RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 PLEKHG3A1L390 1219 aa18.99■□□□□ 0.63
LMNB1-203ENST00000460265 CSB-PGBD3P0DP91 1061 aa18.99■□□□□ 0.63
LMNB1-203ENST00000460265 TBX22Q9Y458 520 aa18.99■□□□□ 0.63
LMNB1-203ENST00000460265 MYO3AQ8NEV4 1616 aa18.99■□□□□ 0.63
LMNB1-203ENST00000460265 IQSEC2Q5JU85 1478 aa18.99■□□□□ 0.63
LMNB1-203ENST00000460265 NCLP19338 710 aaKnown RBP18.99■□□□□ 0.63
LMNB1-203ENST00000460265 GNAT3A8MTJ3 354 aa18.98■□□□□ 0.63
LMNB1-203ENST00000460265 TSHZ3Q63HK5 1081 aa18.98■□□□□ 0.63
LMNB1-203ENST00000460265 ANXA1P04083 346 aa18.98■□□□□ 0.63
LMNB1-203ENST00000460265 USP19O94966 1318 aa18.97■□□□□ 0.63
LMNB1-203ENST00000460265 NCBP3Q53F19 620 aaKnown RBP18.97■□□□□ 0.63
LMNB1-203ENST00000460265 HDGFL1Q5TGJ6 251 aa18.97■□□□□ 0.63
LMNB1-203ENST00000460265 ARHGAP45Q92619 1136 aa18.97■□□□□ 0.63
LMNB1-203ENST00000460265 TPM2P07951 284 aa18.97■□□□□ 0.63
LMNB1-203ENST00000460265 ZC3H6P61129 1189 aaKnown RBP18.97■□□□□ 0.63
LMNB1-203ENST00000460265 DIP2BQ9P265 1576 aa18.97■□□□□ 0.63
LMNB1-203ENST00000460265 ATP7BP35670 1465 aa18.96■□□□□ 0.63
LMNB1-203ENST00000460265 OTUD7AQ8TE49 926 aaPredicted RBP18.96■□□□□ 0.63
LMNB1-203ENST00000460265 RBM42Q9BTD8 480 aaKnown RBP18.96■□□□□ 0.63
LMNB1-203ENST00000460265 CHL1O00533 1208 aa18.95■□□□□ 0.62
LMNB1-203ENST00000460265 CCDC30Q5VVM6 783 aa18.95■□□□□ 0.62
LMNB1-203ENST00000460265 PROSER2Q86WR7 435 aaPredicted RBP18.95■□□□□ 0.62
LMNB1-203ENST00000460265 FAM135BQ49AJ0 1406 aa18.95■□□□□ 0.62
LMNB1-203ENST00000460265 FOXD4L5Q5VV16 416 aaPredicted RBP18.95■□□□□ 0.62
LMNB1-203ENST00000460265 FOXD4L4Q8WXT5 416 aaPredicted RBP18.95■□□□□ 0.62
LMNB1-203ENST00000460265 LRRC59Q96AG4 307 aaKnown RBP18.95■□□□□ 0.62
LMNB1-203ENST00000460265 MPRIPQ6WCQ1 1025 aa18.95■□□□□ 0.62
LMNB1-203ENST00000460265 TBC1D9Q6ZT07 1266 aa18.95■□□□□ 0.62
LMNB1-203ENST00000460265 MRE11P49959 708 aa18.94■□□□□ 0.62
LMNB1-203ENST00000460265 CDC45O75419 566 aa18.94■□□□□ 0.62
LMNB1-203ENST00000460265 AIMP1Q12904 312 aaKnown RBP18.94■□□□□ 0.62
LMNB1-203ENST00000460265 SIRT1Q96EB6 747 aa18.94■□□□□ 0.62
LMNB1-203ENST00000460265 SETD1BQ9UPS6 1966 aaKnown RBP18.93■□□□□ 0.62
LMNB1-203ENST00000460265 CPS1P31327 1500 aa18.93■□□□□ 0.62
LMNB1-203ENST00000460265 LRRC7Q96NW7 1537 aa18.93■□□□□ 0.62
LMNB1-203ENST00000460265 ZNF853P0CG23 659 aa18.93■□□□□ 0.62
LMNB1-203ENST00000460265 C1orf141Q5JVX7 400 aa18.93■□□□□ 0.62
LMNB1-203ENST00000460265 SIRT2Q8IXJ6 389 aa18.93■□□□□ 0.62
LMNB1-203ENST00000460265 ARID3AQ99856 593 aa18.93■□□□□ 0.62
LMNB1-203ENST00000460265 ZNF530Q6P9A1 599 aaPredicted RBP18.93■□□□□ 0.62
LMNB1-203ENST00000460265 IL1RAPL2Q9NP60 686 aa18.93■□□□□ 0.62
LMNB1-203ENST00000460265 CHMP5Q9NZZ3 219 aa18.92■□□□□ 0.62
LMNB1-203ENST00000460265 CPSF1Q10570 1443 aaKnown RBP18.92■□□□□ 0.62
LMNB1-203ENST00000460265 GNAI2P04899 355 aa18.91■□□□□ 0.62
LMNB1-203ENST00000460265 KIAA1211Q6ZU35 1233 aa18.91■□□□□ 0.62
LMNB1-203ENST00000460265 NLRP2Q9NX02 1062 aa18.91■□□□□ 0.62
LMNB1-203ENST00000460265 SHPRHQ149N8 1683 aa18.91■□□□□ 0.62
LMNB1-203ENST00000460265 HOXC9P31274 260 aa18.91■□□□□ 0.62
LMNB1-203ENST00000460265 FLIIQ13045 1269 aa18.91■□□□□ 0.62
LMNB1-203ENST00000460265 BMP2KLQ5H9B9 411 aa18.91■□□□□ 0.62
LMNB1-203ENST00000460265 RPAP2Q8IXW5 612 aaPredicted RBP18.91■□□□□ 0.62
LMNB1-203ENST00000460265 ORAI2Q96SN7 254 aa18.91■□□□□ 0.62
LMNB1-203ENST00000460265 TTC21AQ8NDW8 1320 aa18.91■□□□□ 0.62
LMNB1-203ENST00000460265 FLT4P35916 1363 aa18.9■□□□□ 0.62
LMNB1-203ENST00000460265 AATKQ6ZMQ8 1374 aa18.9■□□□□ 0.62
LMNB1-203ENST00000460265 UBTFL1P0CB47 393 aaPredicted RBP18.9■□□□□ 0.62
LMNB1-203ENST00000460265 TAF7Q15545 349 aaPredicted RBP18.9■□□□□ 0.62
LMNB1-203ENST00000460265 A0A0G2JS52 829 aa18.9■□□□□ 0.62
LMNB1-203ENST00000460265 MAP2P11137 1827 aaKnown RBP18.89■□□□□ 0.62
LMNB1-203ENST00000460265 TRAK2O60296 914 aa18.89■□□□□ 0.61
LMNB1-203ENST00000460265 MAP4K4O95819 1239 aaPredicted RBP18.89■□□□□ 0.61
LMNB1-203ENST00000460265 NLRP1Q9C000 1473 aa18.89■□□□□ 0.61
LMNB1-203ENST00000460265 SURF6O75683 361 aaKnown RBP18.89■□□□□ 0.61
LMNB1-203ENST00000460265 FAM13BQ9NYF5 915 aa18.89■□□□□ 0.61
LMNB1-203ENST00000460265 FSD2A1L4K1 749 aa18.88■□□□□ 0.61
LMNB1-203ENST00000460265 MCM4P33991 863 aa18.88■□□□□ 0.61
LMNB1-203ENST00000460265 GRPEL1Q9HAV7 217 aa18.88■□□□□ 0.61
LMNB1-203ENST00000460265 USP6P35125 1406 aa18.88■□□□□ 0.61
LMNB1-203ENST00000460265 CCT4P50991 539 aaKnown RBP18.88■□□□□ 0.61
LMNB1-203ENST00000460265 FOXD4L6Q3SYB3 417 aaPredicted RBP18.88■□□□□ 0.61
LMNB1-203ENST00000460265 FOXD4L3Q6VB84 417 aaPredicted RBP18.88■□□□□ 0.61
LMNB1-203ENST00000460265 PLEKHG1Q9ULL1 1385 aa18.88■□□□□ 0.61
LMNB1-203ENST00000460265 CEP85Q6P2H3 762 aa18.87■□□□□ 0.61
LMNB1-203ENST00000460265 COL3A1P02461 1466 aaPredicted RBP18.87■□□□□ 0.61
LMNB1-203ENST00000460265 INTS3Q68E01 1043 aaKnown RBP18.87■□□□□ 0.61
LMNB1-203ENST00000460265 LRRFIP2Q9Y608 721 aaKnown RBP18.87■□□□□ 0.61
LMNB1-203ENST00000460265 ANKRD44Q8N8A2 993 aa18.87■□□□□ 0.61
LMNB1-203ENST00000460265 ANO2Q9NQ90 1003 aa18.87■□□□□ 0.61
LMNB1-203ENST00000460265 C9orf78Q9NZ63 289 aaPredicted RBP18.87■□□□□ 0.61
LMNB1-203ENST00000460265 FGD1P98174 961 aa18.86■□□□□ 0.61
LMNB1-203ENST00000460265 PHAXQ9H814 394 aaKnown RBP18.86■□□□□ 0.61
LMNB1-203ENST00000460265 LGR6Q9HBX8 967 aa18.86■□□□□ 0.61
LMNB1-203ENST00000460265 ABCC4O15439 1325 aa18.86■□□□□ 0.61
LMNB1-203ENST00000460265 PLEKHM2Q8IWE5 1019 aa18.86■□□□□ 0.61
LMNB1-203ENST00000460265 DCTPP1Q9H773 170 aa18.86■□□□□ 0.61
LMNB1-203ENST00000460265 BTBD11A6QL63 1104 aa18.86■□□□□ 0.61
LMNB1-203ENST00000460265 GNAI3P08754 354 aa18.86■□□□□ 0.61
LMNB1-203ENST00000460265 MSH6P52701 1360 aa18.86■□□□□ 0.61
LMNB1-203ENST00000460265 ERBB4Q15303 1308 aa18.85■□□□□ 0.61
LMNB1-203ENST00000460265 MED14O60244 1454 aa18.85■□□□□ 0.61
LMNB1-203ENST00000460265 IL17REQ8NFR9 667 aa18.85■□□□□ 0.61
LMNB1-203ENST00000460265 ZNF330Q9Y3S2 320 aaPredicted RBP18.85■□□□□ 0.61
LMNB1-203ENST00000460265 GOLGA6L22H0YM25 854 aa18.85■□□□□ 0.61
LMNB1-203ENST00000460265 AGLP35573 1532 aa18.84■□□□□ 0.61
LMNB1-203ENST00000460265 ADAMTS13Q76LX8 1427 aa18.84■□□□□ 0.61
LMNB1-203ENST00000460265 PTPRCP08575 1304 aa18.84■□□□□ 0.61
LMNB1-203ENST00000460265 NBPF6Q5VWK0 638 aa18.84■□□□□ 0.61
LMNB1-203ENST00000460265 NBPF4Q96M43 638 aa18.84■□□□□ 0.61
LMNB1-203ENST00000460265 PRDM4Q9UKN5 801 aa18.84■□□□□ 0.61
LMNB1-203ENST00000460265 CCDC9Q9Y3X0 531 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms