RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 IGSF1Q8N6C5 1336 aa13.85□□□□□ -0.19
SPTAN1-204ENST00000461855 TATP17735 454 aaPredicted RBP13.84□□□□□ -0.19
SPTAN1-204ENST00000461855 ZEB1P37275 1124 aaPredicted RBP13.84□□□□□ -0.19
SPTAN1-204ENST00000461855 CC2D1BQ5T0F9 858 aaKnown RBP13.84□□□□□ -0.19
SPTAN1-204ENST00000461855 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.84□□□□□ -0.197e-12■■□□□ 14.4
SPTAN1-204ENST00000461855 IL13P35225 146 aa13.83□□□□□ -0.2
SPTAN1-204ENST00000461855 MTHFSP49914 203 aa13.83□□□□□ -0.2
SPTAN1-204ENST00000461855 EZH2Q15910 746 aaKnown RBP13.83□□□□□ -0.2
SPTAN1-204ENST00000461855 SHANK3Q9BYB0 1731 aa13.82□□□□□ -0.2
SPTAN1-204ENST00000461855 KCNQ2O43526 872 aa13.82□□□□□ -0.2
SPTAN1-204ENST00000461855 DDX54Q8TDD1 881 aaKnown RBP13.82□□□□□ -0.2
SPTAN1-204ENST00000461855 NKX1-1Q15270 411 aaPredicted RBP13.81□□□□□ -0.2
SPTAN1-204ENST00000461855 PROM2Q8N271 834 aa13.81□□□□□ -0.2
SPTAN1-204ENST00000461855 KDRP35968 1356 aa13.81□□□□□ -0.2
SPTAN1-204ENST00000461855 RGPD3A6NKT7 1758 aaPredicted RBP13.81□□□□□ -0.2
SPTAN1-204ENST00000461855 RGPD4Q7Z3J3 1758 aa13.81□□□□□ -0.2
SPTAN1-204ENST00000461855 NHSQ6T4R5 1651 aa13.8□□□□□ -0.2
SPTAN1-204ENST00000461855 CYP27B1O15528 508 aa13.8□□□□□ -0.2
SPTAN1-204ENST00000461855 PCDH11XQ9BZA7 1347 aa13.8□□□□□ -0.2
SPTAN1-204ENST00000461855 PCDH11YQ9BZA8 1340 aa13.8□□□□□ -0.2
SPTAN1-204ENST00000461855 PKD1L3Q7Z443 1732 aa13.79□□□□□ -0.2
SPTAN1-204ENST00000461855 RREB1Q92766 1687 aa13.79□□□□□ -0.2
SPTAN1-204ENST00000461855 ACSBG1Q96GR2 724 aa13.78□□□□□ -0.2
SPTAN1-204ENST00000461855 COL3A1P02461 1466 aaPredicted RBP13.78□□□□□ -0.2
SPTAN1-204ENST00000461855 SPG7Q9UQ90 795 aa13.77□□□□□ -0.21
SPTAN1-204ENST00000461855 PRIM1P49642 420 aaKnown RBP13.76□□□□□ -0.21
SPTAN1-204ENST00000461855 AEBP1Q8IUX7 1158 aa13.76□□□□□ -0.21
SPTAN1-204ENST00000461855 DIAPH1O60610 1272 aaKnown RBP13.75□□□□□ -0.21
SPTAN1-204ENST00000461855 PHKG2P15735 406 aa13.75□□□□□ -0.21
SPTAN1-204ENST00000461855 PPP2R1AP30153 589 aa13.75□□□□□ -0.21
SPTAN1-204ENST00000461855 TXNRD1Q16881 649 aa13.75□□□□□ -0.21
SPTAN1-204ENST00000461855 SULT6B1Q6IMI4 303 aa13.75□□□□□ -0.21
SPTAN1-204ENST00000461855 NUP188Q5SRE5 1749 aa13.74□□□□□ -0.21
SPTAN1-204ENST00000461855 AMOTQ4VCS5 1084 aa13.74□□□□□ -0.21
SPTAN1-204ENST00000461855 IFNL2Q8IZJ0 200 aa13.74□□□□□ -0.21
SPTAN1-204ENST00000461855 SRCAPQ6ZRS2 3230 aa13.73□□□□□ -0.21
SPTAN1-204ENST00000461855 PLEKHO1Q53GL0 409 aaPredicted RBP13.73□□□□□ -0.21
SPTAN1-204ENST00000461855 BTAF1O14981 1849 aa13.72□□□□□ -0.21
SPTAN1-204ENST00000461855 DOT1LQ8TEK3 1739 aa13.72□□□□□ -0.21
SPTAN1-204ENST00000461855 DDX10Q13206 875 aaKnown RBP13.71□□□□□ -0.21
SPTAN1-204ENST00000461855 SLC27A3Q5K4L6 730 aa13.71□□□□□ -0.21
SPTAN1-204ENST00000461855 NBPF14Q5TI25 921 aa13.71□□□□□ -0.21
SPTAN1-204ENST00000461855 LRRC4BQ9NT99 713 aa13.71□□□□□ -0.21
SPTAN1-204ENST00000461855 R3HDM1Q15032 1099 aaKnown RBP13.7□□□□□ -0.22
SPTAN1-204ENST00000461855 ANO8Q9HCE9 1232 aaPredicted RBP13.7□□□□□ -0.22
SPTAN1-204ENST00000461855 TOGARAM1Q9Y4F4 1720 aa13.7□□□□□ -0.22
SPTAN1-204ENST00000461855 PSDA5PKW4 1024 aaPredicted RBP13.69□□□□□ -0.22
SPTAN1-204ENST00000461855 HSP90AB1P08238 724 aaKnown RBP13.69□□□□□ -0.22
SPTAN1-204ENST00000461855 CNGB1Q14028 1251 aaPredicted RBP13.69□□□□□ -0.22
SPTAN1-204ENST00000461855 PIGBQ92521 554 aa13.69□□□□□ -0.22
SPTAN1-204ENST00000461855 SYTL4Q96C24 671 aaPredicted RBP13.69□□□□□ -0.22
SPTAN1-204ENST00000461855 DCAF5Q96JK2 942 aa13.69□□□□□ -0.22
SPTAN1-204ENST00000461855 PAPPAQ13219 1627 aa13.68□□□□□ -0.22
SPTAN1-204ENST00000461855 ERVV-2B6SEH9 535 aa13.68□□□□□ -0.22
SPTAN1-204ENST00000461855 HMOX1P09601 288 aa13.68□□□□□ -0.22
SPTAN1-204ENST00000461855 RALBP1Q15311 655 aa13.68□□□□□ -0.22
SPTAN1-204ENST00000461855 ZNF530Q6P9A1 599 aaPredicted RBP13.68□□□□□ -0.22
SPTAN1-204ENST00000461855 CFAP53Q96M91 514 aa13.68□□□□□ -0.22
SPTAN1-204ENST00000461855 LY75O60449 1722 aa13.67□□□□□ -0.22
SPTAN1-204ENST00000461855 KDM6AO15550 1401 aaPredicted RBP13.67□□□□□ -0.22
SPTAN1-204ENST00000461855 SLC15A2Q16348 729 aa13.67□□□□□ -0.22
SPTAN1-204ENST00000461855 MPRIPQ6WCQ1 1025 aa13.67□□□□□ -0.22
SPTAN1-204ENST00000461855 KAT6BQ8WYB5 2073 aa13.67□□□□□ -0.22
SPTAN1-204ENST00000461855 MTHFSDQ2M296 383 aaKnown RBP13.66□□□□□ -0.22
SPTAN1-204ENST00000461855 AKAP4Q5JQC9 854 aa13.66□□□□□ -0.22
SPTAN1-204ENST00000461855 SMARCC1Q92922 1105 aaPredicted RBP13.66□□□□□ -0.22
SPTAN1-204ENST00000461855 AKT1S1Q96B36 256 aa13.66□□□□□ -0.22
SPTAN1-204ENST00000461855 ITGB4P16144 1822 aa13.65□□□□□ -0.22
SPTAN1-204ENST00000461855 RSPH6AQ9H0K4 717 aa13.65□□□□□ -0.22
SPTAN1-204ENST00000461855 NUDCQ9Y266 331 aa13.65□□□□□ -0.22
SPTAN1-204ENST00000461855 PALLDQ8WX93 1383 aa13.64□□□□□ -0.23
SPTAN1-204ENST00000461855 U2SURPO15042 1029 aaKnown RBP13.64□□□□□ -0.23
SPTAN1-204ENST00000461855 FCHSD2O94868 740 aa13.64□□□□□ -0.23
SPTAN1-204ENST00000461855 C1orf141Q5JVX7 400 aa13.64□□□□□ -0.23
SPTAN1-204ENST00000461855 ATG3Q9NT62 314 aa13.64□□□□□ -0.23
SPTAN1-204ENST00000461855 STK32BQ9NY57 414 aa13.64□□□□□ -0.23
SPTAN1-204ENST00000461855 TMOD3Q9NYL9 352 aa13.64□□□□□ -0.23
SPTAN1-204ENST00000461855 HMGB2P26583 209 aaKnown RBP13.63□□□□□ -0.23
SPTAN1-204ENST00000461855 ZNF827Q17R98 1081 aa13.63□□□□□ -0.23
SPTAN1-204ENST00000461855 CCNL1Q9UK58 526 aaPredicted RBP13.63□□□□□ -0.23
SPTAN1-204ENST00000461855 ASAP1Q9ULH1 1129 aa13.63□□□□□ -0.23
SPTAN1-204ENST00000461855 LRP5O75197 1615 aa13.63□□□□□ -0.23
SPTAN1-204ENST00000461855 ADAMTS7Q9UKP4 1686 aa13.63□□□□□ -0.23
SPTAN1-204ENST00000461855 PHACTR3Q96KR7 559 aa13.62□□□□□ -0.23
SPTAN1-204ENST00000461855 CASZ1Q86V15 1759 aa13.61□□□□□ -0.23
SPTAN1-204ENST00000461855 ZNF316A6NFI3 1004 aaPredicted RBP13.61□□□□□ -0.23
SPTAN1-204ENST00000461855 RNMTO43148 476 aaKnown RBP13.61□□□□□ -0.23
SPTAN1-204ENST00000461855 KCNQ4P56696 695 aa13.61□□□□□ -0.23
SPTAN1-204ENST00000461855 GAS2L2Q8NHY3 880 aa13.61□□□□□ -0.23
SPTAN1-204ENST00000461855 PDGFDQ9GZP0 370 aaPredicted RBP13.61□□□□□ -0.23
SPTAN1-204ENST00000461855 LGR6Q9HBX8 967 aa13.61□□□□□ -0.23
SPTAN1-204ENST00000461855 MYBBP1AQ9BQG0 1328 aaKnown RBP13.61□□□□□ -0.23
SPTAN1-204ENST00000461855 MRC1P22897 1456 aa13.61□□□□□ -0.23
SPTAN1-204ENST00000461855 LOC102724428A0A0B4J2F2 783 aa13.6□□□□□ -0.23
SPTAN1-204ENST00000461855 U2AF1L5P0DN76 240 aaPredicted RBP13.6□□□□□ -0.23
SPTAN1-204ENST00000461855 PRKAR2BP31323 418 aa13.6□□□□□ -0.23
SPTAN1-204ENST00000461855 SIK1P57059 783 aa13.6□□□□□ -0.23
SPTAN1-204ENST00000461855 CABP4P57796 275 aa13.6□□□□□ -0.23
SPTAN1-204ENST00000461855 U2AF1Q01081 240 aaKnown RBP eCLIP13.6□□□□□ -0.23
SPTAN1-204ENST00000461855 NFATC2IPQ8NCF5 419 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms