RNA–Protein interactions for RNA: ENST00000466822.1

ABCD4-204, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-204ENST00000466822 IGSF1Q8N6C5 1336 aa19.48■□□□□ 0.71
ABCD4-204ENST00000466822 EN1Q05925 392 aaPredicted RBP19.47■□□□□ 0.71
ABCD4-204ENST00000466822 USHBP1Q8N6Y0 703 aa19.47■□□□□ 0.71
ABCD4-204ENST00000466822 PCDH11XQ9BZA7 1347 aa19.47■□□□□ 0.71
ABCD4-204ENST00000466822 PCDH11YQ9BZA8 1340 aa19.47■□□□□ 0.71
ABCD4-204ENST00000466822 HMGB2P26583 209 aaKnown RBP19.45■□□□□ 0.7
ABCD4-204ENST00000466822 IL13P35225 146 aa19.44■□□□□ 0.7
ABCD4-204ENST00000466822 AMOTQ4VCS5 1084 aa19.44■□□□□ 0.7
ABCD4-204ENST00000466822 CFAP53Q96M91 514 aa19.44■□□□□ 0.7
ABCD4-204ENST00000466822 MEGF6O75095 1541 aa19.44■□□□□ 0.7
ABCD4-204ENST00000466822 DIAPH1O60610 1272 aaKnown RBP19.43■□□□□ 0.7
ABCD4-204ENST00000466822 NKX1-1Q15270 411 aaPredicted RBP19.42■□□□□ 0.7
ABCD4-204ENST00000466822 EZH2Q15910 746 aaKnown RBP19.42■□□□□ 0.7
ABCD4-204ENST00000466822 PLEKHO1Q53GL0 409 aaPredicted RBP19.42■□□□□ 0.7
ABCD4-204ENST00000466822 NBPF14Q5TI25 921 aa19.41■□□□□ 0.7
ABCD4-204ENST00000466822 HSP90AB1P08238 724 aaKnown RBP19.4■□□□□ 0.7
ABCD4-204ENST00000466822 IFNL2Q8IZJ0 200 aa19.4■□□□□ 0.7
ABCD4-204ENST00000466822 KDRP35968 1356 aa19.4■□□□□ 0.7
ABCD4-204ENST00000466822 KCNQ2O43526 872 aa19.39■□□□□ 0.69
ABCD4-204ENST00000466822 ACSBG1Q96GR2 724 aa19.39■□□□□ 0.69
ABCD4-204ENST00000466822 CYP27B1O15528 508 aa19.38■□□□□ 0.69
ABCD4-204ENST00000466822 RALBP1Q15311 655 aa19.38■□□□□ 0.69
ABCD4-204ENST00000466822 SULT6B1Q6IMI4 303 aa19.38■□□□□ 0.69
ABCD4-204ENST00000466822 TNS1Q9HBL0 1735 aaKnown RBP19.38■□□□□ 0.69
ABCD4-204ENST00000466822 NUDCQ9Y266 331 aa19.38■□□□□ 0.69
ABCD4-204ENST00000466822 RGPD2P0DJD1 1756 aa19.37■□□□□ 0.69
ABCD4-204ENST00000466822 PPP2R1AP30153 589 aa19.37■□□□□ 0.69
ABCD4-204ENST00000466822 PRIM1P49642 420 aaKnown RBP19.37■□□□□ 0.69
ABCD4-204ENST00000466822 DDX10Q13206 875 aaKnown RBP19.36■□□□□ 0.69
ABCD4-204ENST00000466822 SBF2Q86WG5 1849 aa19.35■□□□□ 0.69
ABCD4-204ENST00000466822 PHKG2P15735 406 aa19.35■□□□□ 0.69
ABCD4-204ENST00000466822 CNGB1Q14028 1251 aaPredicted RBP19.35■□□□□ 0.69
ABCD4-204ENST00000466822 SLC27A3Q5K4L6 730 aa19.35■□□□□ 0.69
ABCD4-204ENST00000466822 TXNRD1Q16881 649 aa19.34■□□□□ 0.69
ABCD4-204ENST00000466822 PTF1AQ7RTS3 328 aa19.34■□□□□ 0.69
ABCD4-204ENST00000466822 SYTL4Q96C24 671 aaPredicted RBP19.34■□□□□ 0.69
ABCD4-204ENST00000466822 DCAF5Q96JK2 942 aa19.33■□□□□ 0.68
ABCD4-204ENST00000466822 RGPD3A6NKT7 1758 aaPredicted RBP19.33■□□□□ 0.68
ABCD4-204ENST00000466822 RGPD4Q7Z3J3 1758 aa19.33■□□□□ 0.68
ABCD4-204ENST00000466822 NHSQ6T4R5 1651 aa19.33■□□□□ 0.68
ABCD4-204ENST00000466822 ERVV-2B6SEH9 535 aa19.32■□□□□ 0.68
ABCD4-204ENST00000466822 C1orf141Q5JVX7 400 aa19.32■□□□□ 0.68
ABCD4-204ENST00000466822 PROM2Q8N271 834 aa19.32■□□□□ 0.68
ABCD4-204ENST00000466822 SMARCC1Q92922 1105 aaPredicted RBP19.32■□□□□ 0.68
ABCD4-204ENST00000466822 AEBP1Q8IUX7 1158 aa19.31■□□□□ 0.68
ABCD4-204ENST00000466822 ZNF530Q6P9A1 599 aaPredicted RBP19.3■□□□□ 0.68
ABCD4-204ENST00000466822 PKD1L3Q7Z443 1732 aa19.3■□□□□ 0.68
ABCD4-204ENST00000466822 U2SURPO15042 1029 aaKnown RBP19.29■□□□□ 0.68
ABCD4-204ENST00000466822 AKAP4Q5JQC9 854 aa19.29■□□□□ 0.68
ABCD4-204ENST00000466822 KAT6BQ8WYB5 2073 aa19.28■□□□□ 0.68
ABCD4-204ENST00000466822 ZNF316A6NFI3 1004 aaPredicted RBP19.28■□□□□ 0.68
ABCD4-204ENST00000466822 COL3A1P02461 1466 aaPredicted RBP19.28■□□□□ 0.68
ABCD4-204ENST00000466822 FCHSD2O94868 740 aa19.27■□□□□ 0.68
ABCD4-204ENST00000466822 HMOX1P09601 288 aa19.27■□□□□ 0.68
ABCD4-204ENST00000466822 MPRIPQ6WCQ1 1025 aa19.27■□□□□ 0.68
ABCD4-204ENST00000466822 STK32BQ9NY57 414 aa19.27■□□□□ 0.68
ABCD4-204ENST00000466822 TMOD3Q9NYL9 352 aa19.27■□□□□ 0.68
ABCD4-204ENST00000466822 SHANK3Q9BYB0 1731 aa19.26■□□□□ 0.67
ABCD4-204ENST00000466822 R3HDM1Q15032 1099 aaKnown RBP19.26■□□□□ 0.67
ABCD4-204ENST00000466822 PNNQ9H307 717 aaKnown RBP19.26■□□□□ 0.67
ABCD4-204ENST00000466822 GAS2L2Q8NHY3 880 aa19.25■□□□□ 0.67
ABCD4-204ENST00000466822 PIGBQ92521 554 aa19.25■□□□□ 0.67
ABCD4-204ENST00000466822 RREB1Q92766 1687 aa19.24■□□□□ 0.67
ABCD4-204ENST00000466822 U2AF1L5P0DN76 240 aaPredicted RBP19.24■□□□□ 0.67
ABCD4-204ENST00000466822 U2AF1Q01081 240 aaKnown RBP eCLIP19.24■□□□□ 0.67
ABCD4-204ENST00000466822 SLC15A2Q16348 729 aa19.24■□□□□ 0.67
ABCD4-204ENST00000466822 MYBBP1AQ9BQG0 1328 aaKnown RBP19.23■□□□□ 0.67
ABCD4-204ENST00000466822 NEFMP07197 916 aa19.22■□□□□ 0.67
ABCD4-204ENST00000466822 CABP4P57796 275 aa19.22■□□□□ 0.67
ABCD4-204ENST00000466822 CCNL1Q9UK58 526 aaPredicted RBP19.22■□□□□ 0.67
ABCD4-204ENST00000466822 BTAF1O14981 1849 aa19.22■□□□□ 0.67
ABCD4-204ENST00000466822 PSDA5PKW4 1024 aaPredicted RBP19.21■□□□□ 0.67
ABCD4-204ENST00000466822 MTHFSDQ2M296 383 aaKnown RBP19.21■□□□□ 0.67
ABCD4-204ENST00000466822 PALLDQ8WX93 1383 aa19.2■□□□□ 0.66
ABCD4-204ENST00000466822 RSPH6AQ9H0K4 717 aa19.2■□□□□ 0.66
ABCD4-204ENST00000466822 LRRC4BQ9NT99 713 aa19.2■□□□□ 0.66
ABCD4-204ENST00000466822 DOT1LQ8TEK3 1739 aa19.2■□□□□ 0.66
ABCD4-204ENST00000466822 PRKRIP1Q9H875 184 aaPredicted RBP19.19■□□□□ 0.66
ABCD4-204ENST00000466822 NUP188Q5SRE5 1749 aa19.18■□□□□ 0.66
ABCD4-204ENST00000466822 GNAT3A8MTJ3 354 aa19.18■□□□□ 0.66
ABCD4-204ENST00000466822 PRKAR2BP31323 418 aa19.18■□□□□ 0.66
ABCD4-204ENST00000466822 RNMTO43148 476 aaKnown RBP19.17■□□□□ 0.66
ABCD4-204ENST00000466822 FLAD1Q8NFF5 587 aa19.17■□□□□ 0.66
ABCD4-204ENST00000466822 AKT1S1Q96B36 256 aa19.17■□□□□ 0.66
ABCD4-204ENST00000466822 ANO8Q9HCE9 1232 aaPredicted RBP19.17■□□□□ 0.66
ABCD4-204ENST00000466822 ATG3Q9NT62 314 aa19.17■□□□□ 0.66
ABCD4-204ENST00000466822 LOC102724428A0A0B4J2F2 783 aa19.16■□□□□ 0.66
ABCD4-204ENST00000466822 HTATSF1O43719 755 aaKnown RBP19.16■□□□□ 0.66
ABCD4-204ENST00000466822 SIK1P57059 783 aa19.16■□□□□ 0.66
ABCD4-204ENST00000466822 NFATC2IPQ8NCF5 419 aa19.16■□□□□ 0.66
ABCD4-204ENST00000466822 SLC16A10Q8TF71 515 aa19.16■□□□□ 0.66
ABCD4-204ENST00000466822 SLC52A2Q9HAB3 445 aa19.16■□□□□ 0.66
ABCD4-204ENST00000466822 KDM6AO15550 1401 aaPredicted RBP19.16■□□□□ 0.66
ABCD4-204ENST00000466822 SRCAPQ6ZRS2 3230 aa19.15■□□□□ 0.66
ABCD4-204ENST00000466822 ASAP1Q9ULH1 1129 aa19.15■□□□□ 0.66
ABCD4-204ENST00000466822 SPON1Q9HCB6 807 aa19.14■□□□□ 0.65
ABCD4-204ENST00000466822 MAP3K5Q99683 1374 aa19.14■□□□□ 0.65
ABCD4-204ENST00000466822 RTF1Q92541 710 aaKnown RBP19.13■□□□□ 0.65
ABCD4-204ENST00000466822 PHACTR3Q96KR7 559 aa19.13■□□□□ 0.65
ABCD4-204ENST00000466822 TFCP2L1Q9NZI6 479 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms