RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 IP6K1Q92551 441 aa25.67■■□□□ 1.7
CCM2-203ENST00000461377 HTATSF1O43719 755 aaKnown RBP25.67■■□□□ 1.7
CCM2-203ENST00000461377 KCNH5Q8NCM2 988 aa25.67■■□□□ 1.7
CCM2-203ENST00000461377 API5Q9BZZ5 524 aaKnown RBP25.66■■□□□ 1.7
CCM2-203ENST00000461377 LRRC37A3O60309 1634 aa25.66■■□□□ 1.7
CCM2-203ENST00000461377 PHRF1Q9P1Y6 1649 aaKnown RBP25.66■■□□□ 1.7
CCM2-203ENST00000461377 CHMP4BQ9H444 224 aaKnown RBP25.65■■□□□ 1.7
CCM2-203ENST00000461377 MYT1Q01538 1121 aa25.65■■□□□ 1.7
CCM2-203ENST00000461377 ZBTB7BO15156 539 aaPredicted RBP25.64■■□□□ 1.7
CCM2-203ENST00000461377 KRT24Q2M2I5 525 aa25.64■■□□□ 1.7
CCM2-203ENST00000461377 SLIT3O75094 1523 aa25.64■■□□□ 1.69
CCM2-203ENST00000461377 C1orf167Q5SNV9 1468 aa25.64■■□□□ 1.69
CCM2-203ENST00000461377 LTV1Q96GA3 475 aaPredicted RBP25.64■■□□□ 1.69
CCM2-203ENST00000461377 ZBTB47Q9UFB7 747 aaPredicted RBP25.63■■□□□ 1.69
CCM2-203ENST00000461377 KIF1AQ12756 1690 aa25.63■■□□□ 1.69
CCM2-203ENST00000461377 SMC5Q8IY18 1101 aa25.62■■□□□ 1.69
CCM2-203ENST00000461377 VIRMAQ69YN4 1812 aaKnown RBP25.62■■□□□ 1.69
CCM2-203ENST00000461377 C19orf44Q9H6X5 657 aa25.62■■□□□ 1.69
CCM2-203ENST00000461377 TRPM3Q9HCF6 1732 aaPredicted RBP25.61■■□□□ 1.69
CCM2-203ENST00000461377 MSH6P52701 1360 aa25.6■■□□□ 1.69
CCM2-203ENST00000461377 GNAT3A8MTJ3 354 aa25.6■■□□□ 1.69
CCM2-203ENST00000461377 TSPYL4Q9UJ04 414 aa25.6■■□□□ 1.69
CCM2-203ENST00000461377 MAP3K5Q99683 1374 aa25.59■■□□□ 1.69
CCM2-203ENST00000461377 XPCQ01831 940 aaPredicted RBP25.58■■□□□ 1.69
CCM2-203ENST00000461377 MIS18AQ9NYP9 233 aa25.58■■□□□ 1.69
CCM2-203ENST00000461377 RGS12O14924 1447 aa25.58■■□□□ 1.68
CCM2-203ENST00000461377 USP19O94966 1318 aa25.58■■□□□ 1.68
CCM2-203ENST00000461377 MST1RQ04912 1400 aa25.57■■□□□ 1.68
CCM2-203ENST00000461377 USHBP1Q8N6Y0 703 aa25.56■■□□□ 1.68
CCM2-203ENST00000461377 GCP02774 474 aa25.56■■□□□ 1.68
CCM2-203ENST00000461377 KRT28Q7Z3Y7 464 aa25.56■■□□□ 1.68
CCM2-203ENST00000461377 DDRGK1Q96HY6 314 aa25.56■■□□□ 1.68
CCM2-203ENST00000461377 NCOA3Q9Y6Q9 1424 aa25.55■■□□□ 1.68
CCM2-203ENST00000461377 NBPF6Q5VWK0 638 aa25.55■■□□□ 1.68
CCM2-203ENST00000461377 ARHGEF25Q86VW2 580 aa25.55■■□□□ 1.68
CCM2-203ENST00000461377 NBPF4Q96M43 638 aa25.55■■□□□ 1.68
CCM2-203ENST00000461377 PTPRCP08575 1304 aa25.54■■□□□ 1.68
CCM2-203ENST00000461377 DCCP43146 1447 aa25.54■■□□□ 1.68
CCM2-203ENST00000461377 INTS3Q68E01 1043 aaKnown RBP25.54■■□□□ 1.68
CCM2-203ENST00000461377 TMEM94Q12767 1356 aa25.54■■□□□ 1.68
CCM2-203ENST00000461377 STRCP1A6NGW2 1772 aa25.53■■□□□ 1.68
CCM2-203ENST00000461377 IL17REQ8NFR9 667 aa25.53■■□□□ 1.68
CCM2-203ENST00000461377 BABAM1Q9NWV8 329 aa25.53■■□□□ 1.68
CCM2-203ENST00000461377 NCAPD2Q15021 1401 aa25.51■■□□□ 1.67
CCM2-203ENST00000461377 ZBTB7CA1YPR0 619 aa25.51■■□□□ 1.67
CCM2-203ENST00000461377 NUCB1Q02818 461 aa25.51■■□□□ 1.67
CCM2-203ENST00000461377 C1orf115Q9H7X2 142 aa25.5■■□□□ 1.67
CCM2-203ENST00000461377 ATF3P18847 181 aa25.49■■□□□ 1.67
CCM2-203ENST00000461377 ALS2Q96Q42 1657 aa25.49■■□□□ 1.67
CCM2-203ENST00000461377 SLC4A2P04920 1241 aa25.48■■□□□ 1.67
CCM2-203ENST00000461377 TAF7Q15545 349 aaPredicted RBP25.48■■□□□ 1.67
CCM2-203ENST00000461377 LMOD2Q6P5Q4 547 aa25.48■■□□□ 1.67
CCM2-203ENST00000461377 SOS1Q07889 1333 aaPredicted RBP25.48■■□□□ 1.67
CCM2-203ENST00000461377 SIRT2Q8IXJ6 389 aa25.47■■□□□ 1.67
CCM2-203ENST00000461377 GCC1Q96CN9 775 aa25.47■■□□□ 1.67
CCM2-203ENST00000461377 CEMIPQ8WUJ3 1361 aa25.47■■□□□ 1.67
CCM2-203ENST00000461377 LRRC59Q96AG4 307 aaKnown RBP25.47■■□□□ 1.67
CCM2-203ENST00000461377 RGPD2P0DJD1 1756 aa25.47■■□□□ 1.67
CCM2-203ENST00000461377 SEC24BO95487 1268 aa25.46■■□□□ 1.67
CCM2-203ENST00000461377 MED1Q15648 1581 aaPredicted RBP25.46■■□□□ 1.67
CCM2-203ENST00000461377 CAMTA1Q9Y6Y1 1673 aa25.45■■□□□ 1.67
CCM2-203ENST00000461377 CHD1LQ86WJ1 897 aa25.44■■□□□ 1.66
CCM2-203ENST00000461377 ANKRD24Q8TF21 1146 aa25.44■■□□□ 1.66
CCM2-203ENST00000461377 FAM208AQ9UK61 1670 aaKnown RBP25.43■■□□□ 1.66
CCM2-203ENST00000461377 LMO7Q8WWI1 1683 aa25.43■■□□□ 1.66
CCM2-203ENST00000461377 HSPA2P54652 639 aa25.42■■□□□ 1.66
CCM2-203ENST00000461377 G2E3Q7L622 706 aa25.42■■□□□ 1.66
CCM2-203ENST00000461377 PLEKHG5O94827 1062 aa25.41■■□□□ 1.66
CCM2-203ENST00000461377 PLEKHO1Q53GL0 409 aaPredicted RBP25.41■■□□□ 1.66
CCM2-203ENST00000461377 CCDC30Q5VVM6 783 aa25.41■■□□□ 1.66
CCM2-203ENST00000461377 CADPS2Q86UW7 1296 aa25.41■■□□□ 1.66
CCM2-203ENST00000461377 STK31Q9BXU1 1019 aa25.41■■□□□ 1.66
CCM2-203ENST00000461377 LNPKQ9C0E8 428 aa25.4■■□□□ 1.66
CCM2-203ENST00000461377 ATP10DQ9P241 1426 aa25.4■■□□□ 1.66
CCM2-203ENST00000461377 AMOTQ4VCS5 1084 aa25.4■■□□□ 1.66
CCM2-203ENST00000461377 AKAP4Q5JQC9 854 aa25.4■■□□□ 1.66
CCM2-203ENST00000461377 AXIN2Q9Y2T1 843 aa25.4■■□□□ 1.66
CCM2-203ENST00000461377 ZNF530Q6P9A1 599 aaPredicted RBP25.38■■□□□ 1.65
CCM2-203ENST00000461377 LGR6Q9HBX8 967 aa25.38■■□□□ 1.65
CCM2-203ENST00000461377 ANKRD45Q5TZF3 282 aa25.37■■□□□ 1.65
CCM2-203ENST00000461377 ANKRD44Q8N8A2 993 aa25.37■■□□□ 1.65
CCM2-203ENST00000461377 CCT4P50991 539 aaKnown RBP25.36■■□□□ 1.65
CCM2-203ENST00000461377 NPHP3Q7Z494 1330 aa25.36■■□□□ 1.65
CCM2-203ENST00000461377 RPAP2Q8IXW5 612 aaPredicted RBP25.36■■□□□ 1.65
CCM2-203ENST00000461377 DDX17Q92841 729 aaKnown RBP25.36■■□□□ 1.65
CCM2-203ENST00000461377 PXDNQ92626 1479 aa25.36■■□□□ 1.65
CCM2-203ENST00000461377 OVOS2A0A0G2JMS6 1433 aa25.35■■□□□ 1.65
CCM2-203ENST00000461377 KDM3BQ7LBC6 1761 aa25.35■■□□□ 1.65
CCM2-203ENST00000461377 MEIS3Q99687 375 aa25.35■■□□□ 1.65
CCM2-203ENST00000461377 TNS3Q68CZ2 1445 aa25.35■■□□□ 1.65
CCM2-203ENST00000461377 ERBB3P21860 1342 aa25.35■■□□□ 1.65
CCM2-203ENST00000461377 FLIIQ13045 1269 aa25.35■■□□□ 1.65
CCM2-203ENST00000461377 CEP85Q6P2H3 762 aa25.34■■□□□ 1.65
CCM2-203ENST00000461377 DCTPP1Q9H773 170 aa25.34■■□□□ 1.65
CCM2-203ENST00000461377 UPF2Q9HAU5 1272 aaKnown RBP25.34■■□□□ 1.65
CCM2-203ENST00000461377 LMTK3Q96Q04 1460 aa25.33■■□□□ 1.65
CCM2-203ENST00000461377 F6X3S4 739 aa25.33■■□□□ 1.65
CCM2-203ENST00000461377 ZC3H6P61129 1189 aaKnown RBP25.33■■□□□ 1.65
CCM2-203ENST00000461377 EIF4A1P60842 406 aaKnown RBP25.32■■□□□ 1.64
CCM2-203ENST00000461377 TBC1D32Q96NH3 1257 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms