RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 PLEKHG5O94827 1062 aa14.23□□□□□ -0.13
TNRC6A-205ENST00000464539 TNNT2P45379 298 aaPredicted RBP14.23□□□□□ -0.13
TNRC6A-205ENST00000464539 NUCB1Q02818 461 aa14.23□□□□□ -0.13
TNRC6A-205ENST00000464539 GJD4Q96KN9 370 aaPredicted RBP14.23□□□□□ -0.13
TNRC6A-205ENST00000464539 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.23□□□□□ -0.13
TNRC6A-205ENST00000464539 METP08581 1390 aa14.23□□□□□ -0.13
TNRC6A-205ENST00000464539 BCL9LQ86UU0 1499 aa14.23□□□□□ -0.13
TNRC6A-205ENST00000464539 SF3B2Q13435 895 aaKnown RBP14.23□□□□□ -0.13
TNRC6A-205ENST00000464539 TCP11L2Q8N4U5 519 aa14.23□□□□□ -0.13
TNRC6A-205ENST00000464539 KIF2CQ99661 725 aa14.23□□□□□ -0.13
TNRC6A-205ENST00000464539 MYOM2P54296 1465 aa14.22□□□□□ -0.13
TNRC6A-205ENST00000464539 GTPBP4Q9BZE4 634 aaKnown RBP14.22□□□□□ -0.13
TNRC6A-205ENST00000464539 TNNQ9UQP3 1299 aa14.22□□□□□ -0.13
TNRC6A-205ENST00000464539 SSFA2P28290 1259 aa14.21□□□□□ -0.14
TNRC6A-205ENST00000464539 ZSCAN23Q3MJ62 389 aa14.21□□□□□ -0.14
TNRC6A-205ENST00000464539 KIF20AO95235 890 aa14.2□□□□□ -0.14
TNRC6A-205ENST00000464539 CWC22Q9HCG8 908 aaKnown RBP14.2□□□□□ -0.14
TNRC6A-205ENST00000464539 XPCQ01831 940 aaPredicted RBP14.19□□□□□ -0.14
TNRC6A-205ENST00000464539 DEFB132Q7Z7B7 95 aa14.19□□□□□ -0.14
TNRC6A-205ENST00000464539 ORAI2Q96SN7 254 aa14.19□□□□□ -0.14
TNRC6A-205ENST00000464539 RBSNQ9H1K0 784 aa14.19□□□□□ -0.14
TNRC6A-205ENST00000464539 FGD1P98174 961 aa14.18□□□□□ -0.14
TNRC6A-205ENST00000464539 PRIMPOLQ96LW4 560 aa14.18□□□□□ -0.14
TNRC6A-205ENST00000464539 CHMP4BQ9H444 224 aaKnown RBP14.18□□□□□ -0.14
TNRC6A-205ENST00000464539 LMBRD1Q9NUN5 540 aa14.18□□□□□ -0.14
TNRC6A-205ENST00000464539 SPHKAPQ2M3C7 1700 aa14.18□□□□□ -0.14
TNRC6A-205ENST00000464539 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.18□□□□□ -0.14
TNRC6A-205ENST00000464539 KIAA1210Q9ULL0 1709 aa14.18□□□□□ -0.14
TNRC6A-205ENST00000464539 HMGN5P82970 282 aaKnown RBP14.18□□□□□ -0.14
TNRC6A-205ENST00000464539 CHD1LQ86WJ1 897 aa14.18□□□□□ -0.14
TNRC6A-205ENST00000464539 MYRIPQ8NFW9 859 aa14.18□□□□□ -0.14
TNRC6A-205ENST00000464539 ZBTB40Q9NUA8 1239 aa14.18□□□□□ -0.14
TNRC6A-205ENST00000464539 EP400Q96L91 3159 aa14.18□□□□□ -0.14
TNRC6A-205ENST00000464539 CYP2E1P05181 493 aaPredicted RBP14.17□□□□□ -0.14
TNRC6A-205ENST00000464539 ATF7IPQ6VMQ6 1270 aa14.17□□□□□ -0.14
TNRC6A-205ENST00000464539 BCL2L13Q9BXK5 485 aa14.17□□□□□ -0.14
TNRC6A-205ENST00000464539 CARD14Q9BXL6 1004 aa14.17□□□□□ -0.14
TNRC6A-205ENST00000464539 MARF1Q9Y4F3 1742 aaKnown RBP14.17□□□□□ -0.14
TNRC6A-205ENST00000464539 NPHP3Q7Z494 1330 aa14.17□□□□□ -0.14
TNRC6A-205ENST00000464539 IPO8O15397 1037 aaKnown RBP14.16□□□□□ -0.14
TNRC6A-205ENST00000464539 RABEP1Q15276 862 aa14.16□□□□□ -0.14
TNRC6A-205ENST00000464539 LRSAM1Q6UWE0 723 aa14.16□□□□□ -0.14
TNRC6A-205ENST00000464539 GAS2L2Q8NHY3 880 aa14.16□□□□□ -0.14
TNRC6A-205ENST00000464539 CFAP53Q96M91 514 aa14.16□□□□□ -0.14
TNRC6A-205ENST00000464539 TRIM27P14373 513 aa14.16□□□□□ -0.14
TNRC6A-205ENST00000464539 ZSCAN20P17040 1043 aaPredicted RBP14.16□□□□□ -0.14
TNRC6A-205ENST00000464539 GTF2F1P35269 517 aaKnown RBP eCLIP14.16□□□□□ -0.14
TNRC6A-205ENST00000464539 CAVIN1Q6NZI2 390 aaKnown RBP14.16□□□□□ -0.14
TNRC6A-205ENST00000464539 GCC1Q96CN9 775 aa14.16□□□□□ -0.14
TNRC6A-205ENST00000464539 GLI3P10071 1580 aa14.15□□□□□ -0.14
TNRC6A-205ENST00000464539 LETM1O95202 739 aaPredicted RBP14.15□□□□□ -0.14
TNRC6A-205ENST00000464539 NEUROD2Q15784 382 aa14.15□□□□□ -0.14
TNRC6A-205ENST00000464539 MCTP1Q6DN14 999 aa14.15□□□□□ -0.14
TNRC6A-205ENST00000464539 UNC5CLQ8IV45 518 aa14.15□□□□□ -0.14
TNRC6A-205ENST00000464539 PRIM1P49642 420 aaKnown RBP14.14□□□□□ -0.15
TNRC6A-205ENST00000464539 MORC1Q86VD1 984 aa14.14□□□□□ -0.15
TNRC6A-205ENST00000464539 ITPRIPQ8IWB1 547 aa14.14□□□□□ -0.15
TNRC6A-205ENST00000464539 SMC4Q9NTJ3 1288 aa14.14□□□□□ -0.15
TNRC6A-205ENST00000464539 IL16Q14005 1332 aa14.14□□□□□ -0.15
TNRC6A-205ENST00000464539 KIAA2012Q0VF49 1180 aa14.14□□□□□ -0.15
TNRC6A-205ENST00000464539 RRP7AQ9Y3A4 280 aaKnown RBP14.14□□□□□ -0.15
TNRC6A-205ENST00000464539 SBNO2Q9Y2G9 1366 aa14.14□□□□□ -0.15
TNRC6A-205ENST00000464539 PXDNQ92626 1479 aa14.13□□□□□ -0.15
TNRC6A-205ENST00000464539 CD2BP2O95400 341 aaKnown RBP14.13□□□□□ -0.15
TNRC6A-205ENST00000464539 TAF3Q5VWG9 929 aa14.13□□□□□ -0.15
TNRC6A-205ENST00000464539 SLIT2O94813 1529 aa14.13□□□□□ -0.15
TNRC6A-205ENST00000464539 PSDA5PKW4 1024 aaPredicted RBP14.12□□□□□ -0.15
TNRC6A-205ENST00000464539 MBD3O95983 291 aa14.12□□□□□ -0.15
TNRC6A-205ENST00000464539 BAG6P46379 1132 aa14.12□□□□□ -0.15
TNRC6A-205ENST00000464539 FOXD4L1Q9NU39 408 aa14.12□□□□□ -0.15
TNRC6A-205ENST00000464539 ROBO2Q9HCK4 1378 aa14.11□□□□□ -0.15
TNRC6A-205ENST00000464539 A0A0U1RQG5 324 aaPredicted RBP14.11□□□□□ -0.15
TNRC6A-205ENST00000464539 TBC1D9Q6ZT07 1266 aa14.11□□□□□ -0.15
TNRC6A-205ENST00000464539 ABCC11Q96J66 1382 aa14.11□□□□□ -0.15
TNRC6A-205ENST00000464539 CDC45O75419 566 aa14.1□□□□□ -0.15
TNRC6A-205ENST00000464539 ALDH1L2Q3SY69 923 aa14.1□□□□□ -0.15
TNRC6A-205ENST00000464539 SEPT12Q8IYM1 358 aa14.1□□□□□ -0.15
TNRC6A-205ENST00000464539 LNPKQ9C0E8 428 aa14.1□□□□□ -0.15
TNRC6A-205ENST00000464539 BRWD3Q6RI45 1802 aa14.1□□□□□ -0.15
TNRC6A-205ENST00000464539 NEXMIFQ5QGS0 1516 aa14.1□□□□□ -0.15
TNRC6A-205ENST00000464539 BRPF1P55201 1214 aaPredicted RBP14.1□□□□□ -0.15
TNRC6A-205ENST00000464539 ESCO1Q5FWF5 840 aa14.1□□□□□ -0.15
TNRC6A-205ENST00000464539 TMEM57Q8N5G2 664 aa14.1□□□□□ -0.15
TNRC6A-205ENST00000464539 SSH1Q8WYL5 1049 aa14.1□□□□□ -0.15
TNRC6A-205ENST00000464539 ZNF428Q96B54 188 aa14.1□□□□□ -0.15
TNRC6A-205ENST00000464539 ADGRB2O60241 1585 aa14.09□□□□□ -0.15
TNRC6A-205ENST00000464539 UVSSAQ2YD98 709 aa14.09□□□□□ -0.15
TNRC6A-205ENST00000464539 KLHL34Q8N239 644 aa14.09□□□□□ -0.15
TNRC6A-205ENST00000464539 ZHX1Q9UKY1 873 aaPredicted RBP14.09□□□□□ -0.15
TNRC6A-205ENST00000464539 NOB1Q9ULX3 412 aaKnown RBP14.09□□□□□ -0.15
TNRC6A-205ENST00000464539 EXOSC9Q06265 439 aaKnown RBP14.08□□□□□ -0.16
TNRC6A-205ENST00000464539 KRT27Q7Z3Y8 459 aa14.08□□□□□ -0.16
TNRC6A-205ENST00000464539 CDC42BPGQ6DT37 1551 aa14.08□□□□□ -0.16
TNRC6A-205ENST00000464539 PRPF40AO75400 957 aaKnown RBP14.08□□□□□ -0.16
TNRC6A-205ENST00000464539 CLTCL1P53675 1640 aa14.07□□□□□ -0.16
TNRC6A-205ENST00000464539 USP32Q8NFA0 1604 aa14.07□□□□□ -0.16
TNRC6A-205ENST00000464539 FOXO3O43524 673 aa14.07□□□□□ -0.16
TNRC6A-205ENST00000464539 PTMAP06454 111 aaKnown RBP14.07□□□□□ -0.16
TNRC6A-205ENST00000464539 VPS72Q15906 364 aa14.07□□□□□ -0.16
TNRC6A-205ENST00000464539 GPT2Q8TD30 523 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms