RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 LTV1Q96GA3 475 aaPredicted RBP21.65■■□□□ 1.06
HDAC6-214ENST00000465269 LY75O60449 1722 aa21.65■■□□□ 1.06
HDAC6-214ENST00000465269 CAPN15O75808 1086 aa21.64■■□□□ 1.05
HDAC6-214ENST00000465269 PCNTO95613 3336 aa21.63■■□□□ 1.05
HDAC6-214ENST00000465269 ANKRD36BQ8N2N9 1353 aa21.61■■□□□ 1.05
HDAC6-214ENST00000465269 SMIM5Q71RC9 77 aa21.61■■□□□ 1.05
HDAC6-214ENST00000465269 DNAJC5GQ8N7S2 189 aa21.61■■□□□ 1.05
HDAC6-214ENST00000465269 CD2APQ9Y5K6 639 aa21.61■■□□□ 1.05
HDAC6-214ENST00000465269 USP31Q70CQ4 1352 aa21.59■■□□□ 1.05
HDAC6-214ENST00000465269 IGSF1Q8N6C5 1336 aa21.58■■□□□ 1.05
HDAC6-214ENST00000465269 MON2Q7Z3U7 1717 aa21.58■■□□□ 1.05
HDAC6-214ENST00000465269 COL13A1Q5TAT6 717 aaPredicted RBP21.58■■□□□ 1.05
HDAC6-214ENST00000465269 AMIGO3Q86WK7 504 aa21.58■■□□□ 1.05
HDAC6-214ENST00000465269 HTRA3P83110 453 aa21.57■■□□□ 1.04
HDAC6-214ENST00000465269 APLP1P51693 650 aa21.56■■□□□ 1.04
HDAC6-214ENST00000465269 SBNO2Q9Y2G9 1366 aa21.55■■□□□ 1.04
HDAC6-214ENST00000465269 USP54Q70EL1 1684 aa21.53■■□□□ 1.04
HDAC6-214ENST00000465269 CD163L1Q9NR16 1453 aa21.53■■□□□ 1.04
HDAC6-214ENST00000465269 USP47Q96K76 1375 aa21.53■■□□□ 1.04
HDAC6-214ENST00000465269 MEGF6O75095 1541 aa21.53■■□□□ 1.04
HDAC6-214ENST00000465269 C5P01031 1676 aa21.53■■□□□ 1.04
HDAC6-214ENST00000465269 RGPD2P0DJD1 1756 aa21.51■■□□□ 1.03
HDAC6-214ENST00000465269 FBLN1P23142 703 aa21.51■■□□□ 1.03
HDAC6-214ENST00000465269 ZCRB1Q8TBF4 217 aaKnown RBP21.51■■□□□ 1.03
HDAC6-214ENST00000465269 IP6K1Q92551 441 aa21.51■■□□□ 1.03
HDAC6-214ENST00000465269 FAM208AQ9UK61 1670 aaKnown RBP21.5■■□□□ 1.03
HDAC6-214ENST00000465269 PHF14O94880 888 aa21.5■■□□□ 1.03
HDAC6-214ENST00000465269 NMRK2Q9NPI5 230 aa21.49■■□□□ 1.03
HDAC6-214ENST00000465269 TMC1Q8TDI8 760 aa21.48■■□□□ 1.03
HDAC6-214ENST00000465269 TOGARAM1Q9Y4F4 1720 aa21.47■■□□□ 1.03
HDAC6-214ENST00000465269 USHBP1Q8N6Y0 703 aa21.47■■□□□ 1.03
HDAC6-214ENST00000465269 TOMM70O94826 608 aa21.46■■□□□ 1.03
HDAC6-214ENST00000465269 L3MBTL2Q969R5 705 aa21.46■■□□□ 1.03
HDAC6-214ENST00000465269 SLC12A5Q9H2X9 1139 aa21.46■■□□□ 1.03
HDAC6-214ENST00000465269 TAF1LQ8IZX4 1826 aa21.45■■□□□ 1.03
HDAC6-214ENST00000465269 WDR90Q96KV7 1748 aa21.45■■□□□ 1.02
HDAC6-214ENST00000465269 PALLDQ8WX93 1383 aa21.44■■□□□ 1.02
HDAC6-214ENST00000465269 MAP3K19Q56UN5 1328 aa21.43■■□□□ 1.02
HDAC6-214ENST00000465269 ROCK2O75116 1388 aaKnown RBP21.43■■□□□ 1.02
HDAC6-214ENST00000465269 C4BP0C0L5 1744 aa21.43■■□□□ 1.02
HDAC6-214ENST00000465269 HOXC9P31274 260 aa21.42■■□□□ 1.02
HDAC6-214ENST00000465269 MPRIPQ6WCQ1 1025 aa21.42■■□□□ 1.02
HDAC6-214ENST00000465269 TNS4Q8IZW8 715 aa21.42■■□□□ 1.02
HDAC6-214ENST00000465269 FLAD1Q8NFF5 587 aa21.42■■□□□ 1.02
HDAC6-214ENST00000465269 AK7Q96M32 723 aa21.42■■□□□ 1.02
HDAC6-214ENST00000465269 CICQ96RK0 1608 aaPredicted RBP21.42■■□□□ 1.02
HDAC6-214ENST00000465269 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.41■■□□□ 1.02
HDAC6-214ENST00000465269 KLRG1Q96E93 195 aa21.41■■□□□ 1.02
HDAC6-214ENST00000465269 EDC4Q6P2E9 1401 aaKnown RBP21.4■■□□□ 1.02
HDAC6-214ENST00000465269 A0A1W2PP64 1363 aa21.4■■□□□ 1.02
HDAC6-214ENST00000465269 NBPF6Q5VWK0 638 aa21.4■■□□□ 1.02
HDAC6-214ENST00000465269 HDGFL2Q7Z4V5 671 aaPredicted RBP21.4■■□□□ 1.02
HDAC6-214ENST00000465269 NBPF4Q96M43 638 aa21.4■■□□□ 1.02
HDAC6-214ENST00000465269 UBR3Q6ZT12 1888 aa21.4■■□□□ 1.02
HDAC6-214ENST00000465269 AMPHP49418 695 aa21.39■■□□□ 1.01
HDAC6-214ENST00000465269 BCS1LQ9Y276 419 aa21.38■■□□□ 1.01
HDAC6-214ENST00000465269 PXDNLA1KZ92 1463 aa21.38■■□□□ 1.01
HDAC6-214ENST00000465269 A0A0G2JLW4 131 aa21.37■■□□□ 1.01
HDAC6-214ENST00000465269 PRELPP51888 382 aa21.37■■□□□ 1.01
HDAC6-214ENST00000465269 ARHGAP27Q6ZUM4 889 aa21.37■■□□□ 1.01
HDAC6-214ENST00000465269 JMYQ8N9B5 988 aa21.37■■□□□ 1.01
HDAC6-214ENST00000465269 N4BP2Q86UW6 1770 aaPredicted RBP21.37■■□□□ 1.01
HDAC6-214ENST00000465269 KIAA1551Q9HCM1 1747 aa21.35■■□□□ 1.01
HDAC6-214ENST00000465269 LINC00116Q8NCU8 138 aa21.35■■□□□ 1.01
HDAC6-214ENST00000465269 MMP10P09238 476 aa21.34■■□□□ 1.01
HDAC6-214ENST00000465269 RRS1Q15050 365 aaKnown RBP21.34■■□□□ 1.01
HDAC6-214ENST00000465269 RBM46Q8TBY0 533 aaKnown RBP21.33■■□□□ 1.01
HDAC6-214ENST00000465269 RAPGEF4Q8WZA2 1011 aa21.33■■□□□ 1.01
HDAC6-214ENST00000465269 SIN3AQ96ST3 1273 aa21.33■■□□□ 1.01
HDAC6-214ENST00000465269 CYP27B1O15528 508 aa21.32■■□□□ 1
HDAC6-214ENST00000465269 PIGBQ92521 554 aa21.31■■□□□ 1
HDAC6-214ENST00000465269 TERF2IPQ9NYB0 399 aa21.31■■□□□ 1
HDAC6-214ENST00000465269 ITGB4P16144 1822 aa21.31■■□□□ 1
HDAC6-214ENST00000465269 GNPATO15228 680 aa21.3■■□□□ 1
HDAC6-214ENST00000465269 TATP17735 454 aaPredicted RBP21.3■■□□□ 1
HDAC6-214ENST00000465269 SSFA2P28290 1259 aa21.3■■□□□ 1
HDAC6-214ENST00000465269 C9orf131Q5VYM1 1079 aa21.3■■□□□ 1
HDAC6-214ENST00000465269 C16orf71Q8IYS4 520 aaPredicted RBP21.3■■□□□ 1
HDAC6-214ENST00000465269 COG3Q96JB2 828 aa21.3■■□□□ 1
HDAC6-214ENST00000465269 DPEP1P16444 411 aa21.29■■□□□ 1
HDAC6-214ENST00000465269 ITPK1Q13572 414 aa21.29■■□□□ 1
HDAC6-214ENST00000465269 KCPQ6ZWJ8 1503 aa21.29■■□□□ 1
HDAC6-214ENST00000465269 PCDH11XQ9BZA7 1347 aa21.29■■□□□ 1
HDAC6-214ENST00000465269 PCDH11YQ9BZA8 1340 aa21.29■■□□□ 1
HDAC6-214ENST00000465269 FCHSD2O94868 740 aa21.28■■□□□ 1
HDAC6-214ENST00000465269 MAP2P11137 1827 aaKnown RBP21.27■■□□□ 1
HDAC6-214ENST00000465269 SMARCC1Q92922 1105 aaPredicted RBP21.27■■□□□ 1
HDAC6-214ENST00000465269 KIF13BQ9NQT8 1826 aa21.27■□□□□ 0.99
HDAC6-214ENST00000465269 LOC102724428A0A0B4J2F2 783 aa21.26■□□□□ 0.99
HDAC6-214ENST00000465269 SIK1P57059 783 aa21.26■□□□□ 0.99
HDAC6-214ENST00000465269 NEUROD1Q13562 356 aa21.26■□□□□ 0.99
HDAC6-214ENST00000465269 RRAGCQ9HB90 399 aa21.26■□□□□ 0.99
HDAC6-214ENST00000465269 CGNL1Q0VF96 1302 aa21.26■□□□□ 0.99
HDAC6-214ENST00000465269 C10orf71Q711Q0 1435 aa21.25■□□□□ 0.99
HDAC6-214ENST00000465269 NSD3Q9BZ95 1437 aa21.25■□□□□ 0.99
HDAC6-214ENST00000465269 FSTL1Q12841 308 aa21.24■□□□□ 0.99
HDAC6-214ENST00000465269 HSP90AB2PQ58FF8 381 aa21.24■□□□□ 0.99
HDAC6-214ENST00000465269 ASAP1Q9ULH1 1129 aa21.24■□□□□ 0.99
HDAC6-214ENST00000465269 HSPA1AP0DMV8 641 aaKnown RBP21.23■□□□□ 0.99
HDAC6-214ENST00000465269 HSPA1BP0DMV9 641 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms