RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 HDAC5Q9UQL6 1122 aa17.43■□□□□ 0.38
NCL-207ENST00000461347 CD109Q6YHK3 1445 aa17.42■□□□□ 0.38
NCL-207ENST00000461347 GLI2P10070 1586 aa17.42■□□□□ 0.38
NCL-207ENST00000461347 UNC13BO14795 1591 aa17.42■□□□□ 0.38
NCL-207ENST00000461347 SYNMO15061 1565 aa17.42■□□□□ 0.38
NCL-207ENST00000461347 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.42■□□□□ 0.38
NCL-207ENST00000461347 BCL11BQ9C0K0 894 aaPredicted RBP17.42■□□□□ 0.38
NCL-207ENST00000461347 INO80Q9ULG1 1556 aaPredicted RBP17.42■□□□□ 0.38
NCL-207ENST00000461347 H3BQV1 296 aa17.41■□□□□ 0.38
NCL-207ENST00000461347 MX1P20591 662 aa17.41■□□□□ 0.38
NCL-207ENST00000461347 IFFO2Q5TF58 517 aa17.41■□□□□ 0.38
NCL-207ENST00000461347 PLEKHM2Q8IWE5 1019 aa17.41■□□□□ 0.38
NCL-207ENST00000461347 CNTROBQ8N137 903 aa17.41■□□□□ 0.38
NCL-207ENST00000461347 BICD2Q8TD16 824 aa17.41■□□□□ 0.38
NCL-207ENST00000461347 HDGFL1Q5TGJ6 251 aa17.41■□□□□ 0.38
NCL-207ENST00000461347 ZNF692Q9BU19 519 aaPredicted RBP17.41■□□□□ 0.38
NCL-207ENST00000461347 NUTM1Q86Y26 1132 aa17.41■□□□□ 0.38
NCL-207ENST00000461347 SPC24Q8NBT2 197 aa17.41■□□□□ 0.38
NCL-207ENST00000461347 KDM5AP29375 1690 aaKnown RBP17.41■□□□□ 0.38
NCL-207ENST00000461347 OTUD7AQ8TE49 926 aaPredicted RBP17.4■□□□□ 0.38
NCL-207ENST00000461347 ZNF592Q92610 1267 aa17.4■□□□□ 0.38
NCL-207ENST00000461347 LARP6Q9BRS8 491 aaKnown RBP17.4■□□□□ 0.38
NCL-207ENST00000461347 DEPDC5O75140 1603 aa17.4■□□□□ 0.38
NCL-207ENST00000461347 PRIM1P49642 420 aaKnown RBP17.4■□□□□ 0.38
NCL-207ENST00000461347 CLASRPQ8N2M8 674 aaKnown RBP17.4■□□□□ 0.38
NCL-207ENST00000461347 FAM69CQ0P6D2 419 aa17.39■□□□□ 0.38
NCL-207ENST00000461347 GAS2L3Q86XJ1 694 aa17.39■□□□□ 0.38
NCL-207ENST00000461347 ANKRD44Q8N8A2 993 aa17.39■□□□□ 0.38
NCL-207ENST00000461347 FAM184AQ8NB25 1140 aa17.39■□□□□ 0.37
NCL-207ENST00000461347 PPRC1Q5VV67 1664 aaKnown RBP17.39■□□□□ 0.37
NCL-207ENST00000461347 GOLGA6L19H0YKK7 550 aa17.39■□□□□ 0.37
NCL-207ENST00000461347 CFAP74Q9C0B2 1584 aa17.39■□□□□ 0.37
NCL-207ENST00000461347 AEBP1Q8IUX7 1158 aa17.38■□□□□ 0.37
NCL-207ENST00000461347 PUS7Q96PZ0 661 aaKnown RBP17.38■□□□□ 0.37
NCL-207ENST00000461347 DCTPP1Q9H773 170 aa17.38■□□□□ 0.37
NCL-207ENST00000461347 TMX3Q96JJ7 454 aa17.38■□□□□ 0.37
NCL-207ENST00000461347 FSD2A1L4K1 749 aa17.38■□□□□ 0.37
NCL-207ENST00000461347 HSP90AB4PQ58FF6 505 aa17.38■□□□□ 0.37
NCL-207ENST00000461347 CWC27Q6UX04 472 aaKnown RBP17.38■□□□□ 0.37
NCL-207ENST00000461347 A0A0G2JS52 829 aa17.38■□□□□ 0.37
NCL-207ENST00000461347 BECN2A8MW95 431 aa17.38■□□□□ 0.37
NCL-207ENST00000461347 SRGAP3O43295 1099 aa17.38■□□□□ 0.37
NCL-207ENST00000461347 UGGT1Q9NYU2 1555 aa17.37■□□□□ 0.37
NCL-207ENST00000461347 FOSBP53539 338 aa17.37■□□□□ 0.37
NCL-207ENST00000461347 WASLO00401 505 aaPredicted RBP17.37■□□□□ 0.37
NCL-207ENST00000461347 USP25Q9UHP3 1055 aa17.36■□□□□ 0.37
NCL-207ENST00000461347 G3BP1Q13283 466 aaKnown RBP eCLIP17.36■□□□□ 0.375e-8■■□□□ 12.4
NCL-207ENST00000461347 MTERF4Q7Z6M4 381 aaKnown RBP17.36■□□□□ 0.37
NCL-207ENST00000461347 DDX54Q8TDD1 881 aaKnown RBP17.36■□□□□ 0.37
NCL-207ENST00000461347 CD2BP2O95400 341 aaKnown RBP17.36■□□□□ 0.37
NCL-207ENST00000461347 USP26Q9BXU7 913 aa17.35■□□□□ 0.37
NCL-207ENST00000461347 SRCIN1Q9C0H9 1055 aa17.35■□□□□ 0.37
NCL-207ENST00000461347 SBNO2Q9Y2G9 1366 aa17.35■□□□□ 0.37
NCL-207ENST00000461347 AIMP1Q12904 312 aaKnown RBP17.35■□□□□ 0.37
NCL-207ENST00000461347 PDCL3Q9H2J4 239 aa17.35■□□□□ 0.37
NCL-207ENST00000461347 PDE1AP54750 535 aa17.35■□□□□ 0.37
NCL-207ENST00000461347 RNF20Q5VTR2 975 aa17.34■□□□□ 0.37
NCL-207ENST00000461347 LRRFIP2Q9Y608 721 aaKnown RBP17.34■□□□□ 0.37
NCL-207ENST00000461347 ZMYM3Q14202 1370 aa17.34■□□□□ 0.37
NCL-207ENST00000461347 FBXW7Q969H0 707 aa17.34■□□□□ 0.37
NCL-207ENST00000461347 HMGN5P82970 282 aaKnown RBP17.34■□□□□ 0.37
NCL-207ENST00000461347 SF3A1Q15459 793 aaKnown RBP17.34■□□□□ 0.37
NCL-207ENST00000461347 C1orf141Q5JVX7 400 aa17.34■□□□□ 0.37
NCL-207ENST00000461347 CEP85Q6P2H3 762 aa17.34■□□□□ 0.37
NCL-207ENST00000461347 ZNF330Q9Y3S2 320 aaPredicted RBP17.34■□□□□ 0.37
NCL-207ENST00000461347 LRSAM1Q6UWE0 723 aa17.33■□□□□ 0.37
NCL-207ENST00000461347 SLC26A8Q96RN1 970 aa17.33■□□□□ 0.37
NCL-207ENST00000461347 PTPRCP08575 1304 aa17.33■□□□□ 0.36
NCL-207ENST00000461347 SASS6Q6UVJ0 657 aa17.33■□□□□ 0.36
NCL-207ENST00000461347 FERMT3Q86UX7 667 aa17.33■□□□□ 0.36
NCL-207ENST00000461347 TRIM5Q9C035 493 aa17.33■□□□□ 0.36
NCL-207ENST00000461347 LETM1O95202 739 aaPredicted RBP17.32■□□□□ 0.36
NCL-207ENST00000461347 GNL2Q13823 731 aaKnown RBP17.32■□□□□ 0.36
NCL-207ENST00000461347 JAKMIP1Q96N16 626 aaKnown RBP17.32■□□□□ 0.36
NCL-207ENST00000461347 ATP7AQ04656 1500 aa17.32■□□□□ 0.36
NCL-207ENST00000461347 HSP90AB2PQ58FF8 381 aa17.32■□□□□ 0.36
NCL-207ENST00000461347 RBSNQ9H1K0 784 aa17.32■□□□□ 0.36
NCL-207ENST00000461347 ZNF518AQ6AHZ1 1483 aa17.32■□□□□ 0.36
NCL-207ENST00000461347 PLEKHF1Q96S99 279 aa17.32■□□□□ 0.36
NCL-207ENST00000461347 FSD1Q9BTV5 496 aa17.32■□□□□ 0.36
NCL-207ENST00000461347 CYP46A1Q9Y6A2 500 aa17.32■□□□□ 0.36
NCL-207ENST00000461347 ZFYVE16Q7Z3T8 1539 aa17.32■□□□□ 0.36
NCL-207ENST00000461347 CSB-PGBD3P0DP91 1061 aa17.31■□□□□ 0.36
NCL-207ENST00000461347 CASTP20810 708 aaKnown RBP17.31■□□□□ 0.36
NCL-207ENST00000461347 FLIIQ13045 1269 aa17.31■□□□□ 0.36
NCL-207ENST00000461347 CCDC83Q8IWF9 413 aa17.31■□□□□ 0.36
NCL-207ENST00000461347 NCKAP5LQ9HCH0 1330 aa17.31■□□□□ 0.36
NCL-207ENST00000461347 IQGAP3Q86VI3 1631 aa17.31■□□□□ 0.36
NCL-207ENST00000461347 KIF13AQ9H1H9 1805 aa17.31■□□□□ 0.36
NCL-207ENST00000461347 TRPM2O94759 1503 aa17.31■□□□□ 0.36
NCL-207ENST00000461347 GSPT1P15170 499 aaKnown RBP17.3■□□□□ 0.36
NCL-207ENST00000461347 STK3Q13188 491 aa17.3■□□□□ 0.36
NCL-207ENST00000461347 ASXL2Q76L83 1435 aa17.3■□□□□ 0.36
NCL-207ENST00000461347 NEXNQ0ZGT2 675 aa17.3■□□□□ 0.36
NCL-207ENST00000461347 PKP1Q13835 747 aa17.3■□□□□ 0.36
NCL-207ENST00000461347 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
NCL-207ENST00000461347 GORABQ5T7V8 394 aa17.3■□□□□ 0.36
NCL-207ENST00000461347 LARP1BQ659C4 914 aaKnown RBP17.3■□□□□ 0.36
NCL-207ENST00000461347 ABTB2Q8N961 1025 aa17.3■□□□□ 0.36
NCL-207ENST00000461347 KIF3AQ9Y496 699 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 264.4 ms