RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 AAMPQ13685 434 aa5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 DDX19BQ9UMR2 479 aa5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 RNF123Q5XPI4 1314 aa5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 TNS3Q68CZ2 1445 aa5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 NUTM2BA6NNL0 878 aaPredicted RBP5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 NUTM2EB1AL46 878 aaPredicted RBP5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 HSP90AB1P08238 724 aaKnown RBP5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 TAF7Q15545 349 aaPredicted RBP5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 ALDH1L2Q3SY69 923 aa5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 NBPF6Q5VWK0 638 aa5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 ATF7IPQ6VMQ6 1270 aa5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 NUTM2AQ8IVF1 878 aaPredicted RBP5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 TRMT2AQ8IZ69 625 aaKnown RBP5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 TTC5Q8N0Z6 440 aa5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 NBPF4Q96M43 638 aa5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 RWDD1Q9H446 243 aaPredicted RBP5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 MAP3K5Q99683 1374 aa5.22□□□□□ -1.57
ATP13A3-206ENST00000461660 C20orf194Q5TEA3 1177 aa5.21□□□□□ -1.58
ATP13A3-206ENST00000461660 SLC4A10Q6U841 1118 aa5.21□□□□□ -1.58
ATP13A3-206ENST00000461660 ERICH6Q7L0X2 663 aa5.21□□□□□ -1.58
ATP13A3-206ENST00000461660 COL3A1P02461 1466 aaPredicted RBP5.21□□□□□ -1.58
ATP13A3-206ENST00000461660 LRRC7Q96NW7 1537 aa5.21□□□□□ -1.58
ATP13A3-206ENST00000461660 EIF2S2P20042 333 aaKnown RBP5.21□□□□□ -1.58
ATP13A3-206ENST00000461660 CCDC30Q5VVM6 783 aa5.21□□□□□ -1.58
ATP13A3-206ENST00000461660 CENPQQ7L2Z9 268 aaPredicted RBP5.21□□□□□ -1.58
ATP13A3-206ENST00000461660 NECTIN2Q92692 538 aa5.21□□□□□ -1.58
ATP13A3-206ENST00000461660 MIS18AQ9NYP9 233 aa5.21□□□□□ -1.58
ATP13A3-206ENST00000461660 NOB1Q9ULX3 412 aaKnown RBP5.21□□□□□ -1.58
ATP13A3-206ENST00000461660 KIAA0232Q92628 1395 aa5.21□□□□□ -1.58
ATP13A3-206ENST00000461660 FMN2Q9NZ56 1722 aa5.21□□□□□ -1.58
ATP13A3-206ENST00000461660 ADAMTS2O95450 1211 aa5.2□□□□□ -1.58
ATP13A3-206ENST00000461660 RGS3P49796 1198 aa5.2□□□□□ -1.58
ATP13A3-206ENST00000461660 AKAP4Q5JQC9 854 aa5.2□□□□□ -1.58
ATP13A3-206ENST00000461660 MPRIPQ6WCQ1 1025 aa5.2□□□□□ -1.58
ATP13A3-206ENST00000461660 FKBP5Q13451 457 aaPredicted RBP5.2□□□□□ -1.58
ATP13A3-206ENST00000461660 HDGFL1Q5TGJ6 251 aa5.2□□□□□ -1.58
ATP13A3-206ENST00000461660 CHD2O14647 1828 aaKnown RBP5.2□□□□□ -1.58
ATP13A3-206ENST00000461660 USP19O94966 1318 aa5.2□□□□□ -1.58
ATP13A3-206ENST00000461660 MON2Q7Z3U7 1717 aa5.2□□□□□ -1.58
ATP13A3-206ENST00000461660 BTBD11A6QL63 1104 aa5.2□□□□□ -1.58
ATP13A3-206ENST00000461660 IFNL2Q8IZJ0 200 aa5.2□□□□□ -1.58
ATP13A3-206ENST00000461660 DDX54Q8TDD1 881 aaKnown RBP5.2□□□□□ -1.58
ATP13A3-206ENST00000461660 NWD1Q149M9 1564 aa5.2□□□□□ -1.58
ATP13A3-206ENST00000461660 ERBB3P21860 1342 aa5.2□□□□□ -1.58
ATP13A3-206ENST00000461660 IQSEC2Q5JU85 1478 aa5.2□□□□□ -1.58
ATP13A3-206ENST00000461660 CABP4P57796 275 aa5.19□□□□□ -1.58
ATP13A3-206ENST00000461660 MVPQ14764 893 aaKnown RBP5.19□□□□□ -1.58
ATP13A3-206ENST00000461660 DAXXQ9UER7 740 aaPredicted RBP5.19□□□□□ -1.58
ATP13A3-206ENST00000461660 CHL1O00533 1208 aa5.19□□□□□ -1.58
ATP13A3-206ENST00000461660 SLC4A2P04920 1241 aa5.19□□□□□ -1.58
ATP13A3-206ENST00000461660 C8orf58Q8NAV2 365 aa5.19□□□□□ -1.58
ATP13A3-206ENST00000461660 ARXQ96QS3 562 aa5.19□□□□□ -1.58
ATP13A3-206ENST00000461660 NALCNQ8IZF0 1738 aa5.19□□□□□ -1.58
ATP13A3-206ENST00000461660 ANKRD26Q9UPS8 1709 aa5.19□□□□□ -1.58
ATP13A3-206ENST00000461660 VAMP4O75379 141 aa5.19□□□□□ -1.58
ATP13A3-206ENST00000461660 TRIM27P14373 513 aa5.19□□□□□ -1.58
ATP13A3-206ENST00000461660 MEX3CQ5U5Q3 659 aaKnown RBP5.19□□□□□ -1.58
ATP13A3-206ENST00000461660 ANP32AP39687 249 aaKnown RBP5.18□□□□□ -1.58
ATP13A3-206ENST00000461660 TSPYL6Q8N831 410 aa5.18□□□□□ -1.58
ATP13A3-206ENST00000461660 KDRP35968 1356 aa5.18□□□□□ -1.58
ATP13A3-206ENST00000461660 AKAP12Q02952 1782 aa5.18□□□□□ -1.58
ATP13A3-206ENST00000461660 HMMRO75330 724 aa5.18□□□□□ -1.58
ATP13A3-206ENST00000461660 DDX58O95786 925 aaKnown RBP5.18□□□□□ -1.58
ATP13A3-206ENST00000461660 IL2RBP14784 551 aa5.18□□□□□ -1.58
ATP13A3-206ENST00000461660 TMEM57Q8N5G2 664 aa5.18□□□□□ -1.58
ATP13A3-206ENST00000461660 ZCRB1Q8TBF4 217 aaKnown RBP5.18□□□□□ -1.58
ATP13A3-206ENST00000461660 BABAM1Q9NWV8 329 aa5.18□□□□□ -1.58
ATP13A3-206ENST00000461660 SOS2Q07890 1332 aaPredicted RBP5.18□□□□□ -1.58
ATP13A3-206ENST00000461660 KIF1AQ12756 1690 aa5.18□□□□□ -1.58
ATP13A3-206ENST00000461660 TOPAZ1Q8N9V7 1692 aa5.18□□□□□ -1.58
ATP13A3-206ENST00000461660 UPF2Q9HAU5 1272 aaKnown RBP5.18□□□□□ -1.58
ATP13A3-206ENST00000461660 BTG4Q9NY30 223 aa5.18□□□□□ -1.58
ATP13A3-206ENST00000461660 HDAC5Q9UQL6 1122 aa5.18□□□□□ -1.58
ATP13A3-206ENST00000461660 RNMTO43148 476 aaKnown RBP5.17□□□□□ -1.58
ATP13A3-206ENST00000461660 KRT24Q2M2I5 525 aa5.17□□□□□ -1.58
ATP13A3-206ENST00000461660 ARHGAP45Q92619 1136 aa5.17□□□□□ -1.58
ATP13A3-206ENST00000461660 SYTL4Q96C24 671 aaPredicted RBP5.17□□□□□ -1.58
ATP13A3-206ENST00000461660 AXIN2Q9Y2T1 843 aa5.17□□□□□ -1.58
ATP13A3-206ENST00000461660 MAP2P11137 1827 aaKnown RBP5.17□□□□□ -1.58
ATP13A3-206ENST00000461660 ZNF853P0CG23 659 aa5.17□□□□□ -1.58
ATP13A3-206ENST00000461660 MRPL50Q8N5N7 158 aaKnown RBP5.17□□□□□ -1.58
ATP13A3-206ENST00000461660 IL17REQ8NFR9 667 aa5.17□□□□□ -1.58
ATP13A3-206ENST00000461660 ZNF330Q9Y3S2 320 aaPredicted RBP5.17□□□□□ -1.58
ATP13A3-206ENST00000461660 SOS1Q07889 1333 aaPredicted RBP5.17□□□□□ -1.58
ATP13A3-206ENST00000461660 WDR17Q8IZU2 1322 aa5.17□□□□□ -1.58
ATP13A3-206ENST00000461660 PTPRCP08575 1304 aa5.17□□□□□ -1.58
ATP13A3-206ENST00000461660 CCT4P50991 539 aaKnown RBP5.17□□□□□ -1.58
ATP13A3-206ENST00000461660 MAPK8IP2Q13387 824 aaPredicted RBP5.17□□□□□ -1.58
ATP13A3-206ENST00000461660 NGLY1Q96IV0 654 aa5.17□□□□□ -1.58
ATP13A3-206ENST00000461660 DCAF5Q96JK2 942 aa5.17□□□□□ -1.58
ATP13A3-206ENST00000461660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.17□□□□□ -1.58
ATP13A3-206ENST00000461660 SHPRHQ149N8 1683 aa5.16□□□□□ -1.58
ATP13A3-206ENST00000461660 PCDH11XQ9BZA7 1347 aa5.16□□□□□ -1.58
ATP13A3-206ENST00000461660 PCDH11YQ9BZA8 1340 aa5.16□□□□□ -1.58
ATP13A3-206ENST00000461660 NEXNQ0ZGT2 675 aa5.16□□□□□ -1.58
ATP13A3-206ENST00000461660 LGR6Q9HBX8 967 aa5.16□□□□□ -1.58
ATP13A3-206ENST00000461660 EXOC5O00471 708 aa5.16□□□□□ -1.58
ATP13A3-206ENST00000461660 GNAI3P08754 354 aa5.16□□□□□ -1.58
ATP13A3-206ENST00000461660 RLBP1P12271 317 aa5.16□□□□□ -1.58
ATP13A3-206ENST00000461660 CARD10Q9BWT7 1032 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms