RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 USP31Q70CQ4 1352 aa19.21■□□□□ 0.67
ABCF3-206ENST00000466742 XPCQ01831 940 aaPredicted RBP19.2■□□□□ 0.66
ABCF3-206ENST00000466742 GOLGA2Q08379 1002 aa19.2■□□□□ 0.66
ABCF3-206ENST00000466742 IQSEC2Q5JU85 1478 aa19.2■□□□□ 0.66
ABCF3-206ENST00000466742 HSPA2P54652 639 aa19.2■□□□□ 0.66
ABCF3-206ENST00000466742 PROSER2Q86WR7 435 aaPredicted RBP19.2■□□□□ 0.66
ABCF3-206ENST00000466742 TNPO1Q92973 898 aaKnown RBP19.2■□□□□ 0.66
ABCF3-206ENST00000466742 CIZ1Q9ULV3 898 aaPredicted RBP19.2■□□□□ 0.66
ABCF3-206ENST00000466742 EMILIN1Q9Y6C2 1016 aa19.2■□□□□ 0.66
ABCF3-206ENST00000466742 PHF8Q9UPP1 1060 aa19.19■□□□□ 0.66
ABCF3-206ENST00000466742 LMTK3Q96Q04 1460 aa19.19■□□□□ 0.66
ABCF3-206ENST00000466742 U2SURPO15042 1029 aaKnown RBP19.18■□□□□ 0.66
ABCF3-206ENST00000466742 C14orf37Q86TY3 774 aa19.18■□□□□ 0.66
ABCF3-206ENST00000466742 TCP11L2Q8N4U5 519 aa19.18■□□□□ 0.66
ABCF3-206ENST00000466742 PDLIM2Q96JY6 352 aa19.18■□□□□ 0.66
ABCF3-206ENST00000466742 RGPD8O14715 1765 aaPredicted RBP19.18■□□□□ 0.66
ABCF3-206ENST00000466742 ZNF830Q96NB3 372 aaPredicted RBP19.18■□□□□ 0.66
ABCF3-206ENST00000466742 PHF23Q9BUL5 403 aaPredicted RBP19.17■□□□□ 0.66
ABCF3-206ENST00000466742 ZKSCAN5Q9Y2L8 839 aa19.17■□□□□ 0.66
ABCF3-206ENST00000466742 PLEKHF1Q96S99 279 aa19.17■□□□□ 0.66
ABCF3-206ENST00000466742 SLFN5Q08AF3 891 aa19.16■□□□□ 0.66
ABCF3-206ENST00000466742 CCDC27Q2M243 656 aa19.16■□□□□ 0.66
ABCF3-206ENST00000466742 TRMT2AQ8IZ69 625 aaKnown RBP19.16■□□□□ 0.66
ABCF3-206ENST00000466742 RRS1Q15050 365 aaKnown RBP19.16■□□□□ 0.66
ABCF3-206ENST00000466742 HSCBQ8IWL3 235 aa19.16■□□□□ 0.66
ABCF3-206ENST00000466742 C19orf44Q9H6X5 657 aa19.16■□□□□ 0.66
ABCF3-206ENST00000466742 RAB3GAP1Q15042 981 aa19.15■□□□□ 0.66
ABCF3-206ENST00000466742 WWC1Q8IX03 1113 aa19.15■□□□□ 0.66
ABCF3-206ENST00000466742 CLUAP1Q96AJ1 413 aa19.15■□□□□ 0.66
ABCF3-206ENST00000466742 C22orf23Q9BZE7 217 aa19.15■□□□□ 0.66
ABCF3-206ENST00000466742 IL13P35225 146 aa19.14■□□□□ 0.66
ABCF3-206ENST00000466742 PDE3AQ14432 1141 aa19.14■□□□□ 0.66
ABCF3-206ENST00000466742 FCHSD2O94868 740 aa19.14■□□□□ 0.65
ABCF3-206ENST00000466742 E9PSI1 815 aa19.13■□□□□ 0.65
ABCF3-206ENST00000466742 SMC5Q8IY18 1101 aa19.13■□□□□ 0.65
ABCF3-206ENST00000466742 MAP2P11137 1827 aaKnown RBP19.13■□□□□ 0.65
ABCF3-206ENST00000466742 ESCO1Q5FWF5 840 aa19.13■□□□□ 0.65
ABCF3-206ENST00000466742 MYRIPQ8NFW9 859 aa19.12■□□□□ 0.65
ABCF3-206ENST00000466742 TMEM94Q12767 1356 aa19.11■□□□□ 0.65
ABCF3-206ENST00000466742 ZNF445P59923 1031 aa19.11■□□□□ 0.65
ABCF3-206ENST00000466742 CBX1P83916 185 aa19.11■□□□□ 0.65
ABCF3-206ENST00000466742 WDR63Q8IWG1 891 aa19.11■□□□□ 0.65
ABCF3-206ENST00000466742 SNX21Q969T3 373 aa19.11■□□□□ 0.65
ABCF3-206ENST00000466742 PIK3C2AO00443 1686 aa19.11■□□□□ 0.65
ABCF3-206ENST00000466742 LRRC7Q96NW7 1537 aa19.11■□□□□ 0.65
ABCF3-206ENST00000466742 DCCP43146 1447 aa19.1■□□□□ 0.65
ABCF3-206ENST00000466742 KLHL40Q2TBA0 621 aa19.1■□□□□ 0.65
ABCF3-206ENST00000466742 RRP7AQ9Y3A4 280 aaKnown RBP19.1■□□□□ 0.65
ABCF3-206ENST00000466742 NLRP6P59044 892 aa19.09■□□□□ 0.65
ABCF3-206ENST00000466742 PAXIP1Q6ZW49 1069 aaPredicted RBP19.09■□□□□ 0.65
ABCF3-206ENST00000466742 SPINK5Q9NQ38 1064 aaPredicted RBP19.09■□□□□ 0.65
ABCF3-206ENST00000466742 RBM25P49756 843 aaKnown RBP19.09■□□□□ 0.65
ABCF3-206ENST00000466742 NEUROD2Q15784 382 aa19.09■□□□□ 0.65
ABCF3-206ENST00000466742 FTSJ3Q8IY81 847 aaKnown RBP19.09■□□□□ 0.65
ABCF3-206ENST00000466742 CLEC17AQ6ZS10 378 aa19.08■□□□□ 0.65
ABCF3-206ENST00000466742 DMRT2Q9Y5R5 561 aa19.08■□□□□ 0.65
ABCF3-206ENST00000466742 USP54Q70EL1 1684 aa19.08■□□□□ 0.65
ABCF3-206ENST00000466742 C1orf167Q5SNV9 1468 aa19.08■□□□□ 0.64
ABCF3-206ENST00000466742 BCAR3O75815 825 aa19.08■□□□□ 0.64
ABCF3-206ENST00000466742 TMPOP42166 694 aaKnown RBP19.08■□□□□ 0.64
ABCF3-206ENST00000466742 ZNF710Q8N1W2 664 aa19.08■□□□□ 0.64
ABCF3-206ENST00000466742 ABTB2Q8N961 1025 aa19.08■□□□□ 0.64
ABCF3-206ENST00000466742 VGLL3A8MV65 326 aa19.07■□□□□ 0.64
ABCF3-206ENST00000466742 HSP90AB1P08238 724 aaKnown RBP19.07■□□□□ 0.64
ABCF3-206ENST00000466742 GTF2F1P35269 517 aaKnown RBP eCLIP19.07■□□□□ 0.64
ABCF3-206ENST00000466742 PSME1Q06323 249 aa19.07■□□□□ 0.64
ABCF3-206ENST00000466742 ORAI2Q96SN7 254 aa19.07■□□□□ 0.64
ABCF3-206ENST00000466742 MAP3K19Q56UN5 1328 aa19.07■□□□□ 0.64
ABCF3-206ENST00000466742 ATP2B3Q16720 1220 aa19.07■□□□□ 0.64
ABCF3-206ENST00000466742 PDZRN3Q9UPQ7 1066 aa19.06■□□□□ 0.64
ABCF3-206ENST00000466742 STRCP1A6NGW2 1772 aa19.06■□□□□ 0.64
ABCF3-206ENST00000466742 SBNO1A3KN83 1393 aa19.06■□□□□ 0.64
ABCF3-206ENST00000466742 PRKAR2BP31323 418 aa19.06■□□□□ 0.64
ABCF3-206ENST00000466742 KIF24Q5T7B8 1368 aa19.05■□□□□ 0.64
ABCF3-206ENST00000466742 ATF3P18847 181 aa19.05■□□□□ 0.64
ABCF3-206ENST00000466742 EIF4A2Q14240 407 aaKnown RBP19.05■□□□□ 0.64
ABCF3-206ENST00000466742 PRIMPOLQ96LW4 560 aa19.05■□□□□ 0.64
ABCF3-206ENST00000466742 STRCQ7RTU9 1775 aa19.05■□□□□ 0.64
ABCF3-206ENST00000466742 FLT4P35916 1363 aa19.05■□□□□ 0.64
ABCF3-206ENST00000466742 CCDC39Q9UFE4 941 aa19.05■□□□□ 0.64
ABCF3-206ENST00000466742 GOLGA6L22H0YM25 854 aa19.04■□□□□ 0.64
ABCF3-206ENST00000466742 MST1RQ04912 1400 aa19.04■□□□□ 0.64
ABCF3-206ENST00000466742 HSP90AB2PQ58FF8 381 aa19.03■□□□□ 0.64
ABCF3-206ENST00000466742 PEAK1Q9H792 1746 aa19.03■□□□□ 0.64
ABCF3-206ENST00000466742 SOX12O15370 315 aa19.03■□□□□ 0.64
ABCF3-206ENST00000466742 HMOX1P09601 288 aa19.03■□□□□ 0.64
ABCF3-206ENST00000466742 CADPS2Q86UW7 1296 aa19.03■□□□□ 0.64
ABCF3-206ENST00000466742 PLCD3Q8N3E9 789 aa19.03■□□□□ 0.64
ABCF3-206ENST00000466742 TRIM35Q9UPQ4 493 aa19.03■□□□□ 0.64
ABCF3-206ENST00000466742 FOXO3O43524 673 aa19.02■□□□□ 0.64
ABCF3-206ENST00000466742 MFAP1P55081 439 aaKnown RBP19.02■□□□□ 0.64
ABCF3-206ENST00000466742 HMGN5P82970 282 aaKnown RBP19.02■□□□□ 0.64
ABCF3-206ENST00000466742 NUTM2GQ5VZR2 741 aa19.02■□□□□ 0.64
ABCF3-206ENST00000466742 DDX49Q9Y6V7 483 aaKnown RBP19.02■□□□□ 0.64
ABCF3-206ENST00000466742 RBSNQ9H1K0 784 aa19.01■□□□□ 0.63
ABCF3-206ENST00000466742 KIF1AQ12756 1690 aa19.01■□□□□ 0.63
ABCF3-206ENST00000466742 SLC20A2Q08357 652 aa19.01■□□□□ 0.63
ABCF3-206ENST00000466742 MARF1Q9Y4F3 1742 aaKnown RBP19.01■□□□□ 0.63
ABCF3-206ENST00000466742 MSH6P52701 1360 aa19■□□□□ 0.63
ABCF3-206ENST00000466742 CDK11BP21127 795 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms