
HPS1-208ENST00000467246 BRPF3Q9ULD4 1205 aa14.3□□□□□ -0.12
HPS1-208ENST00000467246 LRRC37A3O60309 1634 aa14.3□□□□□ -0.12
HPS1-208ENST00000467246 BMP2KLQ5H9B9 411 aa14.3□□□□□ -0.12
HPS1-208ENST00000467246 CEP85Q6P2H3 762 aa14.3□□□□□ -0.12
HPS1-208ENST00000467246 STK31Q9BXU1 1019 aa14.3□□□□□ -0.12
HPS1-208ENST00000467246 C22orf23Q9BZE7 217 aa14.3□□□□□ -0.12
HPS1-208ENST00000467246 ARHGEF25Q86VW2 580 aa14.29□□□□□ -0.12
HPS1-208ENST00000467246 EIF5BO60841 1220 aaKnown RBP14.29□□□□□ -0.12
HPS1-208ENST00000467246 BECN1Q14457 450 aa14.29□□□□□ -0.12
HPS1-208ENST00000467246 LGR6Q9HBX8 967 aa14.29□□□□□ -0.12
HPS1-208ENST00000467246 CCDC30Q5VVM6 783 aa14.28□□□□□ -0.12
HPS1-208ENST00000467246 KRT28Q7Z3Y7 464 aa14.28□□□□□ -0.12
HPS1-208ENST00000467246 RPAP2Q8IXW5 612 aaPredicted RBP14.28□□□□□ -0.12
HPS1-208ENST00000467246 NFKBIBQ15653 356 aa14.28□□□□□ -0.12
HPS1-208ENST00000467246 FLIIQ13045 1269 aa14.28□□□□□ -0.12
HPS1-208ENST00000467246 C19orf44Q9H6X5 657 aa14.28□□□□□ -0.12
HPS1-208ENST00000467246 USP35Q9P2H5 1018 aa14.28□□□□□ -0.12
HPS1-208ENST00000467246 TBC1D2Q9BYX2 928 aa14.27□□□□□ -0.12
HPS1-208ENST00000467246 FKBP5Q13451 457 aaPredicted RBP14.27□□□□□ -0.13
HPS1-208ENST00000467246 C16orf71Q8IYS4 520 aaPredicted RBP14.27□□□□□ -0.13
HPS1-208ENST00000467246 CEMIPQ8WUJ3 1361 aa14.26□□□□□ -0.13
HPS1-208ENST00000467246 C1orf167Q5SNV9 1468 aa14.26□□□□□ -0.13
HPS1-208ENST00000467246 CCT4P50991 539 aaKnown RBP14.26□□□□□ -0.13
HPS1-208ENST00000467246 BABAM1Q9NWV8 329 aa14.26□□□□□ -0.13
HPS1-208ENST00000467246 AXIN2Q9Y2T1 843 aa14.26□□□□□ -0.13
HPS1-208ENST00000467246 RGPD2P0DJD1 1756 aa14.25□□□□□ -0.13
HPS1-208ENST00000467246 APBB1O00213 710 aa14.25□□□□□ -0.13
HPS1-208ENST00000467246 PLEKHM2Q8IWE5 1019 aa14.25□□□□□ -0.13
HPS1-208ENST00000467246 ANKRD24Q8TF21 1146 aa14.25□□□□□ -0.13
HPS1-208ENST00000467246 ZNF530Q6P9A1 599 aaPredicted RBP14.25□□□□□ -0.13
HPS1-208ENST00000467246 DDX17Q92841 729 aaKnown RBP14.25□□□□□ -0.13
HPS1-208ENST00000467246 SLKQ9H2G2 1235 aaPredicted RBP14.25□□□□□ -0.13
HPS1-208ENST00000467246 MPRIPQ6WCQ1 1025 aa14.24□□□□□ -0.13
HPS1-208ENST00000467246 OTUD7AQ8TE49 926 aaPredicted RBP14.24□□□□□ -0.13
HPS1-208ENST00000467246 SLIT3O75094 1523 aa14.24□□□□□ -0.13
HPS1-208ENST00000467246 SMARCA5O60264 1052 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms