RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 PLEKHG2Q9H7P9 1386 aa24.09■■□□□ 1.45
PLOD3-209ENST00000460475 APBA3O96018 575 aa24.09■■□□□ 1.45
PLOD3-209ENST00000460475 IL13P35225 146 aa24.08■■□□□ 1.45
PLOD3-209ENST00000460475 DDX54Q8TDD1 881 aaKnown RBP24.08■■□□□ 1.45
PLOD3-209ENST00000460475 CAMKK2Q96RR4 588 aa24.08■■□□□ 1.45
PLOD3-209ENST00000460475 PKD1L3Q7Z443 1732 aa24.07■■□□□ 1.44
PLOD3-209ENST00000460475 EN1Q05925 392 aaPredicted RBP24.07■■□□□ 1.44
PLOD3-209ENST00000460475 PARD3Q8TEW0 1356 aa24.06■■□□□ 1.44
PLOD3-209ENST00000460475 NHSQ6T4R5 1651 aa24.06■■□□□ 1.44
PLOD3-209ENST00000460475 PTF1AQ7RTS3 328 aa24.06■■□□□ 1.44
PLOD3-209ENST00000460475 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.06■■□□□ 1.44
PLOD3-209ENST00000460475 RGPD3A6NKT7 1758 aaPredicted RBP24.04■■□□□ 1.44
PLOD3-209ENST00000460475 RGPD4Q7Z3J3 1758 aa24.04■■□□□ 1.44
PLOD3-209ENST00000460475 PLSCR1O15162 318 aa24.04■■□□□ 1.44
PLOD3-209ENST00000460475 CNGB1Q14028 1251 aaPredicted RBP24.04■■□□□ 1.44
PLOD3-209ENST00000460475 KCNQ2O43526 872 aa24.03■■□□□ 1.44
PLOD3-209ENST00000460475 PCDH11XQ9BZA7 1347 aa24.03■■□□□ 1.44
PLOD3-209ENST00000460475 PCDH11YQ9BZA8 1340 aa24.03■■□□□ 1.44
PLOD3-209ENST00000460475 KDRP35968 1356 aa24.03■■□□□ 1.44
PLOD3-209ENST00000460475 COL3A1P02461 1466 aaPredicted RBP24.02■■□□□ 1.44
PLOD3-209ENST00000460475 EZH2Q15910 746 aaKnown RBP24.02■■□□□ 1.44
PLOD3-209ENST00000460475 CYP27B1O15528 508 aa24.01■■□□□ 1.43
PLOD3-209ENST00000460475 DDX10Q13206 875 aaKnown RBP24.01■■□□□ 1.43
PLOD3-209ENST00000460475 ACSBG1Q96GR2 724 aa24.01■■□□□ 1.43
PLOD3-209ENST00000460475 SPG7Q9UQ90 795 aa24.01■■□□□ 1.43
PLOD3-209ENST00000460475 RREB1Q92766 1687 aa24■■□□□ 1.43
PLOD3-209ENST00000460475 DIAPH1O60610 1272 aaKnown RBP24■■□□□ 1.43
PLOD3-209ENST00000460475 PPP2R1AP30153 589 aa24■■□□□ 1.43
PLOD3-209ENST00000460475 AEBP1Q8IUX7 1158 aa23.98■■□□□ 1.43
PLOD3-209ENST00000460475 BTAF1O14981 1849 aa23.98■■□□□ 1.43
PLOD3-209ENST00000460475 NKX1-1Q15270 411 aaPredicted RBP23.97■■□□□ 1.43
PLOD3-209ENST00000460475 SULT6B1Q6IMI4 303 aa23.97■■□□□ 1.43
PLOD3-209ENST00000460475 DOT1LQ8TEK3 1739 aa23.97■■□□□ 1.43
PLOD3-209ENST00000460475 PRIM1P49642 420 aaKnown RBP23.95■■□□□ 1.42
PLOD3-209ENST00000460475 AMOTQ4VCS5 1084 aa23.94■■□□□ 1.42
PLOD3-209ENST00000460475 NUP188Q5SRE5 1749 aa23.93■■□□□ 1.42
PLOD3-209ENST00000460475 PHKG2P15735 406 aa23.93■■□□□ 1.42
PLOD3-209ENST00000460475 PLEKHO1Q53GL0 409 aaPredicted RBP23.93■■□□□ 1.42
PLOD3-209ENST00000460475 IFNL2Q8IZJ0 200 aa23.93■■□□□ 1.42
PLOD3-209ENST00000460475 PROM2Q8N271 834 aa23.93■■□□□ 1.42
PLOD3-209ENST00000460475 CFAP53Q96M91 514 aa23.93■■□□□ 1.42
PLOD3-209ENST00000460475 TOGARAM1Q9Y4F4 1720 aa23.9■■□□□ 1.42
PLOD3-209ENST00000460475 RALBP1Q15311 655 aa23.9■■□□□ 1.42
PLOD3-209ENST00000460475 ITGB4P16144 1822 aa23.89■■□□□ 1.42
PLOD3-209ENST00000460475 TXNRD1Q16881 649 aa23.89■■□□□ 1.41
PLOD3-209ENST00000460475 SYTL4Q96C24 671 aaPredicted RBP23.89■■□□□ 1.41
PLOD3-209ENST00000460475 HMOX1P09601 288 aa23.88■■□□□ 1.41
PLOD3-209ENST00000460475 ZNF316A6NFI3 1004 aaPredicted RBP23.87■■□□□ 1.41
PLOD3-209ENST00000460475 ZNF530Q6P9A1 599 aaPredicted RBP23.86■■□□□ 1.41
PLOD3-209ENST00000460475 U2SURPO15042 1029 aaKnown RBP23.85■■□□□ 1.41
PLOD3-209ENST00000460475 HSP90AB1P08238 724 aaKnown RBP23.85■■□□□ 1.41
PLOD3-209ENST00000460475 NUDCQ9Y266 331 aa23.85■■□□□ 1.41
PLOD3-209ENST00000460475 NBPF14Q5TI25 921 aa23.84■■□□□ 1.41
PLOD3-209ENST00000460475 DCAF5Q96JK2 942 aa23.84■■□□□ 1.41
PLOD3-209ENST00000460475 LY75O60449 1722 aa23.84■■□□□ 1.41
PLOD3-209ENST00000460475 SRCAPQ6ZRS2 3230 aa23.84■■□□□ 1.41
PLOD3-209ENST00000460475 ERVV-2B6SEH9 535 aa23.82■■□□□ 1.4
PLOD3-209ENST00000460475 SLC27A3Q5K4L6 730 aa23.82■■□□□ 1.4
PLOD3-209ENST00000460475 MPRIPQ6WCQ1 1025 aa23.82■■□□□ 1.4
PLOD3-209ENST00000460475 C1orf141Q5JVX7 400 aa23.81■■□□□ 1.4
PLOD3-209ENST00000460475 PIGBQ92521 554 aa23.81■■□□□ 1.4
PLOD3-209ENST00000460475 KDM6AO15550 1401 aaPredicted RBP23.8■■□□□ 1.4
PLOD3-209ENST00000460475 R3HDM1Q15032 1099 aaKnown RBP23.8■■□□□ 1.4
PLOD3-209ENST00000460475 AKAP4Q5JQC9 854 aa23.8■■□□□ 1.4
PLOD3-209ENST00000460475 LRRC4BQ9NT99 713 aa23.8■■□□□ 1.4
PLOD3-209ENST00000460475 PSDA5PKW4 1024 aaPredicted RBP23.79■■□□□ 1.4
PLOD3-209ENST00000460475 MTHFSDQ2M296 383 aaKnown RBP23.79■■□□□ 1.4
PLOD3-209ENST00000460475 RSPH6AQ9H0K4 717 aa23.79■■□□□ 1.4
PLOD3-209ENST00000460475 PAPPAQ13219 1627 aa23.79■■□□□ 1.4
PLOD3-209ENST00000460475 FCHSD2O94868 740 aa23.78■■□□□ 1.4
PLOD3-209ENST00000460475 ANO8Q9HCE9 1232 aaPredicted RBP23.78■■□□□ 1.4
PLOD3-209ENST00000460475 TMOD3Q9NYL9 352 aa23.78■■□□□ 1.4
PLOD3-209ENST00000460475 MYBBP1AQ9BQG0 1328 aaKnown RBP23.78■■□□□ 1.4
PLOD3-209ENST00000460475 SCN11AQ9UI33 1791 aa23.78■■□□□ 1.4
PLOD3-209ENST00000460475 U2AF1L5P0DN76 240 aaPredicted RBP23.77■■□□□ 1.4
PLOD3-209ENST00000460475 U2AF1Q01081 240 aaKnown RBP eCLIP23.77■■□□□ 1.4
PLOD3-209ENST00000460475 SMARCC1Q92922 1105 aaPredicted RBP23.77■■□□□ 1.4
PLOD3-209ENST00000460475 PRKRIP1Q9H875 184 aaPredicted RBP23.77■■□□□ 1.4
PLOD3-209ENST00000460475 PRKAR2BP31323 418 aa23.75■■□□□ 1.39
PLOD3-209ENST00000460475 ADAMTS7Q9UKP4 1686 aa23.75■■□□□ 1.39
PLOD3-209ENST00000460475 PALLDQ8WX93 1383 aa23.75■■□□□ 1.39
PLOD3-209ENST00000460475 SLC15A2Q16348 729 aa23.74■■□□□ 1.39
PLOD3-209ENST00000460475 VIRMAQ69YN4 1812 aaKnown RBP23.73■■□□□ 1.39
PLOD3-209ENST00000460475 GAS2L2Q8NHY3 880 aa23.73■■□□□ 1.39
PLOD3-209ENST00000460475 PHACTR3Q96KR7 559 aa23.73■■□□□ 1.39
PLOD3-209ENST00000460475 STK32BQ9NY57 414 aa23.73■■□□□ 1.39
PLOD3-209ENST00000460475 CCNL1Q9UK58 526 aaPredicted RBP23.73■■□□□ 1.39
PLOD3-209ENST00000460475 CABP4P57796 275 aa23.72■■□□□ 1.39
PLOD3-209ENST00000460475 ATG3Q9NT62 314 aa23.71■■□□□ 1.39
PLOD3-209ENST00000460475 ASAP1Q9ULH1 1129 aa23.71■■□□□ 1.39
PLOD3-209ENST00000460475 RNMTO43148 476 aaKnown RBP23.7■■□□□ 1.38
PLOD3-209ENST00000460475 HMGB2P26583 209 aaKnown RBP23.7■■□□□ 1.38
PLOD3-209ENST00000460475 KCNQ4P56696 695 aa23.7■■□□□ 1.38
PLOD3-209ENST00000460475 AKT1S1Q96B36 256 aa23.7■■□□□ 1.38
PLOD3-209ENST00000460475 LGR6Q9HBX8 967 aa23.7■■□□□ 1.38
PLOD3-209ENST00000460475 TAF1LQ8IZX4 1826 aa23.7■■□□□ 1.38
PLOD3-209ENST00000460475 MRC1P22897 1456 aa23.69■■□□□ 1.38
PLOD3-209ENST00000460475 NFATC2IPQ8NCF5 419 aa23.69■■□□□ 1.38
PLOD3-209ENST00000460475 MAP3K5Q99683 1374 aa23.68■■□□□ 1.38
PLOD3-209ENST00000460475 ZNF827Q17R98 1081 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms