RNA–Protein interactions for RNA: ENST00000459750.5

MCF2L2-204, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 3,090 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-204ENST00000459750 NBPF6Q5VWK0 638 aa11.32□□□□□ -0.6
MCF2L2-204ENST00000459750 DDRGK1Q96HY6 314 aa11.32□□□□□ -0.6
MCF2L2-204ENST00000459750 NBPF4Q96M43 638 aa11.32□□□□□ -0.6
MCF2L2-204ENST00000459750 IL16Q14005 1332 aa11.32□□□□□ -0.6
MCF2L2-204ENST00000459750 UBR1Q8IWV7 1749 aa11.32□□□□□ -0.6
MCF2L2-204ENST00000459750 ZNF853P0CG23 659 aa11.32□□□□□ -0.6
MCF2L2-204ENST00000459750 CHRNA2Q15822 529 aa11.31□□□□□ -0.6
MCF2L2-204ENST00000459750 CHD1LQ86WJ1 897 aa11.31□□□□□ -0.6
MCF2L2-204ENST00000459750 USP32Q8NFA0 1604 aa11.31□□□□□ -0.6
MCF2L2-204ENST00000459750 MED14O60244 1454 aa11.31□□□□□ -0.6
MCF2L2-204ENST00000459750 PIP4K2AP48426 406 aaPredicted RBP11.31□□□□□ -0.6
MCF2L2-204ENST00000459750 NFKBIBQ15653 356 aa11.31□□□□□ -0.6
MCF2L2-204ENST00000459750 RGPD8O14715 1765 aaPredicted RBP11.31□□□□□ -0.6
MCF2L2-204ENST00000459750 KIF20BQ96Q89 1820 aa11.3□□□□□ -0.6
MCF2L2-204ENST00000459750 ALDH1L2Q3SY69 923 aa11.3□□□□□ -0.6
MCF2L2-204ENST00000459750 IL17REQ8NFR9 667 aa11.3□□□□□ -0.6
MCF2L2-204ENST00000459750 SETD1AO15047 1707 aaKnown RBP11.3□□□□□ -0.6
MCF2L2-204ENST00000459750 EXOC6BQ9Y2D4 811 aa11.3□□□□□ -0.6
MCF2L2-204ENST00000459750 RIMS1Q86UR5 1692 aaKnown RBP11.3□□□□□ -0.6
MCF2L2-204ENST00000459750 CDC42BPGQ6DT37 1551 aa11.29□□□□□ -0.6
MCF2L2-204ENST00000459750 RBM42Q9BTD8 480 aaKnown RBP11.29□□□□□ -0.6
MCF2L2-204ENST00000459750 PHAXQ9H814 394 aaKnown RBP11.29□□□□□ -0.6
MCF2L2-204ENST00000459750 CHL1O00533 1208 aa11.29□□□□□ -0.6
MCF2L2-204ENST00000459750 TAF7LQ5H9L4 462 aa11.29□□□□□ -0.6
MCF2L2-204ENST00000459750 GOLGB1Q14789 3259 aaKnown RBP11.29□□□□□ -0.6
MCF2L2-204ENST00000459750 ADGRB2O60241 1585 aa11.29□□□□□ -0.6
MCF2L2-204ENST00000459750 PRAMEF22A3QJZ6 481 aa11.29□□□□□ -0.6
MCF2L2-204ENST00000459750 CT47B1P0C2W7 299 aaPredicted RBP11.29□□□□□ -0.6
MCF2L2-204ENST00000459750 SIRT1Q96EB6 747 aa11.29□□□□□ -0.6
MCF2L2-204ENST00000459750 AATKQ6ZMQ8 1374 aa11.28□□□□□ -0.6
MCF2L2-204ENST00000459750 AXIN2Q9Y2T1 843 aa11.28□□□□□ -0.6
MCF2L2-204ENST00000459750 REREQ9P2R6 1566 aa11.28□□□□□ -0.6
MCF2L2-204ENST00000459750 CDK12Q9NYV4 1490 aaPredicted RBP11.28□□□□□ -0.6
MCF2L2-204ENST00000459750 C22orf23Q9BZE7 217 aa11.28□□□□□ -0.6
MCF2L2-204ENST00000459750 GNAT3A8MTJ3 354 aa11.27□□□□□ -0.6
MCF2L2-204ENST00000459750 FLT4P35916 1363 aa11.27□□□□□ -0.6
MCF2L2-204ENST00000459750 C3P01024 1663 aa11.27□□□□□ -0.61
MCF2L2-204ENST00000459750 TECPR2O15040 1411 aa11.27□□□□□ -0.61
MCF2L2-204ENST00000459750 AIMP1Q12904 312 aaKnown RBP11.27□□□□□ -0.61
MCF2L2-204ENST00000459750 SMC5Q8IY18 1101 aa11.27□□□□□ -0.61
MCF2L2-204ENST00000459750 STK31Q9BXU1 1019 aa11.27□□□□□ -0.61
MCF2L2-204ENST00000459750 OVOS2A0A0J9YW53 1432 aa11.27□□□□□ -0.61
MCF2L2-204ENST00000459750 OVOS2Q6IE36 1432 aa11.27□□□□□ -0.61
MCF2L2-204ENST00000459750 NUCB1Q02818 461 aa11.27□□□□□ -0.61
MCF2L2-204ENST00000459750 HDAC1Q13547 482 aaPredicted RBP11.27□□□□□ -0.61
MCF2L2-204ENST00000459750 API5Q9BZZ5 524 aaKnown RBP11.27□□□□□ -0.61
MCF2L2-204ENST00000459750 MSH6P52701 1360 aa11.27□□□□□ -0.61
MCF2L2-204ENST00000459750 CSB-PGBD3P0DP91 1061 aa11.26□□□□□ -0.61
MCF2L2-204ENST00000459750 ZNF530Q6P9A1 599 aaPredicted RBP11.26□□□□□ -0.61
MCF2L2-204ENST00000459750 JARID2Q92833 1246 aaPredicted RBP11.26□□□□□ -0.61
MCF2L2-204ENST00000459750 TBC1D2Q9BYX2 928 aa11.26□□□□□ -0.61
MCF2L2-204ENST00000459750 GZF1Q9H116 711 aaPredicted RBP11.26□□□□□ -0.61
MCF2L2-204ENST00000459750 NLRP2Q9NX02 1062 aa11.26□□□□□ -0.61
MCF2L2-204ENST00000459750 USP35Q9P2H5 1018 aa11.26□□□□□ -0.61
MCF2L2-204ENST00000459750 CEP170BQ9Y4F5 1589 aaPredicted RBP11.26□□□□□ -0.61
MCF2L2-204ENST00000459750 MAP4K4O95819 1239 aaPredicted RBP11.26□□□□□ -0.61
MCF2L2-204ENST00000459750 GCP02774 474 aa11.26□□□□□ -0.61
MCF2L2-204ENST00000459750 SLC39A6Q13433 755 aa11.26□□□□□ -0.61
MCF2L2-204ENST00000459750 HDGFL1Q5TGJ6 251 aa11.25□□□□□ -0.61
MCF2L2-204ENST00000459750 IL1RAPL2Q9NP60 686 aa11.25□□□□□ -0.61
MCF2L2-204ENST00000459750 DTNBO60941 627 aa11.24□□□□□ -0.61
MCF2L2-204ENST00000459750 NOL8Q76FK4 1167 aaKnown RBP11.24□□□□□ -0.61
MCF2L2-204ENST00000459750 KRT28Q7Z3Y7 464 aa11.24□□□□□ -0.61
MCF2L2-204ENST00000459750 TTC21AQ8NDW8 1320 aa11.24□□□□□ -0.61
MCF2L2-204ENST00000459750 SBNO1A3KN83 1393 aa11.24□□□□□ -0.61
MCF2L2-204ENST00000459750 TEFQ10587 303 aa11.24□□□□□ -0.61
MCF2L2-204ENST00000459750 GAS2L2Q8NHY3 880 aa11.24□□□□□ -0.61
MCF2L2-204ENST00000459750 FLIIQ13045 1269 aa11.24□□□□□ -0.61
MCF2L2-204ENST00000459750 DIP2AQ14689 1571 aa11.23□□□□□ -0.61
MCF2L2-204ENST00000459750 TBC1D32Q96NH3 1257 aa11.23□□□□□ -0.61
MCF2L2-204ENST00000459750 DNAJC5Q9H3Z4 198 aa11.23□□□□□ -0.61
MCF2L2-204ENST00000459750 ABCC4O15439 1325 aa11.23□□□□□ -0.61
MCF2L2-204ENST00000459750 FER1L4A9Z1Z3 1794 aa11.23□□□□□ -0.61
MCF2L2-204ENST00000459750 PEAK1Q9H792 1746 aa11.23□□□□□ -0.61
MCF2L2-204ENST00000459750 HSP90AA1P07900 732 aaKnown RBP11.23□□□□□ -0.61
MCF2L2-204ENST00000459750 PNMA6EA0A0J9YXQ4 647 aa11.22□□□□□ -0.61
MCF2L2-204ENST00000459750 TPRNQ4KMQ1 711 aa11.22□□□□□ -0.61
MCF2L2-204ENST00000459750 TBC1D9Q6ZT07 1266 aa11.22□□□□□ -0.61
MCF2L2-204ENST00000459750 ANKRD24Q8TF21 1146 aa11.22□□□□□ -0.61
MCF2L2-204ENST00000459750 CHPF2Q9P2E5 772 aa11.22□□□□□ -0.61
MCF2L2-204ENST00000459750 DLG5Q8TDM6 1919 aa11.22□□□□□ -0.61
MCF2L2-204ENST00000459750 IGSF1Q8N6C5 1336 aa11.22□□□□□ -0.61
MCF2L2-204ENST00000459750 A0A0G2JS52 829 aa11.22□□□□□ -0.61
MCF2L2-204ENST00000459750 CEP85Q6P2H3 762 aa11.22□□□□□ -0.61
MCF2L2-204ENST00000459750 LRRFIP2Q9Y608 721 aaKnown RBP11.22□□□□□ -0.61
MCF2L2-204ENST00000459750 ANKRD26Q9UPS8 1709 aa11.22□□□□□ -0.61
MCF2L2-204ENST00000459750 ITSN1Q15811 1721 aa11.22□□□□□ -0.61
MCF2L2-204ENST00000459750 GSPT1P15170 499 aaKnown RBP11.22□□□□□ -0.61
MCF2L2-204ENST00000459750 BECN1Q14457 450 aa11.22□□□□□ -0.61
MCF2L2-204ENST00000459750 CCDC9Q9Y3X0 531 aaKnown RBP11.22□□□□□ -0.61
MCF2L2-204ENST00000459750 CD2BP2O95400 341 aaKnown RBP11.21□□□□□ -0.61
MCF2L2-204ENST00000459750 MYL6BP14649 208 aa11.21□□□□□ -0.61
MCF2L2-204ENST00000459750 TAF7Q15545 349 aaPredicted RBP11.21□□□□□ -0.61
MCF2L2-204ENST00000459750 BTBD11A6QL63 1104 aa11.21□□□□□ -0.62
MCF2L2-204ENST00000459750 ATF3P18847 181 aa11.21□□□□□ -0.62
MCF2L2-204ENST00000459750 RILPL2Q969X0 211 aa11.21□□□□□ -0.62
MCF2L2-204ENST00000459750 PIK3R4Q99570 1358 aa11.2□□□□□ -0.62
MCF2L2-204ENST00000459750 HAP1P54257 671 aaPredicted RBP11.2□□□□□ -0.62
MCF2L2-204ENST00000459750 PROSER3Q2NL68 480 aa11.2□□□□□ -0.62
MCF2L2-204ENST00000459750 FOXD4L5Q5VV16 416 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms