RNA–Protein interactions for RNA: ENST00000459992.5

SCML4-207, Transcript of Scm polycomb group protein like 4, humanhuman

TSL 5

Gene SCML4, Length 1,964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4-207ENST00000459992 KIAA0232Q92628 1395 aa17.1■□□□□ 0.33
SCML4-207ENST00000459992 ELL2O00472 640 aaPredicted RBP17.09■□□□□ 0.33
SCML4-207ENST00000459992 HOXC9P31274 260 aa17.09■□□□□ 0.33
SCML4-207ENST00000459992 EYA1Q99502 592 aa17.09■□□□□ 0.33
SCML4-207ENST00000459992 RTF1Q92541 710 aaKnown RBP17.09■□□□□ 0.33
SCML4-207ENST00000459992 NUTM2GQ5VZR2 741 aa17.08■□□□□ 0.33
SCML4-207ENST00000459992 MCM10Q7L590 875 aa17.08■□□□□ 0.33
SCML4-207ENST00000459992 CRB1P82279 1406 aa17.08■□□□□ 0.32
SCML4-207ENST00000459992 NCOA3Q9Y6Q9 1424 aa17.08■□□□□ 0.32
SCML4-207ENST00000459992 STRCP1A6NGW2 1772 aa17.08■□□□□ 0.32
SCML4-207ENST00000459992 ABCC4O15439 1325 aa17.08■□□□□ 0.32
SCML4-207ENST00000459992 LTN1O94822 1766 aa17.07■□□□□ 0.32
SCML4-207ENST00000459992 HTATSF1O43719 755 aaKnown RBP17.07■□□□□ 0.32
SCML4-207ENST00000459992 MTHFSDQ2M296 383 aaKnown RBP17.07■□□□□ 0.32
SCML4-207ENST00000459992 MSH6P52701 1360 aa17.07■□□□□ 0.32
SCML4-207ENST00000459992 CADPS2Q86UW7 1296 aa17.06■□□□□ 0.32
SCML4-207ENST00000459992 PSME1Q06323 249 aa17.06■□□□□ 0.32
SCML4-207ENST00000459992 SMC5Q8IY18 1101 aa17.05■□□□□ 0.32
SCML4-207ENST00000459992 ORAI2Q96SN7 254 aa17.05■□□□□ 0.32
SCML4-207ENST00000459992 ZBTB7BO15156 539 aaPredicted RBP17.04■□□□□ 0.32
SCML4-207ENST00000459992 NFAT5O94916 1531 aa17.04■□□□□ 0.32
SCML4-207ENST00000459992 KCNH5Q8NCM2 988 aa17.04■□□□□ 0.32
SCML4-207ENST00000459992 LRRC37A3O60309 1634 aa17.03■□□□□ 0.32
SCML4-207ENST00000459992 PHRF1Q9P1Y6 1649 aaKnown RBP17.02■□□□□ 0.32
SCML4-207ENST00000459992 FOXO3O43524 673 aa17.02■□□□□ 0.31
SCML4-207ENST00000459992 IP6K1Q92551 441 aa17.02■□□□□ 0.31
SCML4-207ENST00000459992 TSPYL4Q9UJ04 414 aa17.01■□□□□ 0.31
SCML4-207ENST00000459992 KIF1AQ12756 1690 aa17.01■□□□□ 0.31
SCML4-207ENST00000459992 GNAT3A8MTJ3 354 aa17■□□□□ 0.31
SCML4-207ENST00000459992 PTPRCP08575 1304 aa17■□□□□ 0.31
SCML4-207ENST00000459992 DCCP43146 1447 aa17■□□□□ 0.31
SCML4-207ENST00000459992 LTV1Q96GA3 475 aaPredicted RBP17■□□□□ 0.31
SCML4-207ENST00000459992 C1orf167Q5SNV9 1468 aa17■□□□□ 0.31
SCML4-207ENST00000459992 MAP3K5Q99683 1374 aa16.99■□□□□ 0.31
SCML4-207ENST00000459992 GCC1Q96CN9 775 aa16.99■□□□□ 0.31
SCML4-207ENST00000459992 DAXXQ9UER7 740 aaPredicted RBP16.99■□□□□ 0.31
SCML4-207ENST00000459992 NUCB1Q02818 461 aa16.98■□□□□ 0.31
SCML4-207ENST00000459992 KRT24Q2M2I5 525 aa16.98■□□□□ 0.31
SCML4-207ENST00000459992 INTS3Q68E01 1043 aaKnown RBP16.98■□□□□ 0.31
SCML4-207ENST00000459992 SLIT3O75094 1523 aa16.98■□□□□ 0.31
SCML4-207ENST00000459992 UPF2Q9HAU5 1272 aaKnown RBP16.98■□□□□ 0.31
SCML4-207ENST00000459992 BABAM1Q9NWV8 329 aa16.97■□□□□ 0.31
SCML4-207ENST00000459992 MST1RQ04912 1400 aa16.97■□□□□ 0.31
SCML4-207ENST00000459992 XPCQ01831 940 aaPredicted RBP16.97■□□□□ 0.31
SCML4-207ENST00000459992 TRPM3Q9HCF6 1732 aaPredicted RBP16.96■□□□□ 0.31
SCML4-207ENST00000459992 SLAIN2Q9P270 581 aa16.96■□□□□ 0.31
SCML4-207ENST00000459992 SOS1Q07889 1333 aaPredicted RBP16.96■□□□□ 0.31
SCML4-207ENST00000459992 RGS12O14924 1447 aa16.96■□□□□ 0.31
SCML4-207ENST00000459992 KRT28Q7Z3Y7 464 aa16.95■□□□□ 0.3
SCML4-207ENST00000459992 MIS18AQ9NYP9 233 aa16.95■□□□□ 0.3
SCML4-207ENST00000459992 USP19O94966 1318 aa16.95■□□□□ 0.3
SCML4-207ENST00000459992 CHD1LQ86WJ1 897 aa16.95■□□□□ 0.3
SCML4-207ENST00000459992 C1orf115Q9H7X2 142 aa16.95■□□□□ 0.3
SCML4-207ENST00000459992 SEC24BO95487 1268 aa16.93■□□□□ 0.3
SCML4-207ENST00000459992 SLC4A2P04920 1241 aa16.93■□□□□ 0.3
SCML4-207ENST00000459992 LMOD2Q6P5Q4 547 aa16.93■□□□□ 0.3
SCML4-207ENST00000459992 USHBP1Q8N6Y0 703 aa16.93■□□□□ 0.3
SCML4-207ENST00000459992 XIRP1Q702N8 1843 aaKnown RBP16.93■□□□□ 0.3
SCML4-207ENST00000459992 ZBTB7CA1YPR0 619 aa16.92■□□□□ 0.3
SCML4-207ENST00000459992 TAF7Q15545 349 aaPredicted RBP16.92■□□□□ 0.3
SCML4-207ENST00000459992 STK31Q9BXU1 1019 aa16.92■□□□□ 0.3
SCML4-207ENST00000459992 FAM208AQ9UK61 1670 aaKnown RBP16.92■□□□□ 0.3
SCML4-207ENST00000459992 GCP02774 474 aa16.91■□□□□ 0.3
SCML4-207ENST00000459992 IL17REQ8NFR9 667 aa16.91■□□□□ 0.3
SCML4-207ENST00000459992 DDX17Q92841 729 aaKnown RBP16.91■□□□□ 0.3
SCML4-207ENST00000459992 LNPKQ9C0E8 428 aa16.91■□□□□ 0.3
SCML4-207ENST00000459992 CACNA1FO60840 1977 aa16.91■□□□□ 0.3
SCML4-207ENST00000459992 ANKRD45Q5TZF3 282 aa16.91■□□□□ 0.3
SCML4-207ENST00000459992 CCDC30Q5VVM6 783 aa16.91■□□□□ 0.3
SCML4-207ENST00000459992 NBPF6Q5VWK0 638 aa16.91■□□□□ 0.3
SCML4-207ENST00000459992 ARHGEF25Q86VW2 580 aa16.91■□□□□ 0.3
SCML4-207ENST00000459992 NBPF4Q96M43 638 aa16.91■□□□□ 0.3
SCML4-207ENST00000459992 RGPD2P0DJD1 1756 aa16.91■□□□□ 0.3
SCML4-207ENST00000459992 BRINP3Q76B58 766 aa16.9■□□□□ 0.3
SCML4-207ENST00000459992 SIRT2Q8IXJ6 389 aa16.9■□□□□ 0.3
SCML4-207ENST00000459992 LMO7Q8WWI1 1683 aa16.9■□□□□ 0.3
SCML4-207ENST00000459992 NPHP3Q7Z494 1330 aa16.9■□□□□ 0.3
SCML4-207ENST00000459992 PLEKHG5O94827 1062 aa16.89■□□□□ 0.3
SCML4-207ENST00000459992 NBR1Q14596 966 aa16.89■□□□□ 0.3
SCML4-207ENST00000459992 RPAP2Q8IXW5 612 aaPredicted RBP16.89■□□□□ 0.3
SCML4-207ENST00000459992 CCT4P50991 539 aaKnown RBP16.89■□□□□ 0.29
SCML4-207ENST00000459992 TBC1D32Q96NH3 1257 aa16.89■□□□□ 0.29
SCML4-207ENST00000459992 NCAPD2Q15021 1401 aa16.88■□□□□ 0.29
SCML4-207ENST00000459992 BECN1Q14457 450 aa16.88■□□□□ 0.29
SCML4-207ENST00000459992 PLEKHO1Q53GL0 409 aaPredicted RBP16.88■□□□□ 0.29
SCML4-207ENST00000459992 ANKRD44Q8N8A2 993 aa16.88■□□□□ 0.29
SCML4-207ENST00000459992 CEMIPQ8WUJ3 1361 aa16.88■□□□□ 0.29
SCML4-207ENST00000459992 MED1Q15648 1581 aaPredicted RBP16.88■□□□□ 0.29
SCML4-207ENST00000459992 ALS2Q96Q42 1657 aa16.88■□□□□ 0.29
SCML4-207ENST00000459992 CAMTA1Q9Y6Y1 1673 aa16.88■□□□□ 0.29
SCML4-207ENST00000459992 RTL5Q5HYW3 569 aaPredicted RBP16.88■□□□□ 0.29
SCML4-207ENST00000459992 AMOTQ4VCS5 1084 aa16.87■□□□□ 0.29
SCML4-207ENST00000459992 LTBP4Q8N2S1 1624 aa16.87■□□□□ 0.29
SCML4-207ENST00000459992 ATP10DQ9P241 1426 aa16.87■□□□□ 0.29
SCML4-207ENST00000459992 G2E3Q7L622 706 aa16.86■□□□□ 0.29
SCML4-207ENST00000459992 DCTPP1Q9H773 170 aa16.86■□□□□ 0.29
SCML4-207ENST00000459992 SLC4A3P48751 1232 aa16.86■□□□□ 0.29
SCML4-207ENST00000459992 BMP2KLQ5H9B9 411 aa16.86■□□□□ 0.29
SCML4-207ENST00000459992 AKAP4Q5JQC9 854 aa16.86■□□□□ 0.29
SCML4-207ENST00000459992 ANKRD24Q8TF21 1146 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms