RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 TBC1D12O60347 775 aa10.19□□□□□ -0.78
RTN4-212ENST00000461004 ADAMTS2O95450 1211 aa10.19□□□□□ -0.78
RTN4-212ENST00000461004 PTGER2P43116 358 aa10.19□□□□□ -0.78
RTN4-212ENST00000461004 PRIM1P49642 420 aaKnown RBP10.19□□□□□ -0.78
RTN4-212ENST00000461004 DOK7Q18PE1 504 aa10.19□□□□□ -0.78
RTN4-212ENST00000461004 POLR3GLQ9BT43 218 aa10.19□□□□□ -0.78
RTN4-212ENST00000461004 CD163L1Q9NR16 1453 aa10.18□□□□□ -0.78
RTN4-212ENST00000461004 TNS3Q68CZ2 1445 aa10.18□□□□□ -0.78
RTN4-212ENST00000461004 RBM26Q5T8P6 1007 aaKnown RBP10.18□□□□□ -0.78
RTN4-212ENST00000461004 DDX12PQ92771 950 aa10.18□□□□□ -0.78
RTN4-212ENST00000461004 PUS7Q96PZ0 661 aaKnown RBP10.18□□□□□ -0.78
RTN4-212ENST00000461004 RGS17Q9UGC6 210 aaPredicted RBP10.18□□□□□ -0.78
RTN4-212ENST00000461004 TRPM3Q9HCF6 1732 aaPredicted RBP10.18□□□□□ -0.78
RTN4-212ENST00000461004 MED1Q15648 1581 aaPredicted RBP10.18□□□□□ -0.78
RTN4-212ENST00000461004 USP6P35125 1406 aa10.17□□□□□ -0.78
RTN4-212ENST00000461004 CPSF1Q10570 1443 aaKnown RBP10.17□□□□□ -0.78
RTN4-212ENST00000461004 SSH2Q76I76 1423 aa10.17□□□□□ -0.78
RTN4-212ENST00000461004 SPATA31A6Q5VVP1 1343 aa10.17□□□□□ -0.78
RTN4-212ENST00000461004 ITSN1Q15811 1721 aa10.17□□□□□ -0.78
RTN4-212ENST00000461004 GRXCR2A6NFK2 248 aa10.17□□□□□ -0.78
RTN4-212ENST00000461004 SHPRHQ149N8 1683 aa10.17□□□□□ -0.78
RTN4-212ENST00000461004 TTC21BQ7Z4L5 1316 aa10.16□□□□□ -0.78
RTN4-212ENST00000461004 NUDT7P0C024 238 aa10.16□□□□□ -0.78
RTN4-212ENST00000461004 OSBPP22059 807 aa10.16□□□□□ -0.78
RTN4-212ENST00000461004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.16□□□□□ -0.78
RTN4-212ENST00000461004 ABTB2Q8N961 1025 aa10.16□□□□□ -0.78
RTN4-212ENST00000461004 A0A1W2PP64 1363 aa10.15□□□□□ -0.78
RTN4-212ENST00000461004 KTN1Q86UP2 1357 aaKnown RBP10.15□□□□□ -0.78
RTN4-212ENST00000461004 MEX3CQ5U5Q3 659 aaKnown RBP10.15□□□□□ -0.78
RTN4-212ENST00000461004 CARD14Q9BXL6 1004 aa10.15□□□□□ -0.78
RTN4-212ENST00000461004 ALS2Q96Q42 1657 aa10.15□□□□□ -0.79
RTN4-212ENST00000461004 NME9Q86XW9 330 aa10.14□□□□□ -0.79
RTN4-212ENST00000461004 C8orf37Q96NL8 207 aa10.14□□□□□ -0.79
RTN4-212ENST00000461004 COL22A1Q8NFW1 1626 aaPredicted RBP10.14□□□□□ -0.79
RTN4-212ENST00000461004 ARHGEF10O15013 1369 aa10.14□□□□□ -0.79
RTN4-212ENST00000461004 KIF7Q2M1P5 1343 aa10.13□□□□□ -0.79
RTN4-212ENST00000461004 CDCA8Q53HL2 280 aa10.13□□□□□ -0.79
RTN4-212ENST00000461004 SMYD5Q6GMV2 418 aa10.13□□□□□ -0.79
RTN4-212ENST00000461004 HDGFL2Q7Z4V5 671 aaPredicted RBP10.13□□□□□ -0.79
RTN4-212ENST00000461004 ZNF710Q8N1W2 664 aa10.13□□□□□ -0.79
RTN4-212ENST00000461004 ZSWIM6Q9HCJ5 1215 aa10.13□□□□□ -0.79
RTN4-212ENST00000461004 TERF2IPQ9NYB0 399 aa10.13□□□□□ -0.79
RTN4-212ENST00000461004 AKAP12Q02952 1782 aa10.12□□□□□ -0.79
RTN4-212ENST00000461004 FAM83GA6ND36 823 aa10.12□□□□□ -0.79
RTN4-212ENST00000461004 ZC3H6P61129 1189 aaKnown RBP10.12□□□□□ -0.79
RTN4-212ENST00000461004 POTEAQ6S8J7 498 aa10.12□□□□□ -0.79
RTN4-212ENST00000461004 NGLY1Q96IV0 654 aa10.12□□□□□ -0.79
RTN4-212ENST00000461004 ANKRD36BQ8N2N9 1353 aa10.12□□□□□ -0.79
RTN4-212ENST00000461004 AFF2P51816 1311 aa10.11□□□□□ -0.79
RTN4-212ENST00000461004 WASHC2AQ641Q2 1341 aa10.11□□□□□ -0.79
RTN4-212ENST00000461004 RIMBP2O15034 1052 aa10.11□□□□□ -0.79
RTN4-212ENST00000461004 FBLN1P23142 703 aa10.11□□□□□ -0.79
RTN4-212ENST00000461004 CHRNA2Q15822 529 aa10.11□□□□□ -0.79
RTN4-212ENST00000461004 ILDR2Q71H61 639 aa10.11□□□□□ -0.79
RTN4-212ENST00000461004 ZC3H15Q8WU90 426 aaKnown RBP10.11□□□□□ -0.79
RTN4-212ENST00000461004 PANK3Q9H999 370 aa10.11□□□□□ -0.79
RTN4-212ENST00000461004 PCDHGA10Q9Y5H3 936 aa10.11□□□□□ -0.79
RTN4-212ENST00000461004 MYOM1P52179 1685 aa10.11□□□□□ -0.79
RTN4-212ENST00000461004 MON2Q7Z3U7 1717 aa10.1□□□□□ -0.79
RTN4-212ENST00000461004 USP19O94966 1318 aa10.1□□□□□ -0.79
RTN4-212ENST00000461004 PIK3C2AO00443 1686 aa10.1□□□□□ -0.79
RTN4-212ENST00000461004 TULP1O00294 542 aaPredicted RBP10.1□□□□□ -0.79
RTN4-212ENST00000461004 SNPHO15079 494 aa10.1□□□□□ -0.79
RTN4-212ENST00000461004 GCP02774 474 aa10.1□□□□□ -0.79
RTN4-212ENST00000461004 NLRP13Q86W25 1043 aa10.1□□□□□ -0.79
RTN4-212ENST00000461004 BRD4O60885 1362 aaPredicted RBP10.1□□□□□ -0.79
RTN4-212ENST00000461004 NINLQ9Y2I6 1382 aa10.1□□□□□ -0.79
RTN4-212ENST00000461004 NRKQ7Z2Y5 1582 aa10.09□□□□□ -0.79
RTN4-212ENST00000461004 TTC21AQ8NDW8 1320 aa10.09□□□□□ -0.79
RTN4-212ENST00000461004 EDC4Q6P2E9 1401 aaKnown RBP10.09□□□□□ -0.79
RTN4-212ENST00000461004 ZBTB7CA1YPR0 619 aa10.09□□□□□ -0.79
RTN4-212ENST00000461004 FYB1O15117 783 aa10.09□□□□□ -0.79
RTN4-212ENST00000461004 HOXB1P14653 301 aaPredicted RBP10.09□□□□□ -0.79
RTN4-212ENST00000461004 FNBP4Q8N3X1 1017 aaPredicted RBP10.09□□□□□ -0.79
RTN4-212ENST00000461004 GGNBP2Q9H3C7 697 aa10.09□□□□□ -0.79
RTN4-212ENST00000461004 ABCA3Q99758 1704 aa10.09□□□□□ -0.79
RTN4-212ENST00000461004 CRYBG1Q9Y4K1 1723 aa10.09□□□□□ -0.79
RTN4-212ENST00000461004 KIAA0232Q92628 1395 aa10.09□□□□□ -0.79
RTN4-212ENST00000461004 CCDC7Q96M83 1385 aa10.09□□□□□ -0.79
RTN4-212ENST00000461004 ZNF316A6NFI3 1004 aaPredicted RBP10.08□□□□□ -0.8
RTN4-212ENST00000461004 GPR37O15354 613 aa10.08□□□□□ -0.8
RTN4-212ENST00000461004 ZEB1P37275 1124 aaPredicted RBP10.08□□□□□ -0.8
RTN4-212ENST00000461004 FOSBP53539 338 aa10.08□□□□□ -0.8
RTN4-212ENST00000461004 USP21Q9UK80 565 aa10.08□□□□□ -0.8
RTN4-212ENST00000461004 LHX6Q9UPM6 363 aa10.08□□□□□ -0.8
RTN4-212ENST00000461004 NSD3Q9BZ95 1437 aa10.07□□□□□ -0.8
RTN4-212ENST00000461004 MARF1Q9Y4F3 1742 aaKnown RBP10.07□□□□□ -0.8
RTN4-212ENST00000461004 USP31Q70CQ4 1352 aa10.07□□□□□ -0.8
RTN4-212ENST00000461004 PHF14O94880 888 aa10.07□□□□□ -0.8
RTN4-212ENST00000461004 PRDM11Q9NQV5 511 aa10.07□□□□□ -0.8
RTN4-212ENST00000461004 PHRF1Q9P1Y6 1649 aaKnown RBP10.07□□□□□ -0.8
RTN4-212ENST00000461004 BCL9LQ86UU0 1499 aa10.06□□□□□ -0.8
RTN4-212ENST00000461004 QTRT2Q9H974 415 aaKnown RBP10.06□□□□□ -0.8
RTN4-212ENST00000461004 BTG4Q9NY30 223 aa10.06□□□□□ -0.8
RTN4-212ENST00000461004 SLIT3O75094 1523 aa10.06□□□□□ -0.8
RTN4-212ENST00000461004 ST18O60284 1047 aa10.05□□□□□ -0.8
RTN4-212ENST00000461004 ZNF772Q68DY9 489 aaPredicted RBP10.05□□□□□ -0.8
RTN4-212ENST00000461004 ARHGEF25Q86VW2 580 aa10.05□□□□□ -0.8
RTN4-212ENST00000461004 GPIHBP1Q8IV16 184 aa10.05□□□□□ -0.8
RTN4-212ENST00000461004 UNC5CLQ8IV45 518 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms