RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 MSH5O43196 834 aa20.51■□□□□ 0.87
NCK1-202ENST00000460960 PRIM1P49642 420 aaKnown RBP20.51■□□□□ 0.87
NCK1-202ENST00000460960 IP6K1Q92551 441 aa20.51■□□□□ 0.87
NCK1-202ENST00000460960 FAM208AQ9UK61 1670 aaKnown RBP20.51■□□□□ 0.87
NCK1-202ENST00000460960 PNPLA7Q6ZV29 1317 aa20.51■□□□□ 0.87
NCK1-202ENST00000460960 TUBGCP6Q96RT7 1819 aa20.5■□□□□ 0.87
NCK1-202ENST00000460960 QSER1Q2KHR3 1735 aa20.5■□□□□ 0.87
NCK1-202ENST00000460960 DOT1LQ8TEK3 1739 aa20.5■□□□□ 0.87
NCK1-202ENST00000460960 HSPA5P11021 654 aaKnown RBP20.5■□□□□ 0.87
NCK1-202ENST00000460960 GIGYF1O75420 1035 aaPredicted RBP20.48■□□□□ 0.87
NCK1-202ENST00000460960 AMPHP49418 695 aa20.48■□□□□ 0.87
NCK1-202ENST00000460960 NLGN2Q8NFZ4 835 aa20.47■□□□□ 0.87
NCK1-202ENST00000460960 COG3Q96JB2 828 aa20.47■□□□□ 0.87
NCK1-202ENST00000460960 ANKRD36BQ8N2N9 1353 aa20.46■□□□□ 0.87
NCK1-202ENST00000460960 CCNL1Q9UK58 526 aaPredicted RBP20.46■□□□□ 0.87
NCK1-202ENST00000460960 RGPD2P0DJD1 1756 aa20.46■□□□□ 0.87
NCK1-202ENST00000460960 FBLN1P23142 703 aa20.45■□□□□ 0.86
NCK1-202ENST00000460960 EIF4G2P78344 907 aaKnown RBP eCLIP20.45■□□□□ 0.86
NCK1-202ENST00000460960 ZCRB1Q8TBF4 217 aaKnown RBP20.45■□□□□ 0.86
NCK1-202ENST00000460960 MAP3K19Q56UN5 1328 aa20.45■□□□□ 0.86
NCK1-202ENST00000460960 HOXC9P31274 260 aa20.44■□□□□ 0.86
NCK1-202ENST00000460960 LY75O60449 1722 aa20.44■□□□□ 0.86
NCK1-202ENST00000460960 MSL1Q68DK7 614 aa20.43■□□□□ 0.86
NCK1-202ENST00000460960 COL24A1Q17RW2 1714 aa20.42■□□□□ 0.86
NCK1-202ENST00000460960 NSD2O96028 1365 aa20.42■□□□□ 0.86
NCK1-202ENST00000460960 MEGF6O75095 1541 aa20.42■□□□□ 0.86
NCK1-202ENST00000460960 SHANK3Q9BYB0 1731 aa20.41■□□□□ 0.86
NCK1-202ENST00000460960 USHBP1Q8N6Y0 703 aa20.4■□□□□ 0.86
NCK1-202ENST00000460960 YBX3P16989 372 aaKnown RBP eCLIP20.39■□□□□ 0.85
NCK1-202ENST00000460960 COL23A1Q86Y22 540 aaPredicted RBP20.39■□□□□ 0.85
NCK1-202ENST00000460960 GRIN3BO60391 1043 aa20.38■□□□□ 0.85
NCK1-202ENST00000460960 RRS1Q15050 365 aaKnown RBP20.38■□□□□ 0.85
NCK1-202ENST00000460960 PUS7Q96PZ0 661 aaKnown RBP20.38■□□□□ 0.85
NCK1-202ENST00000460960 TMF1P82094 1093 aa20.37■□□□□ 0.85
NCK1-202ENST00000460960 RAPGEF4Q8WZA2 1011 aa20.37■□□□□ 0.85
NCK1-202ENST00000460960 SMG6Q86US8 1419 aaKnown RBP20.36■□□□□ 0.85
NCK1-202ENST00000460960 NBPF6Q5VWK0 638 aa20.36■□□□□ 0.85
NCK1-202ENST00000460960 NBPF4Q96M43 638 aa20.36■□□□□ 0.85
NCK1-202ENST00000460960 RTL1A6NKG5 1358 aa20.34■□□□□ 0.85
NCK1-202ENST00000460960 GOLGB1Q14789 3259 aaKnown RBP20.34■□□□□ 0.85
NCK1-202ENST00000460960 TATP17735 454 aaPredicted RBP20.34■□□□□ 0.85
NCK1-202ENST00000460960 GGNBP2Q9H3C7 697 aa20.34■□□□□ 0.85
NCK1-202ENST00000460960 C5P01031 1676 aa20.34■□□□□ 0.85
NCK1-202ENST00000460960 CGNL1Q0VF96 1302 aa20.31■□□□□ 0.84
NCK1-202ENST00000460960 ATP10DQ9P241 1426 aa20.31■□□□□ 0.84
NCK1-202ENST00000460960 MPRIPQ6WCQ1 1025 aa20.31■□□□□ 0.84
NCK1-202ENST00000460960 PALLDQ8WX93 1383 aa20.31■□□□□ 0.84
NCK1-202ENST00000460960 PCDH11XQ9BZA7 1347 aa20.3■□□□□ 0.84
NCK1-202ENST00000460960 PCDH11YQ9BZA8 1340 aa20.3■□□□□ 0.84
NCK1-202ENST00000460960 POLR3GLQ9BT43 218 aa20.3■□□□□ 0.84
NCK1-202ENST00000460960 WWC3Q9ULE0 1092 aa20.3■□□□□ 0.84
NCK1-202ENST00000460960 ZNF526Q8TF50 670 aaPredicted RBP20.29■□□□□ 0.84
NCK1-202ENST00000460960 TAF1LQ8IZX4 1826 aa20.28■□□□□ 0.84
NCK1-202ENST00000460960 FYB1O15117 783 aa20.28■□□□□ 0.84
NCK1-202ENST00000460960 ZEB1P37275 1124 aaPredicted RBP20.28■□□□□ 0.84
NCK1-202ENST00000460960 FLAD1Q8NFF5 587 aa20.28■□□□□ 0.84
NCK1-202ENST00000460960 AK7Q96M32 723 aa20.28■□□□□ 0.84
NCK1-202ENST00000460960 SLC24A1O60721 1099 aa20.27■□□□□ 0.84
NCK1-202ENST00000460960 PHF14O94880 888 aa20.27■□□□□ 0.84
NCK1-202ENST00000460960 HSP90AB2PQ58FF8 381 aa20.27■□□□□ 0.84
NCK1-202ENST00000460960 GPBP1L1Q9HC44 474 aaPredicted RBP20.27■□□□□ 0.84
NCK1-202ENST00000460960 CD2APQ9Y5K6 639 aa20.27■□□□□ 0.84
NCK1-202ENST00000460960 KIF7Q2M1P5 1343 aa20.27■□□□□ 0.83
NCK1-202ENST00000460960 HMGB2P26583 209 aaKnown RBP20.26■□□□□ 0.83
NCK1-202ENST00000460960 KIF20BQ96Q89 1820 aa20.25■□□□□ 0.83
NCK1-202ENST00000460960 C4BP0C0L5 1744 aa20.24■□□□□ 0.83
NCK1-202ENST00000460960 INSRP06213 1382 aa20.24■□□□□ 0.83
NCK1-202ENST00000460960 FLT4P35916 1363 aa20.24■□□□□ 0.83
NCK1-202ENST00000460960 CDCA8Q53HL2 280 aa20.24■□□□□ 0.83
NCK1-202ENST00000460960 SMIM5Q71RC9 77 aa20.24■□□□□ 0.83
NCK1-202ENST00000460960 SMARCC1Q92922 1105 aaPredicted RBP20.24■□□□□ 0.83
NCK1-202ENST00000460960 ITGB4P16144 1822 aa20.24■□□□□ 0.83
NCK1-202ENST00000460960 CYP27B1O15528 508 aa20.23■□□□□ 0.83
NCK1-202ENST00000460960 IFFO2Q5TF58 517 aa20.23■□□□□ 0.83
NCK1-202ENST00000460960 TOGARAM1Q9Y4F4 1720 aa20.23■□□□□ 0.83
NCK1-202ENST00000460960 WASHC2AQ641Q2 1341 aa20.22■□□□□ 0.83
NCK1-202ENST00000460960 IGSF1Q8N6C5 1336 aa20.22■□□□□ 0.83
NCK1-202ENST00000460960 PPM1GO15355 546 aaPredicted RBP20.21■□□□□ 0.83
NCK1-202ENST00000460960 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.2■□□□□ 0.82
NCK1-202ENST00000460960 AMIGO3Q86WK7 504 aa20.2■□□□□ 0.82
NCK1-202ENST00000460960 CARD14Q9BXL6 1004 aa20.2■□□□□ 0.82
NCK1-202ENST00000460960 UBR3Q6ZT12 1888 aa20.2■□□□□ 0.82
NCK1-202ENST00000460960 PIGBQ92521 554 aa20.19■□□□□ 0.82
NCK1-202ENST00000460960 EMILIN1Q9Y6C2 1016 aa20.19■□□□□ 0.82
NCK1-202ENST00000460960 NSD3Q9BZ95 1437 aa20.19■□□□□ 0.82
NCK1-202ENST00000460960 CEP350Q5VT06 3117 aa20.17■□□□□ 0.82
NCK1-202ENST00000460960 PKD1L3Q7Z443 1732 aa20.17■□□□□ 0.82
NCK1-202ENST00000460960 LINC00116Q8NCU8 138 aa20.16■□□□□ 0.82
NCK1-202ENST00000460960 SPG7Q9UQ90 795 aa20.16■□□□□ 0.82
NCK1-202ENST00000460960 ADCY9O60503 1353 aa20.16■□□□□ 0.82
NCK1-202ENST00000460960 KIF24Q5T7B8 1368 aa20.16■□□□□ 0.82
NCK1-202ENST00000460960 LOC102724428A0A0B4J2F2 783 aa20.15■□□□□ 0.82
NCK1-202ENST00000460960 GNPATO15228 680 aa20.15■□□□□ 0.82
NCK1-202ENST00000460960 HSPA6P17066 643 aa20.15■□□□□ 0.82
NCK1-202ENST00000460960 SSFA2P28290 1259 aa20.15■□□□□ 0.82
NCK1-202ENST00000460960 SIK1P57059 783 aa20.15■□□□□ 0.82
NCK1-202ENST00000460960 TMOD3Q9NYL9 352 aa20.15■□□□□ 0.82
NCK1-202ENST00000460960 PANK3Q9H999 370 aa20.14■□□□□ 0.81
NCK1-202ENST00000460960 ATP6V1AP38606 617 aa20.12■□□□□ 0.81
NCK1-202ENST00000460960 ASAP1Q9ULH1 1129 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms