RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 CPLX2Q6PUV4 134 aaKnown RBP14.33□□□□□ -0.12
RBM39-223ENST00000463004 IL27Q8NEV9 243 aa14.33□□□□□ -0.12
RBM39-223ENST00000463004 KIF24Q5T7B8 1368 aa14.33□□□□□ -0.12
RBM39-223ENST00000463004 TRPM1Q7Z4N2 1603 aa14.33□□□□□ -0.12
RBM39-223ENST00000463004 MCM2P49736 904 aa14.32□□□□□ -0.12
RBM39-223ENST00000463004 AMOTL1Q8IY63 956 aa14.32□□□□□ -0.12
RBM39-223ENST00000463004 BLMP54132 1417 aaPredicted RBP14.32□□□□□ -0.12
RBM39-223ENST00000463004 GCP02774 474 aa14.32□□□□□ -0.12
RBM39-223ENST00000463004 GNL2Q13823 731 aaKnown RBP14.32□□□□□ -0.12
RBM39-223ENST00000463004 TMEM57Q8N5G2 664 aa14.32□□□□□ -0.12
RBM39-223ENST00000463004 LRRC59Q96AG4 307 aaKnown RBP14.32□□□□□ -0.12
RBM39-223ENST00000463004 DDX11L8A8MPP1 907 aa14.31□□□□□ -0.12
RBM39-223ENST00000463004 GOLGA6L6A8MZA4 724 aa14.31□□□□□ -0.12
RBM39-223ENST00000463004 EXOC5O00471 708 aa14.31□□□□□ -0.12
RBM39-223ENST00000463004 CHD1LQ86WJ1 897 aa14.31□□□□□ -0.12
RBM39-223ENST00000463004 C22orf23Q9BZE7 217 aa14.31□□□□□ -0.12
RBM39-223ENST00000463004 MBIPQ9NS73 344 aa14.31□□□□□ -0.12
RBM39-223ENST00000463004 MAP3K19Q56UN5 1328 aa14.31□□□□□ -0.12
RBM39-223ENST00000463004 ANKARQ7Z5J8 1434 aa14.31□□□□□ -0.12
RBM39-223ENST00000463004 DNAJC5Q9H3Z4 198 aa14.3□□□□□ -0.12
RBM39-223ENST00000463004 NEURL4Q96JN8 1562 aa14.3□□□□□ -0.12
RBM39-223ENST00000463004 CAMSAP1Q5T5Y3 1602 aa14.3□□□□□ -0.12
RBM39-223ENST00000463004 E9PCH4 1651 aa14.3□□□□□ -0.12
RBM39-223ENST00000463004 NUTM2BA6NNL0 878 aaPredicted RBP14.3□□□□□ -0.12
RBM39-223ENST00000463004 NUTM2EB1AL46 878 aaPredicted RBP14.3□□□□□ -0.12
RBM39-223ENST00000463004 HOXC9P31274 260 aa14.3□□□□□ -0.12
RBM39-223ENST00000463004 NUTM2AQ8IVF1 878 aaPredicted RBP14.3□□□□□ -0.12
RBM39-223ENST00000463004 THUMPD2Q9BTF0 503 aaKnown RBP14.3□□□□□ -0.12
RBM39-223ENST00000463004 CDCA7Q9BWT1 371 aaPredicted RBP14.3□□□□□ -0.12
RBM39-223ENST00000463004 RSPH6AQ9H0K4 717 aa14.3□□□□□ -0.12
RBM39-223ENST00000463004 NRDCO43847 1150 aa14.3□□□□□ -0.12
RBM39-223ENST00000463004 ZNF652Q9Y2D9 606 aa14.3□□□□□ -0.12
RBM39-223ENST00000463004 METP08581 1390 aa14.29□□□□□ -0.12
RBM39-223ENST00000463004 IL13P35225 146 aa14.29□□□□□ -0.12
RBM39-223ENST00000463004 MAP3K5Q99683 1374 aa14.29□□□□□ -0.12
RBM39-223ENST00000463004 VPS37DQ86XT2 251 aa14.29□□□□□ -0.12
RBM39-223ENST00000463004 HOXB7P09629 217 aa14.29□□□□□ -0.12
RBM39-223ENST00000463004 DNAAF4Q8WXU2 420 aa14.29□□□□□ -0.12
RBM39-223ENST00000463004 PSMA5P28066 241 aa14.28□□□□□ -0.12
RBM39-223ENST00000463004 SKOR2Q2VWA4 1001 aaPredicted RBP14.28□□□□□ -0.12
RBM39-223ENST00000463004 ANO2Q9NQ90 1003 aa14.28□□□□□ -0.12
RBM39-223ENST00000463004 SYNE3Q6ZMZ3 975 aa14.28□□□□□ -0.12
RBM39-223ENST00000463004 SNRPA1P09661 255 aaKnown RBP14.28□□□□□ -0.12
RBM39-223ENST00000463004 TRDNQ13061 729 aa14.28□□□□□ -0.12
RBM39-223ENST00000463004 DCTN1Q14203 1278 aa14.28□□□□□ -0.12
RBM39-223ENST00000463004 ARHGEF40Q8TER5 1519 aa14.28□□□□□ -0.12
RBM39-223ENST00000463004 KIF1BPQ96EK5 621 aa14.27□□□□□ -0.12
RBM39-223ENST00000463004 TBC1D2BQ9UPU7 963 aa14.27□□□□□ -0.12
RBM39-223ENST00000463004 MADDQ8WXG6 1647 aa14.27□□□□□ -0.12
RBM39-223ENST00000463004 FLIIQ13045 1269 aa14.27□□□□□ -0.12
RBM39-223ENST00000463004 RBM33Q96EV2 1170 aaKnown RBP14.27□□□□□ -0.12
RBM39-223ENST00000463004 SLKQ9H2G2 1235 aaPredicted RBP14.27□□□□□ -0.12
RBM39-223ENST00000463004 TRIM27P14373 513 aa14.27□□□□□ -0.13
RBM39-223ENST00000463004 PIP4K2BP78356 416 aa14.27□□□□□ -0.13
RBM39-223ENST00000463004 ZCRB1Q8TBF4 217 aaKnown RBP14.27□□□□□ -0.13
RBM39-223ENST00000463004 DIP2BQ9P265 1576 aa14.27□□□□□ -0.13
RBM39-223ENST00000463004 GNL3LQ9NVN8 582 aaKnown RBP14.27□□□□□ -0.13
RBM39-223ENST00000463004 CCDC158Q5M9N0 1113 aa14.26□□□□□ -0.13
RBM39-223ENST00000463004 MPRIPQ6WCQ1 1025 aa14.26□□□□□ -0.13
RBM39-223ENST00000463004 USHBP1Q8N6Y0 703 aa14.26□□□□□ -0.13
RBM39-223ENST00000463004 KIDINS220Q9ULH0 1771 aa14.26□□□□□ -0.13
RBM39-223ENST00000463004 RTL1A6NKG5 1358 aa14.26□□□□□ -0.13
RBM39-223ENST00000463004 NUCB2P80303 420 aa14.26□□□□□ -0.13
RBM39-223ENST00000463004 RABEP1Q15276 862 aa14.26□□□□□ -0.13
RBM39-223ENST00000463004 CHMP5Q9NZZ3 219 aa14.26□□□□□ -0.13
RBM39-223ENST00000463004 SRGAP3O43295 1099 aa14.26□□□□□ -0.13
RBM39-223ENST00000463004 PHF14O94880 888 aa14.26□□□□□ -0.13
RBM39-223ENST00000463004 CCDC57Q2TAC2 916 aa14.26□□□□□ -0.13
RBM39-223ENST00000463004 EYA1Q99502 592 aa14.26□□□□□ -0.13
RBM39-223ENST00000463004 PTMAP06454 111 aaKnown RBP14.25□□□□□ -0.13
RBM39-223ENST00000463004 NEUROD6Q96NK8 337 aa14.25□□□□□ -0.13
RBM39-223ENST00000463004 BACH2Q9BYV9 841 aa14.25□□□□□ -0.13
RBM39-223ENST00000463004 ZSCAN25Q6NSZ9 544 aa14.25□□□□□ -0.13
RBM39-223ENST00000463004 ALDH1L1O75891 902 aa14.25□□□□□ -0.13
RBM39-223ENST00000463004 HDAC1Q13547 482 aaPredicted RBP14.25□□□□□ -0.13
RBM39-223ENST00000463004 DCAF5Q96JK2 942 aa14.25□□□□□ -0.13
RBM39-223ENST00000463004 ABCA6Q8N139 1617 aa14.24□□□□□ -0.13
RBM39-223ENST00000463004 CEP152O94986 1710 aa14.24□□□□□ -0.13
RBM39-223ENST00000463004 MSH5O43196 834 aa14.24□□□□□ -0.13
RBM39-223ENST00000463004 PPRC1Q5VV67 1664 aaKnown RBP14.24□□□□□ -0.13
RBM39-223ENST00000463004 MYL6BP14649 208 aa14.24□□□□□ -0.13
RBM39-223ENST00000463004 SMARCC1Q92922 1105 aaPredicted RBP14.24□□□□□ -0.13
RBM39-223ENST00000463004 FSD1Q9BTV5 496 aa14.24□□□□□ -0.13
RBM39-223ENST00000463004 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.24□□□□□ -0.132e-8■□□□□ 11.3
RBM39-223ENST00000463004 ANO8Q9HCE9 1232 aaPredicted RBP14.24□□□□□ -0.13
RBM39-223ENST00000463004 A0A087WZG4 1122 aa14.23□□□□□ -0.13
RBM39-223ENST00000463004 IL2RBP14784 551 aa14.23□□□□□ -0.13
RBM39-223ENST00000463004 HSPA2P54652 639 aa14.23□□□□□ -0.13
RBM39-223ENST00000463004 CEP126Q9P2H0 1117 aa14.23□□□□□ -0.13
RBM39-223ENST00000463004 PDIA4P13667 645 aaKnown RBP14.23□□□□□ -0.13
RBM39-223ENST00000463004 DLC1Q96QB1 1528 aa14.23□□□□□ -0.13
RBM39-223ENST00000463004 MTHFSDQ2M296 383 aaKnown RBP14.23□□□□□ -0.13
RBM39-223ENST00000463004 ZRANB1Q9UGI0 708 aa14.23□□□□□ -0.13
RBM39-223ENST00000463004 AKAP2Q9Y2D5 859 aa14.23□□□□□ -0.13
RBM39-223ENST00000463004 KIAA1210Q9ULL0 1709 aa14.23□□□□□ -0.13
RBM39-223ENST00000463004 FAM184AQ8NB25 1140 aa14.22□□□□□ -0.13
RBM39-223ENST00000463004 SPRYD3Q8NCJ5 442 aa14.22□□□□□ -0.13
RBM39-223ENST00000463004 NGLY1Q96IV0 654 aa14.22□□□□□ -0.13
RBM39-223ENST00000463004 ALKQ9UM73 1620 aa14.22□□□□□ -0.13
RBM39-223ENST00000463004 C1orf115Q9H7X2 142 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms