RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 ALDH1L2Q3SY69 923 aa18.12■□□□□ 0.49
ERCC3-205ENST00000460485 VIRMAQ69YN4 1812 aaKnown RBP18.12■□□□□ 0.49
ERCC3-205ENST00000460485 NUTM2FA1L443 756 aa18.11■□□□□ 0.49
ERCC3-205ENST00000460485 PPM1GO15355 546 aaPredicted RBP18.11■□□□□ 0.49
ERCC3-205ENST00000460485 GNAI1P63096 354 aa18.11■□□□□ 0.49
ERCC3-205ENST00000460485 IFT57Q9NWB7 429 aa18.11■□□□□ 0.49
ERCC3-205ENST00000460485 FAM83GA6ND36 823 aa18.1■□□□□ 0.49
ERCC3-205ENST00000460485 BCAR3O75815 825 aa18.1■□□□□ 0.49
ERCC3-205ENST00000460485 BRPF1P55201 1214 aaPredicted RBP18.1■□□□□ 0.49
ERCC3-205ENST00000460485 C20orf194Q5TEA3 1177 aa18.1■□□□□ 0.49
ERCC3-205ENST00000460485 LTN1O94822 1766 aa18.09■□□□□ 0.49
ERCC3-205ENST00000460485 PLCH1Q4KWH8 1693 aa18.09■□□□□ 0.49
ERCC3-205ENST00000460485 TNS3Q68CZ2 1445 aa18.09■□□□□ 0.49
ERCC3-205ENST00000460485 CABLES1Q8TDN4 633 aa18.09■□□□□ 0.49
ERCC3-205ENST00000460485 IPO8O15397 1037 aaKnown RBP18.08■□□□□ 0.48
ERCC3-205ENST00000460485 FAM98CQ17RN3 349 aaKnown RBP18.08■□□□□ 0.48
ERCC3-205ENST00000460485 ZKSCAN2Q63HK3 967 aa18.08■□□□□ 0.48
ERCC3-205ENST00000460485 CLUAP1Q96AJ1 413 aa18.08■□□□□ 0.48
ERCC3-205ENST00000460485 CHMP4BQ9H444 224 aaKnown RBP18.08■□□□□ 0.48
ERCC3-205ENST00000460485 KDRP35968 1356 aa18.07■□□□□ 0.48
ERCC3-205ENST00000460485 A0A0G2JS52 829 aa18.07■□□□□ 0.48
ERCC3-205ENST00000460485 MYT1Q01538 1121 aa18.07■□□□□ 0.48
ERCC3-205ENST00000460485 PMFBP1Q8TBY8 1022 aa18.07■□□□□ 0.48
ERCC3-205ENST00000460485 RRS1Q15050 365 aaKnown RBP18.06■□□□□ 0.48
ERCC3-205ENST00000460485 PHF8Q9UPP1 1060 aa18.06■□□□□ 0.48
ERCC3-205ENST00000460485 EIF4A2Q14240 407 aaKnown RBP18.05■□□□□ 0.48
ERCC3-205ENST00000460485 CAMKK2Q96RR4 588 aa18.05■□□□□ 0.48
ERCC3-205ENST00000460485 LRRC37A3O60309 1634 aa18.05■□□□□ 0.48
ERCC3-205ENST00000460485 EXOSC9Q06265 439 aaKnown RBP18.04■□□□□ 0.48
ERCC3-205ENST00000460485 EZH2Q15910 746 aaKnown RBP18.04■□□□□ 0.48
ERCC3-205ENST00000460485 CACNA1FO60840 1977 aa18.03■□□□□ 0.48
ERCC3-205ENST00000460485 SMC4Q9NTJ3 1288 aa18.03■□□□□ 0.48
ERCC3-205ENST00000460485 BTG4Q9NY30 223 aa18.03■□□□□ 0.48
ERCC3-205ENST00000460485 HMOX1P09601 288 aa18.02■□□□□ 0.48
ERCC3-205ENST00000460485 ZNF853P0CG23 659 aa18.02■□□□□ 0.48
ERCC3-205ENST00000460485 FTSJ3Q8IY81 847 aaKnown RBP18.02■□□□□ 0.48
ERCC3-205ENST00000460485 DZIP1LQ8IYY4 767 aaKnown RBP18.02■□□□□ 0.48
ERCC3-205ENST00000460485 CFAP44Q96MT7 982 aa18.02■□□□□ 0.48
ERCC3-205ENST00000460485 DDX19BQ9UMR2 479 aa18.02■□□□□ 0.48
ERCC3-205ENST00000460485 NFAT5O94916 1531 aa18.02■□□□□ 0.47
ERCC3-205ENST00000460485 MAP3K19Q56UN5 1328 aa18.01■□□□□ 0.47
ERCC3-205ENST00000460485 SPATA31A5Q5VU36 1347 aa18.01■□□□□ 0.47
ERCC3-205ENST00000460485 SPATA31A7Q8IWB4 1347 aa18.01■□□□□ 0.47
ERCC3-205ENST00000460485 TRPM3Q9HCF6 1732 aaPredicted RBP18.01■□□□□ 0.47
ERCC3-205ENST00000460485 DCAF8L1A6NGE4 600 aa18.01■□□□□ 0.47
ERCC3-205ENST00000460485 MVPQ14764 893 aaKnown RBP18.01■□□□□ 0.47
ERCC3-205ENST00000460485 FAM196AQ6ZSG2 479 aa18.01■□□□□ 0.47
ERCC3-205ENST00000460485 ARHGAP45Q92619 1136 aa18.01■□□□□ 0.47
ERCC3-205ENST00000460485 FRAT1Q92837 279 aaPredicted RBP18.01■□□□□ 0.47
ERCC3-205ENST00000460485 SLIT3O75094 1523 aa18.01■□□□□ 0.47
ERCC3-205ENST00000460485 NRAPQ86VF7 1730 aa18.01■□□□□ 0.47
ERCC3-205ENST00000460485 ABCA3Q99758 1704 aa18.01■□□□□ 0.47
ERCC3-205ENST00000460485 IGSF1Q8N6C5 1336 aa18■□□□□ 0.47
ERCC3-205ENST00000460485 LMOD2Q6P5Q4 547 aa18■□□□□ 0.47
ERCC3-205ENST00000460485 TSR2Q969E8 191 aaKnown RBP18■□□□□ 0.47
ERCC3-205ENST00000460485 KIAA0232Q92628 1395 aa18■□□□□ 0.47
ERCC3-205ENST00000460485 TNS1Q9HBL0 1735 aaKnown RBP18■□□□□ 0.47
ERCC3-205ENST00000460485 HTATSF1O43719 755 aaKnown RBP17.99■□□□□ 0.47
ERCC3-205ENST00000460485 ANP32AP39687 249 aaKnown RBP17.99■□□□□ 0.47
ERCC3-205ENST00000460485 FAM182BQ5T319 152 aa17.99■□□□□ 0.47
ERCC3-205ENST00000460485 ATF7IPQ6VMQ6 1270 aa17.99■□□□□ 0.47
ERCC3-205ENST00000460485 PHACTR3Q96KR7 559 aa17.99■□□□□ 0.47
ERCC3-205ENST00000460485 AMPHP49418 695 aa17.98■□□□□ 0.47
ERCC3-205ENST00000460485 NLRP6P59044 892 aa17.98■□□□□ 0.47
ERCC3-205ENST00000460485 KCNH5Q8NCM2 988 aa17.98■□□□□ 0.47
ERCC3-205ENST00000460485 GAS2L2Q8NHY3 880 aa17.98■□□□□ 0.47
ERCC3-205ENST00000460485 COL14A1Q05707 1796 aaKnown RBP17.97■□□□□ 0.47
ERCC3-205ENST00000460485 FBLN1P23142 703 aa17.97■□□□□ 0.47
ERCC3-205ENST00000460485 SULT6B1Q6IMI4 303 aa17.97■□□□□ 0.47
ERCC3-205ENST00000460485 PANK1Q8TE04 598 aa17.97■□□□□ 0.47
ERCC3-205ENST00000460485 SSH1Q8WYL5 1049 aa17.97■□□□□ 0.47
ERCC3-205ENST00000460485 COG6Q9Y2V7 657 aa17.97■□□□□ 0.47
ERCC3-205ENST00000460485 ABCC6O95255 1503 aa17.97■□□□□ 0.47
ERCC3-205ENST00000460485 SOS1Q07889 1333 aaPredicted RBP17.97■□□□□ 0.47
ERCC3-205ENST00000460485 THSD7AQ9UPZ6 1657 aa17.96■□□□□ 0.47
ERCC3-205ENST00000460485 CAMTA1Q9Y6Y1 1673 aa17.96■□□□□ 0.47
ERCC3-205ENST00000460485 NBPF14Q5TI25 921 aa17.96■□□□□ 0.47
ERCC3-205ENST00000460485 RWDD1Q9H446 243 aaPredicted RBP17.96■□□□□ 0.47
ERCC3-205ENST00000460485 PLEKHG5O94827 1062 aa17.95■□□□□ 0.46
ERCC3-205ENST00000460485 TRIM37O94972 964 aa17.95■□□□□ 0.46
ERCC3-205ENST00000460485 APBA3O96018 575 aa17.95■□□□□ 0.46
ERCC3-205ENST00000460485 ABTB2Q8N961 1025 aa17.95■□□□□ 0.46
ERCC3-205ENST00000460485 BACH2Q9BYV9 841 aa17.95■□□□□ 0.46
ERCC3-205ENST00000460485 SPON1Q9HCB6 807 aa17.95■□□□□ 0.46
ERCC3-205ENST00000460485 ALS2Q96Q42 1657 aa17.95■□□□□ 0.46
ERCC3-205ENST00000460485 PLEKHG2Q9H7P9 1386 aa17.94■□□□□ 0.46
ERCC3-205ENST00000460485 HSP90AB2PQ58FF8 381 aa17.94■□□□□ 0.46
ERCC3-205ENST00000460485 FAM208AQ9UK61 1670 aaKnown RBP17.93■□□□□ 0.46
ERCC3-205ENST00000460485 TRIM27P14373 513 aa17.93■□□□□ 0.46
ERCC3-205ENST00000460485 PDE4AP27815 886 aa17.93■□□□□ 0.46
ERCC3-205ENST00000460485 BABAM1Q9NWV8 329 aa17.93■□□□□ 0.46
ERCC3-205ENST00000460485 HOXC9P31274 260 aa17.92■□□□□ 0.46
ERCC3-205ENST00000460485 MBIPQ9NS73 344 aa17.92■□□□□ 0.46
ERCC3-205ENST00000460485 PPP1R1BQ9UD71 204 aaPredicted RBP17.92■□□□□ 0.46
ERCC3-205ENST00000460485 SPATA31A1Q5TZJ5 1347 aa17.92■□□□□ 0.46
ERCC3-205ENST00000460485 N4BP2Q86UW6 1770 aaPredicted RBP17.91■□□□□ 0.46
ERCC3-205ENST00000460485 LMO7Q8WWI1 1683 aa17.91■□□□□ 0.46
ERCC3-205ENST00000460485 KCNQ2O43526 872 aa17.91■□□□□ 0.46
ERCC3-205ENST00000460485 VAMP4O75379 141 aa17.91■□□□□ 0.46
ERCC3-205ENST00000460485 API5Q9BZZ5 524 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms