RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 NFAT5O94916 1531 aa8.75□□□□□ -1.01
MSH2-204ENST00000461394 RGPD2P0DJD1 1756 aa8.74□□□□□ -1.01
MSH2-204ENST00000461394 CT47B1P0C2W7 299 aaPredicted RBP8.74□□□□□ -1.01
MSH2-204ENST00000461394 RARSP54136 660 aaKnown RBP8.74□□□□□ -1.01
MSH2-204ENST00000461394 RTF1Q92541 710 aaKnown RBP8.74□□□□□ -1.01
MSH2-204ENST00000461394 EYA1Q99502 592 aa8.74□□□□□ -1.01
MSH2-204ENST00000461394 ALS2Q96Q42 1657 aa8.74□□□□□ -1.01
MSH2-204ENST00000461394 RGPD5Q99666 1765 aa8.73□□□□□ -1.01
MSH2-204ENST00000461394 DCTN1Q14203 1278 aa8.73□□□□□ -1.01
MSH2-204ENST00000461394 TMEM132AQ24JP5 1023 aa8.73□□□□□ -1.01
MSH2-204ENST00000461394 IP6K1Q92551 441 aa8.73□□□□□ -1.01
MSH2-204ENST00000461394 IFT57Q9NWB7 429 aa8.73□□□□□ -1.01
MSH2-204ENST00000461394 NPHP3Q7Z494 1330 aa8.73□□□□□ -1.01
MSH2-204ENST00000461394 ZNF335Q9H4Z2 1342 aaPredicted RBP8.73□□□□□ -1.01
MSH2-204ENST00000461394 PHRF1Q9P1Y6 1649 aaKnown RBP8.72□□□□□ -1.01
MSH2-204ENST00000461394 SLIT3O75094 1523 aa8.72□□□□□ -1.01
MSH2-204ENST00000461394 FAM83GA6ND36 823 aa8.72□□□□□ -1.01
MSH2-204ENST00000461394 GCP02774 474 aa8.72□□□□□ -1.01
MSH2-204ENST00000461394 MS4A1P11836 297 aa8.72□□□□□ -1.01
MSH2-204ENST00000461394 FTSJ3Q8IY81 847 aaKnown RBP8.72□□□□□ -1.01
MSH2-204ENST00000461394 USHBP1Q8N6Y0 703 aa8.72□□□□□ -1.01
MSH2-204ENST00000461394 GAS2L2Q8NHY3 880 aa8.72□□□□□ -1.01
MSH2-204ENST00000461394 DDX17Q92841 729 aaKnown RBP8.72□□□□□ -1.01
MSH2-204ENST00000461394 CIZ1Q9ULV3 898 aaPredicted RBP8.72□□□□□ -1.01
MSH2-204ENST00000461394 IGSF1Q8N6C5 1336 aa8.72□□□□□ -1.01
MSH2-204ENST00000461394 ZKSCAN2Q63HK3 967 aa8.71□□□□□ -1.02
MSH2-204ENST00000461394 MCM10Q7L590 875 aa8.71□□□□□ -1.02
MSH2-204ENST00000461394 PANK1Q8TE04 598 aa8.71□□□□□ -1.02
MSH2-204ENST00000461394 TNS3Q68CZ2 1445 aa8.71□□□□□ -1.02
MSH2-204ENST00000461394 ELL2O00472 640 aaPredicted RBP8.7□□□□□ -1.02
MSH2-204ENST00000461394 ZC3H6P61129 1189 aaKnown RBP8.7□□□□□ -1.02
MSH2-204ENST00000461394 PDE3AQ14432 1141 aa8.7□□□□□ -1.02
MSH2-204ENST00000461394 MTHFSDQ2M296 383 aaKnown RBP8.7□□□□□ -1.02
MSH2-204ENST00000461394 HS6ST3Q8IZP7 471 aa8.7□□□□□ -1.02
MSH2-204ENST00000461394 CLUAP1Q96AJ1 413 aa8.7□□□□□ -1.02
MSH2-204ENST00000461394 MBIPQ9NS73 344 aa8.7□□□□□ -1.02
MSH2-204ENST00000461394 ZBTB47Q9UFB7 747 aaPredicted RBP8.7□□□□□ -1.02
MSH2-204ENST00000461394 COG6Q9Y2V7 657 aa8.7□□□□□ -1.02
MSH2-204ENST00000461394 IPO8O15397 1037 aaKnown RBP8.69□□□□□ -1.02
MSH2-204ENST00000461394 CSB-PGBD3P0DP91 1061 aa8.69□□□□□ -1.02
MSH2-204ENST00000461394 ANKRD24Q8TF21 1146 aa8.69□□□□□ -1.02
MSH2-204ENST00000461394 SSH1Q8WYL5 1049 aa8.69□□□□□ -1.02
MSH2-204ENST00000461394 USP19O94966 1318 aa8.69□□□□□ -1.02
MSH2-204ENST00000461394 KIF16BQ96L93 1317 aa8.69□□□□□ -1.02
MSH2-204ENST00000461394 KDRP35968 1356 aa8.69□□□□□ -1.02
MSH2-204ENST00000461394 MED1Q15648 1581 aaPredicted RBP8.69□□□□□ -1.02
MSH2-204ENST00000461394 VIRMAQ69YN4 1812 aaKnown RBP8.68□□□□□ -1.02
MSH2-204ENST00000461394 GNAT3A8MTJ3 354 aa8.68□□□□□ -1.02
MSH2-204ENST00000461394 TWISTNBQ3B726 338 aaPredicted RBP8.68□□□□□ -1.02
MSH2-204ENST00000461394 ALDH1L2Q3SY69 923 aa8.68□□□□□ -1.02
MSH2-204ENST00000461394 ARHGEF25Q86VW2 580 aa8.68□□□□□ -1.02
MSH2-204ENST00000461394 HOMEZQ8IX15 550 aa8.68□□□□□ -1.02
MSH2-204ENST00000461394 DZIP1LQ8IYY4 767 aaKnown RBP8.68□□□□□ -1.02
MSH2-204ENST00000461394 LRRC59Q96AG4 307 aaKnown RBP8.68□□□□□ -1.02
MSH2-204ENST00000461394 NOB1Q9ULX3 412 aaKnown RBP8.68□□□□□ -1.02
MSH2-204ENST00000461394 MAP3K5Q99683 1374 aa8.68□□□□□ -1.02
MSH2-204ENST00000461394 TCERG1O14776 1098 aaKnown RBP8.67□□□□□ -1.02
MSH2-204ENST00000461394 PLEKHO1Q53GL0 409 aaPredicted RBP8.67□□□□□ -1.02
MSH2-204ENST00000461394 NBPF6Q5VWK0 638 aa8.67□□□□□ -1.02
MSH2-204ENST00000461394 BRINP3Q76B58 766 aa8.67□□□□□ -1.02
MSH2-204ENST00000461394 ITPRIPQ8IWB1 547 aa8.67□□□□□ -1.02
MSH2-204ENST00000461394 CABLES1Q8TDN4 633 aa8.67□□□□□ -1.02
MSH2-204ENST00000461394 PXDNQ92626 1479 aa8.67□□□□□ -1.02
MSH2-204ENST00000461394 ZNF428Q96B54 188 aa8.67□□□□□ -1.02
MSH2-204ENST00000461394 NBPF4Q96M43 638 aa8.67□□□□□ -1.02
MSH2-204ENST00000461394 SLAIN2Q9P270 581 aa8.67□□□□□ -1.02
MSH2-204ENST00000461394 TSPYL4Q9UJ04 414 aa8.67□□□□□ -1.02
MSH2-204ENST00000461394 TNNQ9UQP3 1299 aa8.67□□□□□ -1.02
MSH2-204ENST00000461394 FAM208AQ9UK61 1670 aaKnown RBP8.66□□□□□ -1.02
MSH2-204ENST00000461394 SPATA31A3Q5VYP0 1347 aa8.66□□□□□ -1.02
MSH2-204ENST00000461394 HTATSF1O43719 755 aaKnown RBP8.66□□□□□ -1.02
MSH2-204ENST00000461394 ZNF853P0CG23 659 aa8.66□□□□□ -1.02
MSH2-204ENST00000461394 C1orf141Q5JVX7 400 aa8.66□□□□□ -1.02
MSH2-204ENST00000461394 ZNF530Q6P9A1 599 aaPredicted RBP8.66□□□□□ -1.02
MSH2-204ENST00000461394 ATF7IPQ6VMQ6 1270 aa8.66□□□□□ -1.02
MSH2-204ENST00000461394 CENPQQ7L2Z9 268 aaPredicted RBP8.66□□□□□ -1.02
MSH2-204ENST00000461394 TSPYL6Q8N831 410 aa8.66□□□□□ -1.02
MSH2-204ENST00000461394 NLRP2Q9NX02 1062 aa8.66□□□□□ -1.02
MSH2-204ENST00000461394 CRYBG1Q9Y4K1 1723 aa8.66□□□□□ -1.02
MSH2-204ENST00000461394 LMO7Q8WWI1 1683 aa8.65□□□□□ -1.02
MSH2-204ENST00000461394 LRRC37A3O60309 1634 aa8.65□□□□□ -1.02
MSH2-204ENST00000461394 VAMP4O75379 141 aa8.65□□□□□ -1.02
MSH2-204ENST00000461394 MVPQ14764 893 aaKnown RBP8.65□□□□□ -1.02
MSH2-204ENST00000461394 CHRNA2Q15822 529 aa8.65□□□□□ -1.02
MSH2-204ENST00000461394 C8orf58Q8NAV2 365 aa8.65□□□□□ -1.02
MSH2-204ENST00000461394 MIS18AQ9NYP9 233 aa8.65□□□□□ -1.02
MSH2-204ENST00000461394 NHSL1Q5SYE7 1610 aa8.65□□□□□ -1.03
MSH2-204ENST00000461394 CRB1P82279 1406 aa8.64□□□□□ -1.03
MSH2-204ENST00000461394 CHL1O00533 1208 aa8.64□□□□□ -1.03
MSH2-204ENST00000461394 CAPN15O75808 1086 aa8.64□□□□□ -1.03
MSH2-204ENST00000461394 RLBP1P12271 317 aa8.64□□□□□ -1.03
MSH2-204ENST00000461394 TRIM27P14373 513 aa8.64□□□□□ -1.03
MSH2-204ENST00000461394 AAMPQ13685 434 aa8.64□□□□□ -1.03
MSH2-204ENST00000461394 AMOTQ4VCS5 1084 aa8.64□□□□□ -1.03
MSH2-204ENST00000461394 MRPL50Q8N5N7 158 aaKnown RBP8.64□□□□□ -1.03
MSH2-204ENST00000461394 RAPGEF4Q8WZA2 1011 aa8.64□□□□□ -1.03
MSH2-204ENST00000461394 DDX19BQ9UMR2 479 aa8.64□□□□□ -1.03
MSH2-204ENST00000461394 CAMTA1Q9Y6Y1 1673 aa8.64□□□□□ -1.03
MSH2-204ENST00000461394 COL18A1P39060 1754 aa8.63□□□□□ -1.03
MSH2-204ENST00000461394 ABCA3Q99758 1704 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms