RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 DOT1LQ8TEK3 1739 aa21.35■■□□□ 1.01
HMGXB4-206ENST00000466438 NSD2O96028 1365 aa21.35■■□□□ 1.01
HMGXB4-206ENST00000466438 PRIM1P49642 420 aaKnown RBP21.34■■□□□ 1.01
HMGXB4-206ENST00000466438 WDR90Q96KV7 1748 aa21.33■■□□□ 1.01
HMGXB4-206ENST00000466438 ANKRD24Q8TF21 1146 aa21.33■■□□□ 1.01
HMGXB4-206ENST00000466438 RAB3GAP2Q9H2M9 1393 aa21.33■■□□□ 1
HMGXB4-206ENST00000466438 IGSF1Q8N6C5 1336 aa21.32■■□□□ 1
HMGXB4-206ENST00000466438 TNS4Q8IZW8 715 aa21.32■■□□□ 1
HMGXB4-206ENST00000466438 EVC2Q86UK5 1308 aa21.31■■□□□ 1
HMGXB4-206ENST00000466438 LTN1O94822 1766 aa21.31■■□□□ 1
HMGXB4-206ENST00000466438 CICQ96RK0 1608 aaPredicted RBP21.31■■□□□ 1
HMGXB4-206ENST00000466438 JMYQ8N9B5 988 aa21.31■■□□□ 1
HMGXB4-206ENST00000466438 KLRG1Q96E93 195 aa21.3■■□□□ 1
HMGXB4-206ENST00000466438 USP54Q70EL1 1684 aa21.3■■□□□ 1
HMGXB4-206ENST00000466438 USP31Q70CQ4 1352 aa21.29■■□□□ 1
HMGXB4-206ENST00000466438 FLAD1Q8NFF5 587 aa21.29■■□□□ 1
HMGXB4-206ENST00000466438 KTN1Q86UP2 1357 aaKnown RBP21.28■■□□□ 1
HMGXB4-206ENST00000466438 WWC3Q9ULE0 1092 aa21.28■■□□□ 1
HMGXB4-206ENST00000466438 C5P01031 1676 aa21.28■■□□□ 1
HMGXB4-206ENST00000466438 USP47Q96K76 1375 aa21.27■■□□□ 1
HMGXB4-206ENST00000466438 MON2Q7Z3U7 1717 aa21.26■□□□□ 0.99
HMGXB4-206ENST00000466438 FAM208AQ9UK61 1670 aaKnown RBP21.25■□□□□ 0.99
HMGXB4-206ENST00000466438 HMGB2P26583 209 aaKnown RBP21.24■□□□□ 0.99
HMGXB4-206ENST00000466438 RBM46Q8TBY0 533 aaKnown RBP21.23■□□□□ 0.99
HMGXB4-206ENST00000466438 HTRA3P83110 453 aa21.22■□□□□ 0.99
HMGXB4-206ENST00000466438 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.21■□□□□ 0.99
HMGXB4-206ENST00000466438 NMRK2Q9NPI5 230 aa21.21■□□□□ 0.99
HMGXB4-206ENST00000466438 TAF1LQ8IZX4 1826 aa21.2■□□□□ 0.98
HMGXB4-206ENST00000466438 PCNTO95613 3336 aa21.19■□□□□ 0.98
HMGXB4-206ENST00000466438 NME9Q86XW9 330 aa21.19■□□□□ 0.98
HMGXB4-206ENST00000466438 FSTL1Q12841 308 aa21.18■□□□□ 0.98
HMGXB4-206ENST00000466438 ZCRB1Q8TBF4 217 aaKnown RBP21.18■□□□□ 0.98
HMGXB4-206ENST00000466438 C4BP0C0L5 1744 aa21.16■□□□□ 0.98
HMGXB4-206ENST00000466438 TOGARAM1Q9Y4F4 1720 aa21.16■□□□□ 0.98
HMGXB4-206ENST00000466438 SBNO2Q9Y2G9 1366 aa21.16■□□□□ 0.98
HMGXB4-206ENST00000466438 C16orf71Q8IYS4 520 aaPredicted RBP21.16■□□□□ 0.98
HMGXB4-206ENST00000466438 IP6K1Q92551 441 aa21.16■□□□□ 0.98
HMGXB4-206ENST00000466438 NSD3Q9BZ95 1437 aa21.15■□□□□ 0.98
HMGXB4-206ENST00000466438 SLC34A2O95436 690 aa21.15■□□□□ 0.98
HMGXB4-206ENST00000466438 LTV1Q96GA3 475 aaPredicted RBP21.15■□□□□ 0.98
HMGXB4-206ENST00000466438 AK7Q96M32 723 aa21.15■□□□□ 0.98
HMGXB4-206ENST00000466438 MEGF6O75095 1541 aa21.14■□□□□ 0.98
HMGXB4-206ENST00000466438 PALLDQ8WX93 1383 aa21.14■□□□□ 0.98
HMGXB4-206ENST00000466438 AMIGO3Q86WK7 504 aa21.13■□□□□ 0.97
HMGXB4-206ENST00000466438 UBR3Q6ZT12 1888 aa21.13■□□□□ 0.97
HMGXB4-206ENST00000466438 PXDNLA1KZ92 1463 aa21.13■□□□□ 0.97
HMGXB4-206ENST00000466438 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.11■□□□□ 0.97
HMGXB4-206ENST00000466438 PHF14O94880 888 aa21.11■□□□□ 0.97
HMGXB4-206ENST00000466438 CD163L1Q9NR16 1453 aa21.11■□□□□ 0.97
HMGXB4-206ENST00000466438 PLEKHG2Q9H7P9 1386 aa21.1■□□□□ 0.97
HMGXB4-206ENST00000466438 KIF13BQ9NQT8 1826 aa21.1■□□□□ 0.97
HMGXB4-206ENST00000466438 KIAA1551Q9HCM1 1747 aa21.09■□□□□ 0.97
HMGXB4-206ENST00000466438 SSFA2P28290 1259 aa21.09■□□□□ 0.97
HMGXB4-206ENST00000466438 BCS1LQ9Y276 419 aa21.09■□□□□ 0.97
HMGXB4-206ENST00000466438 EDC4Q6P2E9 1401 aaKnown RBP21.08■□□□□ 0.97
HMGXB4-206ENST00000466438 ARHGAP27Q6ZUM4 889 aa21.08■□□□□ 0.97
HMGXB4-206ENST00000466438 C10orf71Q711Q0 1435 aa21.08■□□□□ 0.97
HMGXB4-206ENST00000466438 CGNL1Q0VF96 1302 aa21.07■□□□□ 0.96
HMGXB4-206ENST00000466438 HSPA1AP0DMV8 641 aaKnown RBP21.07■□□□□ 0.96
HMGXB4-206ENST00000466438 HSPA1BP0DMV9 641 aaKnown RBP21.07■□□□□ 0.96
HMGXB4-206ENST00000466438 TGFB2P61812 414 aa21.07■□□□□ 0.96
HMGXB4-206ENST00000466438 RGPD2P0DJD1 1756 aa21.07■□□□□ 0.96
HMGXB4-206ENST00000466438 N4BP2Q86UW6 1770 aaPredicted RBP21.06■□□□□ 0.96
HMGXB4-206ENST00000466438 SMIM5Q71RC9 77 aa21.06■□□□□ 0.96
HMGXB4-206ENST00000466438 SMARCC1Q92922 1105 aaPredicted RBP21.05■□□□□ 0.96
HMGXB4-206ENST00000466438 KDM2BQ8NHM5 1336 aa21.04■□□□□ 0.96
HMGXB4-206ENST00000466438 HOXC9P31274 260 aa21.04■□□□□ 0.96
HMGXB4-206ENST00000466438 C9orf131Q5VYM1 1079 aa21.04■□□□□ 0.96
HMGXB4-206ENST00000466438 MPRIPQ6WCQ1 1025 aa21.04■□□□□ 0.96
HMGXB4-206ENST00000466438 HDGFL2Q7Z4V5 671 aaPredicted RBP21.04■□□□□ 0.96
HMGXB4-206ENST00000466438 PKD1L3Q7Z443 1732 aa21.04■□□□□ 0.96
HMGXB4-206ENST00000466438 KCPQ6ZWJ8 1503 aa21.04■□□□□ 0.96
HMGXB4-206ENST00000466438 MMP10P09238 476 aa21.03■□□□□ 0.96
HMGXB4-206ENST00000466438 MAP3K19Q56UN5 1328 aa21.03■□□□□ 0.96
HMGXB4-206ENST00000466438 A0A0G2JLW4 131 aa21.02■□□□□ 0.96
HMGXB4-206ENST00000466438 SMC1BQ8NDV3 1235 aa21.02■□□□□ 0.96
HMGXB4-206ENST00000466438 TNRC6CQ9HCJ0 1690 aaKnown RBP21.02■□□□□ 0.95
HMGXB4-206ENST00000466438 PCDH11XQ9BZA7 1347 aa21.02■□□□□ 0.95
HMGXB4-206ENST00000466438 PCDH11YQ9BZA8 1340 aa21.02■□□□□ 0.95
HMGXB4-206ENST00000466438 FCHSD2O94868 740 aa21.01■□□□□ 0.95
HMGXB4-206ENST00000466438 RAPGEF4Q8WZA2 1011 aa21.01■□□□□ 0.95
HMGXB4-206ENST00000466438 AMPHP49418 695 aa21■□□□□ 0.95
HMGXB4-206ENST00000466438 BRCA1P38398 1863 aaKnown RBP21■□□□□ 0.95
HMGXB4-206ENST00000466438 TMC1Q8TDI8 760 aa20.99■□□□□ 0.95
HMGXB4-206ENST00000466438 RRAGCQ9HB90 399 aa20.99■□□□□ 0.95
HMGXB4-206ENST00000466438 ROCK2O75116 1388 aaKnown RBP20.98■□□□□ 0.95
HMGXB4-206ENST00000466438 NBPF6Q5VWK0 638 aa20.98■□□□□ 0.95
HMGXB4-206ENST00000466438 LINC00116Q8NCU8 138 aa20.98■□□□□ 0.95
HMGXB4-206ENST00000466438 NBPF4Q96M43 638 aa20.98■□□□□ 0.95
HMGXB4-206ENST00000466438 MAP2P11137 1827 aaKnown RBP20.98■□□□□ 0.95
HMGXB4-206ENST00000466438 ITGB4P16144 1822 aa20.98■□□□□ 0.95
HMGXB4-206ENST00000466438 A0A1W2PP64 1363 aa20.97■□□□□ 0.95
HMGXB4-206ENST00000466438 ARFGEF1Q9Y6D6 1849 aa20.97■□□□□ 0.95
HMGXB4-206ENST00000466438 GNPATO15228 680 aa20.97■□□□□ 0.95
HMGXB4-206ENST00000466438 DPEP1P16444 411 aa20.97■□□□□ 0.95
HMGXB4-206ENST00000466438 TATP17735 454 aaPredicted RBP20.97■□□□□ 0.95
HMGXB4-206ENST00000466438 SLC12A5Q9H2X9 1139 aa20.97■□□□□ 0.95
HMGXB4-206ENST00000466438 TERF2IPQ9NYB0 399 aa20.97■□□□□ 0.95
HMGXB4-206ENST00000466438 RTL1A6NKG5 1358 aa20.97■□□□□ 0.95
HMGXB4-206ENST00000466438 USHBP1Q8N6Y0 703 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms