RNA–Protein interactions for RNA: ENST00000462268.1

SYN3-207, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-207ENST00000462268 FOXD4L1Q9NU39 408 aa12.14□□□□□ -0.47
SYN3-207ENST00000462268 INSRP06213 1382 aa12.14□□□□□ -0.47
SYN3-207ENST00000462268 PEAK1Q9H792 1746 aa12.13□□□□□ -0.47
SYN3-207ENST00000462268 NSD2O96028 1365 aa12.13□□□□□ -0.47
SYN3-207ENST00000462268 WNK3Q9BYP7 1800 aa12.13□□□□□ -0.47
SYN3-207ENST00000462268 PLSCR1O15162 318 aa12.12□□□□□ -0.47
SYN3-207ENST00000462268 PANK3Q9H999 370 aa12.12□□□□□ -0.47
SYN3-207ENST00000462268 FAM208AQ9UK61 1670 aaKnown RBP12.12□□□□□ -0.47
SYN3-207ENST00000462268 HSP90AB2PQ58FF8 381 aa12.11□□□□□ -0.47
SYN3-207ENST00000462268 NBPF14Q5TI25 921 aa12.11□□□□□ -0.47
SYN3-207ENST00000462268 KIF20BQ96Q89 1820 aa12.11□□□□□ -0.47
SYN3-207ENST00000462268 RGPD5Q99666 1765 aa12.1□□□□□ -0.47
SYN3-207ENST00000462268 SRCAPQ6ZRS2 3230 aa12.1□□□□□ -0.47
SYN3-207ENST00000462268 PSDA5PKW4 1024 aaPredicted RBP12.1□□□□□ -0.47
SYN3-207ENST00000462268 PPM1GO15355 546 aaPredicted RBP12.1□□□□□ -0.47
SYN3-207ENST00000462268 RAPGEF4Q8WZA2 1011 aa12.1□□□□□ -0.47
SYN3-207ENST00000462268 EMILIN1Q9Y6C2 1016 aa12.1□□□□□ -0.47
SYN3-207ENST00000462268 KIF7Q2M1P5 1343 aa12.1□□□□□ -0.47
SYN3-207ENST00000462268 R3HDM1Q15032 1099 aaKnown RBP12.09□□□□□ -0.47
SYN3-207ENST00000462268 NBPF6Q5VWK0 638 aa12.09□□□□□ -0.47
SYN3-207ENST00000462268 NBPF4Q96M43 638 aa12.09□□□□□ -0.47
SYN3-207ENST00000462268 WASHC2AQ641Q2 1341 aa12.09□□□□□ -0.47
SYN3-207ENST00000462268 MEGF6O75095 1541 aa12.08□□□□□ -0.48
SYN3-207ENST00000462268 TATP17735 454 aaPredicted RBP12.08□□□□□ -0.48
SYN3-207ENST00000462268 ZCRB1Q8TBF4 217 aaKnown RBP12.08□□□□□ -0.48
SYN3-207ENST00000462268 DDX54Q8TDD1 881 aaKnown RBP12.08□□□□□ -0.48
SYN3-207ENST00000462268 KNSTRNQ9Y448 316 aa12.08□□□□□ -0.48
SYN3-207ENST00000462268 FXR2P51116 673 aaKnown RBP eCLIP12.07□□□□□ -0.48
SYN3-207ENST00000462268 PTF1AQ7RTS3 328 aa12.07□□□□□ -0.48
SYN3-207ENST00000462268 USHBP1Q8N6Y0 703 aa12.07□□□□□ -0.48
SYN3-207ENST00000462268 ACSBG1Q96GR2 724 aa12.07□□□□□ -0.48
SYN3-207ENST00000462268 POLKQ9UBT6 870 aa12.07□□□□□ -0.48
SYN3-207ENST00000462268 PITPNM1O00562 1244 aa12.06□□□□□ -0.48
SYN3-207ENST00000462268 KCNQ2O43526 872 aa12.06□□□□□ -0.48
SYN3-207ENST00000462268 TNNT2P45379 298 aaPredicted RBP12.06□□□□□ -0.48
SYN3-207ENST00000462268 RREB1Q92766 1687 aa12.06□□□□□ -0.48
SYN3-207ENST00000462268 PCDH11XQ9BZA7 1347 aa12.06□□□□□ -0.48
SYN3-207ENST00000462268 PCDH11YQ9BZA8 1340 aa12.06□□□□□ -0.48
SYN3-207ENST00000462268 RGPD3A6NKT7 1758 aaPredicted RBP12.05□□□□□ -0.48
SYN3-207ENST00000462268 RGPD4Q7Z3J3 1758 aa12.05□□□□□ -0.48
SYN3-207ENST00000462268 HAX1O00165 279 aa12.05□□□□□ -0.48
SYN3-207ENST00000462268 TXNRD1Q16881 649 aa12.05□□□□□ -0.48
SYN3-207ENST00000462268 MORC1Q86VD1 984 aa12.05□□□□□ -0.48
SYN3-207ENST00000462268 NCAPD2Q15021 1401 aa12.04□□□□□ -0.48
SYN3-207ENST00000462268 NHSQ6T4R5 1651 aa12.04□□□□□ -0.48
SYN3-207ENST00000462268 SYTL4Q96C24 671 aaPredicted RBP12.03□□□□□ -0.48
SYN3-207ENST00000462268 LRP5O75197 1615 aa12.03□□□□□ -0.48
SYN3-207ENST00000462268 PLEKHG2Q9H7P9 1386 aa12.03□□□□□ -0.48
SYN3-207ENST00000462268 NUP188Q5SRE5 1749 aa12.03□□□□□ -0.48
SYN3-207ENST00000462268 ANKRD26Q9UPS8 1709 aa12.03□□□□□ -0.48
SYN3-207ENST00000462268 EIF4A2Q14240 407 aaKnown RBP12.02□□□□□ -0.49
SYN3-207ENST00000462268 AMER1Q5JTC6 1135 aaPredicted RBP12.02□□□□□ -0.49
SYN3-207ENST00000462268 PROM2Q8N271 834 aa12.02□□□□□ -0.49
SYN3-207ENST00000462268 EYA1Q99502 592 aa12.02□□□□□ -0.49
SYN3-207ENST00000462268 ANO8Q9HCE9 1232 aaPredicted RBP12.02□□□□□ -0.49
SYN3-207ENST00000462268 STK32BQ9NY57 414 aa12.02□□□□□ -0.49
SYN3-207ENST00000462268 PRIM1P49642 420 aaKnown RBP12.01□□□□□ -0.49
SYN3-207ENST00000462268 SPG7Q9UQ90 795 aa12.01□□□□□ -0.49
SYN3-207ENST00000462268 SBF2Q86WG5 1849 aa12□□□□□ -0.49
SYN3-207ENST00000462268 SLC27A3Q5K4L6 730 aa12□□□□□ -0.49
SYN3-207ENST00000462268 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12□□□□□ -0.49
SYN3-207ENST00000462268 IGSF1Q8N6C5 1336 aa12□□□□□ -0.49
SYN3-207ENST00000462268 NPC1L1Q9UHC9 1359 aa11.99□□□□□ -0.49
SYN3-207ENST00000462268 CYP27B1O15528 508 aa11.98□□□□□ -0.49
SYN3-207ENST00000462268 PER1O15534 1290 aaPredicted RBP11.98□□□□□ -0.49
SYN3-207ENST00000462268 SLC15A2Q16348 729 aa11.98□□□□□ -0.49
SYN3-207ENST00000462268 SPON1Q9HCB6 807 aa11.98□□□□□ -0.49
SYN3-207ENST00000462268 HMGB2P26583 209 aaKnown RBP11.97□□□□□ -0.49
SYN3-207ENST00000462268 NKX1-1Q15270 411 aaPredicted RBP11.96□□□□□ -0.49
SYN3-207ENST00000462268 CC2D1BQ5T0F9 858 aaKnown RBP11.96□□□□□ -0.49
SYN3-207ENST00000462268 IFNL2Q8IZJ0 200 aa11.96□□□□□ -0.49
SYN3-207ENST00000462268 RGPD2P0DJD1 1756 aa11.95□□□□□ -0.5
SYN3-207ENST00000462268 DOT1LQ8TEK3 1739 aa11.95□□□□□ -0.5
SYN3-207ENST00000462268 SHANK3Q9BYB0 1731 aa11.95□□□□□ -0.5
SYN3-207ENST00000462268 PHKG2P15735 406 aa11.95□□□□□ -0.5
SYN3-207ENST00000462268 AMOTQ4VCS5 1084 aa11.95□□□□□ -0.5
SYN3-207ENST00000462268 LRRC4BQ9NT99 713 aa11.95□□□□□ -0.5
SYN3-207ENST00000462268 CCNL1Q9UK58 526 aaPredicted RBP11.95□□□□□ -0.5
SYN3-207ENST00000462268 PKD1L3Q7Z443 1732 aa11.94□□□□□ -0.5
SYN3-207ENST00000462268 PAPPAQ13219 1627 aa11.94□□□□□ -0.5
SYN3-207ENST00000462268 HSP90AB1P08238 724 aaKnown RBP11.94□□□□□ -0.5
SYN3-207ENST00000462268 IL13P35225 146 aa11.94□□□□□ -0.5
SYN3-207ENST00000462268 MTHFSP49914 203 aa11.94□□□□□ -0.5
SYN3-207ENST00000462268 PLEKHO1Q53GL0 409 aaPredicted RBP11.94□□□□□ -0.5
SYN3-207ENST00000462268 MPRIPQ6WCQ1 1025 aa11.94□□□□□ -0.5
SYN3-207ENST00000462268 SMARCC1Q92922 1105 aaPredicted RBP11.94□□□□□ -0.5
SYN3-207ENST00000462268 PPP1R1BQ9UD71 204 aaPredicted RBP11.94□□□□□ -0.5
SYN3-207ENST00000462268 BTAF1O14981 1849 aa11.94□□□□□ -0.5
SYN3-207ENST00000462268 PALLDQ8WX93 1383 aa11.93□□□□□ -0.5
SYN3-207ENST00000462268 ZNF827Q17R98 1081 aa11.93□□□□□ -0.5
SYN3-207ENST00000462268 SULT6B1Q6IMI4 303 aa11.93□□□□□ -0.5
SYN3-207ENST00000462268 KDRP35968 1356 aa11.92□□□□□ -0.5
SYN3-207ENST00000462268 ZBTB7AO95365 584 aa11.92□□□□□ -0.5
SYN3-207ENST00000462268 MTFR1LQ9H019 292 aa11.92□□□□□ -0.5
SYN3-207ENST00000462268 TMOD3Q9NYL9 352 aa11.92□□□□□ -0.5
SYN3-207ENST00000462268 MAP2P11137 1827 aaKnown RBP11.92□□□□□ -0.5
SYN3-207ENST00000462268 DIAPH1O60610 1272 aaKnown RBP11.91□□□□□ -0.5
SYN3-207ENST00000462268 C1orf141Q5JVX7 400 aa11.91□□□□□ -0.5
SYN3-207ENST00000462268 ZNF530Q6P9A1 599 aaPredicted RBP11.91□□□□□ -0.5
SYN3-207ENST00000462268 AEBP1Q8IUX7 1158 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms