RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 FYB1O15117 783 aa12.31□□□□□ -0.44
SOX2-OT-202ENST00000461063 AMPHP49418 695 aa12.31□□□□□ -0.44
SOX2-OT-202ENST00000461063 SLC15A2Q16348 729 aa12.31□□□□□ -0.44
SOX2-OT-202ENST00000461063 STK32BQ9NY57 414 aa12.31□□□□□ -0.44
SOX2-OT-202ENST00000461063 NHSQ6T4R5 1651 aa12.31□□□□□ -0.44
SOX2-OT-202ENST00000461063 GGNBP2Q9H3C7 697 aa12.3□□□□□ -0.44
SOX2-OT-202ENST00000461063 CASZ1Q86V15 1759 aa12.29□□□□□ -0.44
SOX2-OT-202ENST00000461063 ZBTB7AO95365 584 aa12.29□□□□□ -0.44
SOX2-OT-202ENST00000461063 DDX54Q8TDD1 881 aaKnown RBP12.29□□□□□ -0.44
SOX2-OT-202ENST00000461063 RTL1A6NKG5 1358 aa12.29□□□□□ -0.44
SOX2-OT-202ENST00000461063 ATXN8OSP0DMR3 200 aa12.28□□□□□ -0.44
SOX2-OT-202ENST00000461063 PTGER2P43116 358 aa12.28□□□□□ -0.44
SOX2-OT-202ENST00000461063 RRS1Q15050 365 aaKnown RBP12.28□□□□□ -0.44
SOX2-OT-202ENST00000461063 CDCA8Q53HL2 280 aa12.28□□□□□ -0.44
SOX2-OT-202ENST00000461063 CHRDL2Q6WN34 429 aa12.28□□□□□ -0.44
SOX2-OT-202ENST00000461063 TIMELESSQ9UNS1 1208 aa12.28□□□□□ -0.44
SOX2-OT-202ENST00000461063 FAM208AQ9UK61 1670 aaKnown RBP12.27□□□□□ -0.45
SOX2-OT-202ENST00000461063 NBPF6Q5VWK0 638 aa12.26□□□□□ -0.45
SOX2-OT-202ENST00000461063 ZCRB1Q8TBF4 217 aaKnown RBP12.26□□□□□ -0.45
SOX2-OT-202ENST00000461063 NBPF4Q96M43 638 aa12.26□□□□□ -0.45
SOX2-OT-202ENST00000461063 CARD14Q9BXL6 1004 aa12.26□□□□□ -0.45
SOX2-OT-202ENST00000461063 LRRC4BQ9NT99 713 aa12.26□□□□□ -0.45
SOX2-OT-202ENST00000461063 MEGF6O75095 1541 aa12.26□□□□□ -0.45
SOX2-OT-202ENST00000461063 PRIM1P49642 420 aaKnown RBP12.25□□□□□ -0.45
SOX2-OT-202ENST00000461063 ZNF827Q17R98 1081 aa12.25□□□□□ -0.45
SOX2-OT-202ENST00000461063 PAPPAQ13219 1627 aa12.25□□□□□ -0.45
SOX2-OT-202ENST00000461063 BTAF1O14981 1849 aa12.25□□□□□ -0.45
SOX2-OT-202ENST00000461063 INSRP06213 1382 aa12.24□□□□□ -0.45
SOX2-OT-202ENST00000461063 HSP90AB2PQ58FF8 381 aa12.24□□□□□ -0.45
SOX2-OT-202ENST00000461063 USHBP1Q8N6Y0 703 aa12.24□□□□□ -0.45
SOX2-OT-202ENST00000461063 MTFR1LQ9H019 292 aa12.24□□□□□ -0.45
SOX2-OT-202ENST00000461063 CLSPNQ9HAW4 1339 aa12.24□□□□□ -0.45
SOX2-OT-202ENST00000461063 SMG6Q86US8 1419 aaKnown RBP12.23□□□□□ -0.45
SOX2-OT-202ENST00000461063 NSD2O96028 1365 aa12.23□□□□□ -0.45
SOX2-OT-202ENST00000461063 SLC27A3Q5K4L6 730 aa12.23□□□□□ -0.45
SOX2-OT-202ENST00000461063 SYTL4Q96C24 671 aaPredicted RBP12.23□□□□□ -0.45
SOX2-OT-202ENST00000461063 SGIP1Q9BQI5 828 aa12.23□□□□□ -0.45
SOX2-OT-202ENST00000461063 PCGF6Q9BYE7 350 aa12.23□□□□□ -0.45
SOX2-OT-202ENST00000461063 NSD3Q9BZ95 1437 aa12.22□□□□□ -0.45
SOX2-OT-202ENST00000461063 FLT4P35916 1363 aa12.22□□□□□ -0.45
SOX2-OT-202ENST00000461063 KIF24Q5T7B8 1368 aa12.22□□□□□ -0.45
SOX2-OT-202ENST00000461063 CGNL1Q0VF96 1302 aa12.22□□□□□ -0.45
SOX2-OT-202ENST00000461063 RAPGEF4Q8WZA2 1011 aa12.22□□□□□ -0.45
SOX2-OT-202ENST00000461063 AKT1S1Q96B36 256 aa12.22□□□□□ -0.45
SOX2-OT-202ENST00000461063 MYOM1P52179 1685 aa12.22□□□□□ -0.45
SOX2-OT-202ENST00000461063 TATP17735 454 aaPredicted RBP12.21□□□□□ -0.45
SOX2-OT-202ENST00000461063 YY1P25490 414 aa12.21□□□□□ -0.45
SOX2-OT-202ENST00000461063 KCNQ4P56696 695 aa12.21□□□□□ -0.45
SOX2-OT-202ENST00000461063 EMILIN1Q9Y6C2 1016 aa12.21□□□□□ -0.45
SOX2-OT-202ENST00000461063 UTRNP46939 3433 aa12.21□□□□□ -0.46
SOX2-OT-202ENST00000461063 RGPD2P0DJD1 1756 aa12.2□□□□□ -0.46
SOX2-OT-202ENST00000461063 SYT17Q9BSW7 474 aa12.2□□□□□ -0.46
SOX2-OT-202ENST00000461063 FHDC1Q9C0D6 1143 aaPredicted RBP12.2□□□□□ -0.46
SOX2-OT-202ENST00000461063 SHANK3Q9BYB0 1731 aa12.2□□□□□ -0.46
SOX2-OT-202ENST00000461063 KIF20BQ96Q89 1820 aa12.19□□□□□ -0.46
SOX2-OT-202ENST00000461063 ARXQ96QS3 562 aa12.19□□□□□ -0.46
SOX2-OT-202ENST00000461063 PNPLA7Q6ZV29 1317 aa12.18□□□□□ -0.46
SOX2-OT-202ENST00000461063 DOT1LQ8TEK3 1739 aa12.18□□□□□ -0.46
SOX2-OT-202ENST00000461063 SLC16A10Q8TF71 515 aa12.18□□□□□ -0.46
SOX2-OT-202ENST00000461063 TFCP2L1Q9NZI6 479 aa12.18□□□□□ -0.46
SOX2-OT-202ENST00000461063 PCDH11XQ9BZA7 1347 aa12.17□□□□□ -0.46
SOX2-OT-202ENST00000461063 PCDH11YQ9BZA8 1340 aa12.17□□□□□ -0.46
SOX2-OT-202ENST00000461063 PPM1GO15355 546 aaPredicted RBP12.17□□□□□ -0.46
SOX2-OT-202ENST00000461063 CYP27B1O15528 508 aa12.17□□□□□ -0.46
SOX2-OT-202ENST00000461063 CCNL1Q9UK58 526 aaPredicted RBP12.17□□□□□ -0.46
SOX2-OT-202ENST00000461063 WASHC2AQ641Q2 1341 aa12.16□□□□□ -0.46
SOX2-OT-202ENST00000461063 POLR3GLQ9BT43 218 aa12.16□□□□□ -0.46
SOX2-OT-202ENST00000461063 NCAPD2Q15021 1401 aa12.16□□□□□ -0.46
SOX2-OT-202ENST00000461063 MAP3K5Q99683 1374 aa12.16□□□□□ -0.46
SOX2-OT-202ENST00000461063 POLKQ9UBT6 870 aa12.15□□□□□ -0.46
SOX2-OT-202ENST00000461063 LY75O60449 1722 aa12.14□□□□□ -0.47
SOX2-OT-202ENST00000461063 KAT6BQ8WYB5 2073 aa12.14□□□□□ -0.47
SOX2-OT-202ENST00000461063 HSPA5P11021 654 aaKnown RBP12.14□□□□□ -0.47
SOX2-OT-202ENST00000461063 EIF4G2P78344 907 aaKnown RBP eCLIP12.14□□□□□ -0.47
SOX2-OT-202ENST00000461063 MPRIPQ6WCQ1 1025 aa12.14□□□□□ -0.47
SOX2-OT-202ENST00000461063 REM2Q8IYK8 340 aaPredicted RBP12.14□□□□□ -0.47
SOX2-OT-202ENST00000461063 EYA1Q99502 592 aa12.14□□□□□ -0.47
SOX2-OT-202ENST00000461063 POLD1P28340 1107 aa12.13□□□□□ -0.47
SOX2-OT-202ENST00000461063 QSER1Q2KHR3 1735 aa12.13□□□□□ -0.47
SOX2-OT-202ENST00000461063 PALLDQ8WX93 1383 aa12.13□□□□□ -0.47
SOX2-OT-202ENST00000461063 ANKRD26Q9UPS8 1709 aa12.12□□□□□ -0.47
SOX2-OT-202ENST00000461063 TNNT2P45379 298 aaPredicted RBP12.12□□□□□ -0.47
SOX2-OT-202ENST00000461063 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
SOX2-OT-202ENST00000461063 COL23A1Q86Y22 540 aaPredicted RBP12.12□□□□□ -0.47
SOX2-OT-202ENST00000461063 SPG7Q9UQ90 795 aa12.12□□□□□ -0.47
SOX2-OT-202ENST00000461063 GOLGB1Q14789 3259 aaKnown RBP12.12□□□□□ -0.47
SOX2-OT-202ENST00000461063 EIF4A2Q14240 407 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-202ENST00000461063 CCER1Q8TC90 406 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-202ENST00000461063 PIGBQ92521 554 aa12.11□□□□□ -0.47
SOX2-OT-202ENST00000461063 PANK3Q9H999 370 aa12.11□□□□□ -0.47
SOX2-OT-202ENST00000461063 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.11□□□□□ -0.47
SOX2-OT-202ENST00000461063 PKD1L3Q7Z443 1732 aa12.11□□□□□ -0.47
SOX2-OT-202ENST00000461063 TUBGCP6Q96RT7 1819 aa12.1□□□□□ -0.47
SOX2-OT-202ENST00000461063 KLHL34Q8N239 644 aa12.1□□□□□ -0.47
SOX2-OT-202ENST00000461063 SMARCC1Q92922 1105 aaPredicted RBP12.1□□□□□ -0.47
SOX2-OT-202ENST00000461063 COL24A1Q17RW2 1714 aa12.1□□□□□ -0.47
SOX2-OT-202ENST00000461063 TOGARAM1Q9Y4F4 1720 aa12.09□□□□□ -0.47
SOX2-OT-202ENST00000461063 PHKG2P15735 406 aa12.09□□□□□ -0.47
SOX2-OT-202ENST00000461063 HMGB2P26583 209 aaKnown RBP12.09□□□□□ -0.47
SOX2-OT-202ENST00000461063 GPR162Q16538 588 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms