RNA–Protein interactions for RNA: ENST00000460215.5

SCMH1-212, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-212ENST00000460215 RAB3GAP2Q9H2M9 1393 aa12.45□□□□□ -0.42
SCMH1-212ENST00000460215 TRIM26Q12899 539 aaPredicted RBP12.45□□□□□ -0.42
SCMH1-212ENST00000460215 C16orf71Q8IYS4 520 aaPredicted RBP12.45□□□□□ -0.42
SCMH1-212ENST00000460215 DDX54Q8TDD1 881 aaKnown RBP12.45□□□□□ -0.42
SCMH1-212ENST00000460215 HSPA1AP0DMV8 641 aaKnown RBP12.44□□□□□ -0.42
SCMH1-212ENST00000460215 HSPA1BP0DMV9 641 aaKnown RBP12.44□□□□□ -0.42
SCMH1-212ENST00000460215 PRIM1P49642 420 aaKnown RBP12.44□□□□□ -0.42
SCMH1-212ENST00000460215 ANKRD36BQ8N2N9 1353 aa12.43□□□□□ -0.42
SCMH1-212ENST00000460215 LY75O60449 1722 aa12.43□□□□□ -0.42
SCMH1-212ENST00000460215 FSTL1Q12841 308 aa12.43□□□□□ -0.42
SCMH1-212ENST00000460215 PCDH10Q9P2E7 1040 aa12.43□□□□□ -0.42
SCMH1-212ENST00000460215 NSD2O96028 1365 aa12.43□□□□□ -0.42
SCMH1-212ENST00000460215 TTC21BQ7Z4L5 1316 aa12.42□□□□□ -0.42
SCMH1-212ENST00000460215 STAC3Q96MF2 364 aa12.42□□□□□ -0.42
SCMH1-212ENST00000460215 FLAD1Q8NFF5 587 aa12.41□□□□□ -0.42
SCMH1-212ENST00000460215 DOT1LQ8TEK3 1739 aa12.41□□□□□ -0.42
SCMH1-212ENST00000460215 USP47Q96K76 1375 aa12.4□□□□□ -0.42
SCMH1-212ENST00000460215 TTC21AQ8NDW8 1320 aa12.39□□□□□ -0.43
SCMH1-212ENST00000460215 CENPJQ9HC77 1338 aaPredicted RBP12.39□□□□□ -0.43
SCMH1-212ENST00000460215 ANKRD24Q8TF21 1146 aa12.39□□□□□ -0.43
SCMH1-212ENST00000460215 ARHGAP27Q6ZUM4 889 aa12.37□□□□□ -0.43
SCMH1-212ENST00000460215 BCS1LQ9Y276 419 aa12.37□□□□□ -0.43
SCMH1-212ENST00000460215 C5P01031 1676 aa12.37□□□□□ -0.43
SCMH1-212ENST00000460215 PXDNLA1KZ92 1463 aa12.36□□□□□ -0.43
SCMH1-212ENST00000460215 PLEKHG2Q9H7P9 1386 aa12.36□□□□□ -0.43
SCMH1-212ENST00000460215 ZNF692Q9BU19 519 aaPredicted RBP12.36□□□□□ -0.43
SCMH1-212ENST00000460215 USP54Q70EL1 1684 aa12.35□□□□□ -0.43
SCMH1-212ENST00000460215 PHF14O94880 888 aa12.35□□□□□ -0.43
SCMH1-212ENST00000460215 SMC1BQ8NDV3 1235 aa12.35□□□□□ -0.43
SCMH1-212ENST00000460215 AK7Q96M32 723 aa12.35□□□□□ -0.43
SCMH1-212ENST00000460215 KCPQ6ZWJ8 1503 aa12.35□□□□□ -0.43
SCMH1-212ENST00000460215 KDM2BQ8NHM5 1336 aa12.35□□□□□ -0.43
SCMH1-212ENST00000460215 C9orf131Q5VYM1 1079 aa12.34□□□□□ -0.43
SCMH1-212ENST00000460215 C10orf71Q711Q0 1435 aa12.34□□□□□ -0.43
SCMH1-212ENST00000460215 HMGB2P26583 209 aaKnown RBP12.33□□□□□ -0.44
SCMH1-212ENST00000460215 NBPF1Q3BBV0 1214 aa12.33□□□□□ -0.44
SCMH1-212ENST00000460215 AMIGO3Q86WK7 504 aa12.33□□□□□ -0.44
SCMH1-212ENST00000460215 KTN1Q86UP2 1357 aaKnown RBP12.32□□□□□ -0.44
SCMH1-212ENST00000460215 PALLDQ8WX93 1383 aa12.32□□□□□ -0.44
SCMH1-212ENST00000460215 KIAA1210Q9ULL0 1709 aa12.32□□□□□ -0.44
SCMH1-212ENST00000460215 TOGARAM1Q9Y4F4 1720 aa12.32□□□□□ -0.44
SCMH1-212ENST00000460215 NSD3Q9BZ95 1437 aa12.32□□□□□ -0.44
SCMH1-212ENST00000460215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.32□□□□□ -0.44
SCMH1-212ENST00000460215 FAM161AQ3B820 660 aa12.32□□□□□ -0.44
SCMH1-212ENST00000460215 SMIM5Q71RC9 77 aa12.32□□□□□ -0.44
SCMH1-212ENST00000460215 RRAGCQ9HB90 399 aa12.32□□□□□ -0.44
SCMH1-212ENST00000460215 LTN1O94822 1766 aa12.32□□□□□ -0.44
SCMH1-212ENST00000460215 EVC2Q86UK5 1308 aa12.32□□□□□ -0.44
SCMH1-212ENST00000460215 C4BP0C0L5 1744 aa12.31□□□□□ -0.44
SCMH1-212ENST00000460215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.31□□□□□ -0.44
SCMH1-212ENST00000460215 ZCRB1Q8TBF4 217 aaKnown RBP12.31□□□□□ -0.44
SCMH1-212ENST00000460215 LTV1Q96GA3 475 aaPredicted RBP12.31□□□□□ -0.44
SCMH1-212ENST00000460215 USP31Q70CQ4 1352 aa12.3□□□□□ -0.44
SCMH1-212ENST00000460215 A0A0G2JLW4 131 aa12.3□□□□□ -0.44
SCMH1-212ENST00000460215 FCHSD2O94868 740 aa12.3□□□□□ -0.44
SCMH1-212ENST00000460215 MMP10P09238 476 aa12.3□□□□□ -0.44
SCMH1-212ENST00000460215 PCGF6Q9BYE7 350 aa12.3□□□□□ -0.44
SCMH1-212ENST00000460215 TAF1LQ8IZX4 1826 aa12.3□□□□□ -0.44
SCMH1-212ENST00000460215 TNRC6CQ9HCJ0 1690 aaKnown RBP12.29□□□□□ -0.44
SCMH1-212ENST00000460215 PKD1L3Q7Z443 1732 aa12.29□□□□□ -0.44
SCMH1-212ENST00000460215 KIAA1551Q9HCM1 1747 aa12.29□□□□□ -0.44
SCMH1-212ENST00000460215 MEGF6O75095 1541 aa12.29□□□□□ -0.44
SCMH1-212ENST00000460215 SSFA2P28290 1259 aa12.29□□□□□ -0.44
SCMH1-212ENST00000460215 TGFB2P61812 414 aa12.29□□□□□ -0.44
SCMH1-212ENST00000460215 NME9Q86XW9 330 aa12.29□□□□□ -0.44
SCMH1-212ENST00000460215 RNF181Q9P0P0 153 aa12.29□□□□□ -0.44
SCMH1-212ENST00000460215 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
SCMH1-212ENST00000460215 N4BP2Q86UW6 1770 aaPredicted RBP12.28□□□□□ -0.44
SCMH1-212ENST00000460215 UBR3Q6ZT12 1888 aa12.27□□□□□ -0.44
SCMH1-212ENST00000460215 DPEP1P16444 411 aa12.27□□□□□ -0.45
SCMH1-212ENST00000460215 KIF13BQ9NQT8 1826 aa12.26□□□□□ -0.45
SCMH1-212ENST00000460215 FOXN1O15353 648 aa12.26□□□□□ -0.45
SCMH1-212ENST00000460215 IP6K1Q92551 441 aa12.26□□□□□ -0.45
SCMH1-212ENST00000460215 MON2Q7Z3U7 1717 aa12.25□□□□□ -0.45
SCMH1-212ENST00000460215 MPRIPQ6WCQ1 1025 aa12.25□□□□□ -0.45
SCMH1-212ENST00000460215 PRDM10Q9NQV6 1147 aa12.25□□□□□ -0.45
SCMH1-212ENST00000460215 GNPATO15228 680 aa12.24□□□□□ -0.45
SCMH1-212ENST00000460215 SMARCC1Q92922 1105 aaPredicted RBP12.24□□□□□ -0.45
SCMH1-212ENST00000460215 SBNO2Q9Y2G9 1366 aa12.23□□□□□ -0.45
SCMH1-212ENST00000460215 LINC00116Q8NCU8 138 aa12.23□□□□□ -0.45
SCMH1-212ENST00000460215 CCDC87Q9NVE4 849 aa12.23□□□□□ -0.45
SCMH1-212ENST00000460215 MKRN1Q9UHC7 482 aaKnown RBP12.23□□□□□ -0.45
SCMH1-212ENST00000460215 ABHD8Q96I13 439 aa12.22□□□□□ -0.45
SCMH1-212ENST00000460215 DCAF5Q96JK2 942 aa12.22□□□□□ -0.45
SCMH1-212ENST00000460215 BRCA1P38398 1863 aaKnown RBP12.21□□□□□ -0.45
SCMH1-212ENST00000460215 CGNL1Q0VF96 1302 aa12.21□□□□□ -0.45
SCMH1-212ENST00000460215 PCDH11XQ9BZA7 1347 aa12.21□□□□□ -0.45
SCMH1-212ENST00000460215 PCDH11YQ9BZA8 1340 aa12.21□□□□□ -0.45
SCMH1-212ENST00000460215 VEGFAP15692 232 aaPredicted RBP12.21□□□□□ -0.45
SCMH1-212ENST00000460215 CTCFP49711 727 aaPredicted RBP12.21□□□□□ -0.45
SCMH1-212ENST00000460215 MLLT1Q03111 559 aaPredicted RBP12.21□□□□□ -0.45
SCMH1-212ENST00000460215 RAPGEF4Q8WZA2 1011 aa12.21□□□□□ -0.45
SCMH1-212ENST00000460215 AIDAQ96BJ3 306 aa12.21□□□□□ -0.45
SCMH1-212ENST00000460215 PIM2Q9P1W9 311 aa12.21□□□□□ -0.45
SCMH1-212ENST00000460215 ARFGEF1Q9Y6D6 1849 aa12.21□□□□□ -0.46
SCMH1-212ENST00000460215 KCNA3P22001 575 aa12.2□□□□□ -0.46
SCMH1-212ENST00000460215 DALRD3Q5D0E6 543 aaKnown RBP12.2□□□□□ -0.46
SCMH1-212ENST00000460215 ZC3H4Q9UPT8 1303 aaKnown RBP12.19□□□□□ -0.46
SCMH1-212ENST00000460215 LOC102724428A0A0B4J2F2 783 aa12.19□□□□□ -0.46
SCMH1-212ENST00000460215 HOXC9P31274 260 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms