RNA–Protein interactions for RNA: ENST00000463285.5

CTPS1-203, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 739 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-203ENST00000463285 ANKRD24Q8TF21 1146 aa12.56□□□□□ -0.4
CTPS1-203ENST00000463285 LRRC4BQ9NT99 713 aa12.56□□□□□ -0.4
CTPS1-203ENST00000463285 MON2Q7Z3U7 1717 aa12.55□□□□□ -0.4
CTPS1-203ENST00000463285 POLD1P28340 1107 aa12.55□□□□□ -0.4
CTPS1-203ENST00000463285 LTN1O94822 1766 aa12.54□□□□□ -0.4
CTPS1-203ENST00000463285 GIGYF1O75420 1035 aaPredicted RBP12.54□□□□□ -0.4
CTPS1-203ENST00000463285 DDX54Q8TDD1 881 aaKnown RBP12.54□□□□□ -0.4
CTPS1-203ENST00000463285 USP31Q70CQ4 1352 aa12.54□□□□□ -0.4
CTPS1-203ENST00000463285 KAT6BQ8WYB5 2073 aa12.53□□□□□ -0.4
CTPS1-203ENST00000463285 TMC1Q8TDI8 760 aa12.53□□□□□ -0.4
CTPS1-203ENST00000463285 SLC16A10Q8TF71 515 aa12.53□□□□□ -0.4
CTPS1-203ENST00000463285 SLC27A3Q5K4L6 730 aa12.52□□□□□ -0.41
CTPS1-203ENST00000463285 SYTL4Q96C24 671 aaPredicted RBP12.52□□□□□ -0.41
CTPS1-203ENST00000463285 LTV1Q96GA3 475 aaPredicted RBP12.52□□□□□ -0.41
CTPS1-203ENST00000463285 TFCP2L1Q9NZI6 479 aa12.52□□□□□ -0.41
CTPS1-203ENST00000463285 PNPLA7Q6ZV29 1317 aa12.52□□□□□ -0.41
CTPS1-203ENST00000463285 USP54Q70EL1 1684 aa12.51□□□□□ -0.41
CTPS1-203ENST00000463285 KCNQ4P56696 695 aa12.51□□□□□ -0.41
CTPS1-203ENST00000463285 NEUROD1Q13562 356 aa12.51□□□□□ -0.41
CTPS1-203ENST00000463285 HDGFL2Q7Z4V5 671 aaPredicted RBP12.51□□□□□ -0.41
CTPS1-203ENST00000463285 NLGN2Q8NFZ4 835 aa12.51□□□□□ -0.41
CTPS1-203ENST00000463285 SIN3AQ96ST3 1273 aa12.51□□□□□ -0.41
CTPS1-203ENST00000463285 SBNO2Q9Y2G9 1366 aa12.51□□□□□ -0.41
CTPS1-203ENST00000463285 REM2Q8IYK8 340 aaPredicted RBP12.5□□□□□ -0.41
CTPS1-203ENST00000463285 CD163L1Q9NR16 1453 aa12.5□□□□□ -0.41
CTPS1-203ENST00000463285 QSER1Q2KHR3 1735 aa12.5□□□□□ -0.41
CTPS1-203ENST00000463285 PRIM1P49642 420 aaKnown RBP12.48□□□□□ -0.41
CTPS1-203ENST00000463285 SLC12A5Q9H2X9 1139 aa12.48□□□□□ -0.41
CTPS1-203ENST00000463285 TUBGCP6Q96RT7 1819 aa12.48□□□□□ -0.41
CTPS1-203ENST00000463285 EDC4Q6P2E9 1401 aaKnown RBP12.47□□□□□ -0.41
CTPS1-203ENST00000463285 ANKRD36BQ8N2N9 1353 aa12.47□□□□□ -0.41
CTPS1-203ENST00000463285 IP6K1Q92551 441 aa12.47□□□□□ -0.41
CTPS1-203ENST00000463285 COL24A1Q17RW2 1714 aa12.47□□□□□ -0.41
CTPS1-203ENST00000463285 DOT1LQ8TEK3 1739 aa12.47□□□□□ -0.41
CTPS1-203ENST00000463285 SHANK3Q9BYB0 1731 aa12.47□□□□□ -0.41
CTPS1-203ENST00000463285 GRIN3BO60391 1043 aa12.46□□□□□ -0.41
CTPS1-203ENST00000463285 YBX3P16989 372 aaKnown RBP eCLIP12.46□□□□□ -0.41
CTPS1-203ENST00000463285 TERF2IPQ9NYB0 399 aa12.46□□□□□ -0.41
CTPS1-203ENST00000463285 CCNL1Q9UK58 526 aaPredicted RBP12.46□□□□□ -0.41
CTPS1-203ENST00000463285 A0A1W2PP64 1363 aa12.45□□□□□ -0.42
CTPS1-203ENST00000463285 FAM208AQ9UK61 1670 aaKnown RBP12.45□□□□□ -0.42
CTPS1-203ENST00000463285 IFFO2Q5TF58 517 aa12.45□□□□□ -0.42
CTPS1-203ENST00000463285 MSL1Q68DK7 614 aa12.45□□□□□ -0.42
CTPS1-203ENST00000463285 CARD11Q9BXL7 1154 aa12.45□□□□□ -0.42
CTPS1-203ENST00000463285 NSD2O96028 1365 aa12.44□□□□□ -0.42
CTPS1-203ENST00000463285 AMPHP49418 695 aa12.44□□□□□ -0.42
CTPS1-203ENST00000463285 COL23A1Q86Y22 540 aaPredicted RBP12.44□□□□□ -0.42
CTPS1-203ENST00000463285 ZCRB1Q8TBF4 217 aaKnown RBP12.44□□□□□ -0.42
CTPS1-203ENST00000463285 LY75O60449 1722 aa12.44□□□□□ -0.42
CTPS1-203ENST00000463285 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
CTPS1-203ENST00000463285 ATP10DQ9P241 1426 aa12.43□□□□□ -0.42
CTPS1-203ENST00000463285 USP47Q96K76 1375 aa12.43□□□□□ -0.42
CTPS1-203ENST00000463285 MEGF6O75095 1541 aa12.42□□□□□ -0.42
CTPS1-203ENST00000463285 MAP3K19Q56UN5 1328 aa12.42□□□□□ -0.42
CTPS1-203ENST00000463285 FBLN1P23142 703 aa12.42□□□□□ -0.42
CTPS1-203ENST00000463285 HOXC9P31274 260 aa12.42□□□□□ -0.42
CTPS1-203ENST00000463285 COG3Q96JB2 828 aa12.42□□□□□ -0.42
CTPS1-203ENST00000463285 RGPD2P0DJD1 1756 aa12.41□□□□□ -0.42
CTPS1-203ENST00000463285 USHBP1Q8N6Y0 703 aa12.4□□□□□ -0.42
CTPS1-203ENST00000463285 GPBP1L1Q9HC44 474 aaPredicted RBP12.4□□□□□ -0.42
CTPS1-203ENST00000463285 PITPNM1O00562 1244 aa12.39□□□□□ -0.43
CTPS1-203ENST00000463285 ZNF526Q8TF50 670 aaPredicted RBP12.39□□□□□ -0.43
CTPS1-203ENST00000463285 SPDYE2BA6NHP3 402 aa12.38□□□□□ -0.43
CTPS1-203ENST00000463285 SPDYE6P0CI01 402 aa12.38□□□□□ -0.43
CTPS1-203ENST00000463285 RRS1Q15050 365 aaKnown RBP12.38□□□□□ -0.43
CTPS1-203ENST00000463285 SPDYE2Q495Y8 402 aa12.38□□□□□ -0.43
CTPS1-203ENST00000463285 NBPF6Q5VWK0 638 aa12.38□□□□□ -0.43
CTPS1-203ENST00000463285 RAPGEF4Q8WZA2 1011 aa12.38□□□□□ -0.43
CTPS1-203ENST00000463285 NBPF4Q96M43 638 aa12.38□□□□□ -0.43
CTPS1-203ENST00000463285 WWC3Q9ULE0 1092 aa12.38□□□□□ -0.43
CTPS1-203ENST00000463285 CD2APQ9Y5K6 639 aa12.38□□□□□ -0.43
CTPS1-203ENST00000463285 C5P01031 1676 aa12.38□□□□□ -0.43
CTPS1-203ENST00000463285 GOLGB1Q14789 3259 aaKnown RBP12.38□□□□□ -0.43
CTPS1-203ENST00000463285 TATP17735 454 aaPredicted RBP12.37□□□□□ -0.43
CTPS1-203ENST00000463285 FLAD1Q8NFF5 587 aa12.37□□□□□ -0.43
CTPS1-203ENST00000463285 PUS7Q96PZ0 661 aaKnown RBP12.37□□□□□ -0.43
CTPS1-203ENST00000463285 SMG6Q86US8 1419 aaKnown RBP12.37□□□□□ -0.43
CTPS1-203ENST00000463285 RTL1A6NKG5 1358 aa12.36□□□□□ -0.43
CTPS1-203ENST00000463285 PALLDQ8WX93 1383 aa12.36□□□□□ -0.43
CTPS1-203ENST00000463285 MPRIPQ6WCQ1 1025 aa12.36□□□□□ -0.43
CTPS1-203ENST00000463285 CGNL1Q0VF96 1302 aa12.36□□□□□ -0.43
CTPS1-203ENST00000463285 PIP4P2Q8N4L2 257 aa12.35□□□□□ -0.43
CTPS1-203ENST00000463285 AK7Q96M32 723 aa12.35□□□□□ -0.43
CTPS1-203ENST00000463285 PCDH11XQ9BZA7 1347 aa12.35□□□□□ -0.43
CTPS1-203ENST00000463285 PCDH11YQ9BZA8 1340 aa12.35□□□□□ -0.43
CTPS1-203ENST00000463285 ADCY9O60503 1353 aa12.34□□□□□ -0.43
CTPS1-203ENST00000463285 PHF14O94880 888 aa12.34□□□□□ -0.43
CTPS1-203ENST00000463285 HSPA6P17066 643 aa12.34□□□□□ -0.43
CTPS1-203ENST00000463285 HMGB2P26583 209 aaKnown RBP12.34□□□□□ -0.43
CTPS1-203ENST00000463285 GGNBP2Q9H3C7 697 aa12.34□□□□□ -0.43
CTPS1-203ENST00000463285 IGSF1Q8N6C5 1336 aa12.34□□□□□ -0.43
CTPS1-203ENST00000463285 TONSLQ96HA7 1378 aa12.33□□□□□ -0.44
CTPS1-203ENST00000463285 ST20-MTHFSA0A0A6YYL1 179 aa12.33□□□□□ -0.44
CTPS1-203ENST00000463285 TAF1LQ8IZX4 1826 aa12.32□□□□□ -0.44
CTPS1-203ENST00000463285 C4BP0C0L5 1744 aa12.32□□□□□ -0.44
CTPS1-203ENST00000463285 HSP90AB2PQ58FF8 381 aa12.32□□□□□ -0.44
CTPS1-203ENST00000463285 SMIM5Q71RC9 77 aa12.32□□□□□ -0.44
CTPS1-203ENST00000463285 AMIGO3Q86WK7 504 aa12.32□□□□□ -0.44
CTPS1-203ENST00000463285 SMARCC1Q92922 1105 aaPredicted RBP12.32□□□□□ -0.44
CTPS1-203ENST00000463285 TESK2Q96S53 571 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms