RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 FOXO3O43524 673 aa21.03■□□□□ 0.96
CCDC43-202ENST00000457422 MTHFSDQ2M296 383 aaKnown RBP21.03■□□□□ 0.96
CCDC43-202ENST00000457422 UPF2Q9HAU5 1272 aaKnown RBP21.03■□□□□ 0.96
CCDC43-202ENST00000457422 GAS2L2Q8NHY3 880 aa21.02■□□□□ 0.96
CCDC43-202ENST00000457422 GCC1Q96CN9 775 aa21.02■□□□□ 0.96
CCDC43-202ENST00000457422 C1orf115Q9H7X2 142 aa21.02■□□□□ 0.96
CCDC43-202ENST00000457422 RGS12O14924 1447 aa21.02■□□□□ 0.96
CCDC43-202ENST00000457422 ADGRL3Q9HAR2 1447 aa21.02■□□□□ 0.96
CCDC43-202ENST00000457422 HOXC9P31274 260 aa21.01■□□□□ 0.95
CCDC43-202ENST00000457422 ABTB2Q8N961 1025 aa21.01■□□□□ 0.95
CCDC43-202ENST00000457422 TBC1D32Q96NH3 1257 aa21.01■□□□□ 0.95
CCDC43-202ENST00000457422 RTL1A6NKG5 1358 aa21.01■□□□□ 0.95
CCDC43-202ENST00000457422 PHF8Q9UPP1 1060 aa21.01■□□□□ 0.95
CCDC43-202ENST00000457422 HTATSF1O43719 755 aaKnown RBP21■□□□□ 0.95
CCDC43-202ENST00000457422 RBM33Q96EV2 1170 aaKnown RBP21■□□□□ 0.95
CCDC43-202ENST00000457422 LTN1O94822 1766 aa21■□□□□ 0.95
CCDC43-202ENST00000457422 INTS3Q68E01 1043 aaKnown RBP21■□□□□ 0.95
CCDC43-202ENST00000457422 CHD1LQ86WJ1 897 aa21■□□□□ 0.95
CCDC43-202ENST00000457422 RTF1Q92541 710 aaKnown RBP20.99■□□□□ 0.95
CCDC43-202ENST00000457422 PTPRCP08575 1304 aa20.98■□□□□ 0.95
CCDC43-202ENST00000457422 C14orf37Q86TY3 774 aa20.97■□□□□ 0.95
CCDC43-202ENST00000457422 SIRT2Q8IXJ6 389 aa20.97■□□□□ 0.95
CCDC43-202ENST00000457422 LNPKQ9C0E8 428 aa20.97■□□□□ 0.95
CCDC43-202ENST00000457422 MIS18AQ9NYP9 233 aa20.97■□□□□ 0.95
CCDC43-202ENST00000457422 NFAT5O94916 1531 aa20.97■□□□□ 0.95
CCDC43-202ENST00000457422 PHRF1Q9P1Y6 1649 aaKnown RBP20.96■□□□□ 0.95
CCDC43-202ENST00000457422 TSPYL4Q9UJ04 414 aa20.95■□□□□ 0.94
CCDC43-202ENST00000457422 NPHP4O75161 1426 aaPredicted RBP20.95■□□□□ 0.94
CCDC43-202ENST00000457422 BECN1Q14457 450 aa20.95■□□□□ 0.94
CCDC43-202ENST00000457422 LTV1Q96GA3 475 aaPredicted RBP20.93■□□□□ 0.94
CCDC43-202ENST00000457422 DEKP35659 375 aaKnown RBP20.92■□□□□ 0.94
CCDC43-202ENST00000457422 BMP2KLQ5H9B9 411 aa20.92■□□□□ 0.94
CCDC43-202ENST00000457422 ATP10DQ9P241 1426 aa20.91■□□□□ 0.94
CCDC43-202ENST00000457422 GNAT3A8MTJ3 354 aa20.91■□□□□ 0.94
CCDC43-202ENST00000457422 ESCO1Q5FWF5 840 aa20.91■□□□□ 0.94
CCDC43-202ENST00000457422 ANKRD45Q5TZF3 282 aa20.91■□□□□ 0.94
CCDC43-202ENST00000457422 CACNA1FO60840 1977 aa20.91■□□□□ 0.94
CCDC43-202ENST00000457422 FAM208AQ9UK61 1670 aaKnown RBP20.91■□□□□ 0.94
CCDC43-202ENST00000457422 MAP3K5Q99683 1374 aa20.9■□□□□ 0.94
CCDC43-202ENST00000457422 BABAM1Q9NWV8 329 aa20.9■□□□□ 0.94
CCDC43-202ENST00000457422 IP6K1Q92551 441 aa20.9■□□□□ 0.94
CCDC43-202ENST00000457422 SOS1Q07889 1333 aaPredicted RBP20.9■□□□□ 0.94
CCDC43-202ENST00000457422 MSH6P52701 1360 aa20.89■□□□□ 0.94
CCDC43-202ENST00000457422 SLC4A2P04920 1241 aa20.89■□□□□ 0.93
CCDC43-202ENST00000457422 MFAP1P55081 439 aaKnown RBP20.88■□□□□ 0.93
CCDC43-202ENST00000457422 PSME1Q06323 249 aa20.88■□□□□ 0.93
CCDC43-202ENST00000457422 NFKBIBQ15653 356 aa20.88■□□□□ 0.93
CCDC43-202ENST00000457422 RPAP2Q8IXW5 612 aaPredicted RBP20.88■□□□□ 0.93
CCDC43-202ENST00000457422 USHBP1Q8N6Y0 703 aa20.88■□□□□ 0.93
CCDC43-202ENST00000457422 ANKRD44Q8N8A2 993 aa20.88■□□□□ 0.93
CCDC43-202ENST00000457422 C22orf23Q9BZE7 217 aa20.88■□□□□ 0.93
CCDC43-202ENST00000457422 DCTPP1Q9H773 170 aa20.88■□□□□ 0.93
CCDC43-202ENST00000457422 KCNH5Q8NCM2 988 aa20.87■□□□□ 0.93
CCDC43-202ENST00000457422 SLIT3O75094 1523 aa20.86■□□□□ 0.93
CCDC43-202ENST00000457422 N4BP2Q86UW6 1770 aaPredicted RBP20.85■□□□□ 0.93
CCDC43-202ENST00000457422 G2E3Q7L622 706 aa20.85■□□□□ 0.93
CCDC43-202ENST00000457422 MED1Q15648 1581 aaPredicted RBP20.85■□□□□ 0.93
CCDC43-202ENST00000457422 CEP85Q6P2H3 762 aa20.84■□□□□ 0.93
CCDC43-202ENST00000457422 IL17REQ8NFR9 667 aa20.84■□□□□ 0.93
CCDC43-202ENST00000457422 TRPM3Q9HCF6 1732 aaPredicted RBP20.83■□□□□ 0.93
CCDC43-202ENST00000457422 CCT4P50991 539 aaKnown RBP20.83■□□□□ 0.93
CCDC43-202ENST00000457422 TBC1D2Q9BYX2 928 aa20.83■□□□□ 0.93
CCDC43-202ENST00000457422 CEMIPQ8WUJ3 1361 aa20.83■□□□□ 0.92
CCDC43-202ENST00000457422 TAF7Q15545 349 aaPredicted RBP20.82■□□□□ 0.92
CCDC43-202ENST00000457422 ORAI2Q96SN7 254 aa20.82■□□□□ 0.92
CCDC43-202ENST00000457422 MEIS3Q99687 375 aa20.82■□□□□ 0.92
CCDC43-202ENST00000457422 KIF1AQ12756 1690 aa20.82■□□□□ 0.92
CCDC43-202ENST00000457422 RGPD2P0DJD1 1756 aa20.82■□□□□ 0.92
CCDC43-202ENST00000457422 LMO7Q8WWI1 1683 aa20.82■□□□□ 0.92
CCDC43-202ENST00000457422 ZBTB7CA1YPR0 619 aa20.82■□□□□ 0.92
CCDC43-202ENST00000457422 RBM25P49756 843 aaKnown RBP20.82■□□□□ 0.92
CCDC43-202ENST00000457422 STK31Q9BXU1 1019 aa20.82■□□□□ 0.92
CCDC43-202ENST00000457422 CCDC30Q5VVM6 783 aa20.81■□□□□ 0.92
CCDC43-202ENST00000457422 NBPF6Q5VWK0 638 aa20.81■□□□□ 0.92
CCDC43-202ENST00000457422 NBPF4Q96M43 638 aa20.81■□□□□ 0.92
CCDC43-202ENST00000457422 NCAPD2Q15021 1401 aa20.81■□□□□ 0.92
CCDC43-202ENST00000457422 XPCQ01831 940 aaPredicted RBP20.81■□□□□ 0.92
CCDC43-202ENST00000457422 F6X3S4 739 aa20.8■□□□□ 0.92
CCDC43-202ENST00000457422 CAMTA1Q9Y6Y1 1673 aa20.79■□□□□ 0.92
CCDC43-202ENST00000457422 KDM3BQ7LBC6 1761 aa20.79■□□□□ 0.92
CCDC43-202ENST00000457422 SLC4A10Q6U841 1118 aa20.79■□□□□ 0.92
CCDC43-202ENST00000457422 ANTXR1Q9H6X2 564 aa20.79■□□□□ 0.92
CCDC43-202ENST00000457422 PXDNLA1KZ92 1463 aa20.78■□□□□ 0.92
CCDC43-202ENST00000457422 PLEKHM2Q8IWE5 1019 aa20.78■□□□□ 0.92
CCDC43-202ENST00000457422 MST1RQ04912 1400 aa20.78■□□□□ 0.92
CCDC43-202ENST00000457422 FLIIQ13045 1269 aa20.77■□□□□ 0.92
CCDC43-202ENST00000457422 ARHGEF25Q86VW2 580 aa20.76■□□□□ 0.91
CCDC43-202ENST00000457422 NECTIN2Q92692 538 aa20.76■□□□□ 0.91
CCDC43-202ENST00000457422 LRRC59Q96AG4 307 aaKnown RBP20.76■□□□□ 0.91
CCDC43-202ENST00000457422 GCP02774 474 aa20.76■□□□□ 0.91
CCDC43-202ENST00000457422 PROSER2Q86WR7 435 aaPredicted RBP20.76■□□□□ 0.91
CCDC43-202ENST00000457422 HMMRO75330 724 aa20.75■□□□□ 0.91
CCDC43-202ENST00000457422 TBC1D9Q6ZT07 1266 aa20.75■□□□□ 0.91
CCDC43-202ENST00000457422 SLKQ9H2G2 1235 aaPredicted RBP20.75■□□□□ 0.91
CCDC43-202ENST00000457422 C1orf167Q5SNV9 1468 aa20.75■□□□□ 0.91
CCDC43-202ENST00000457422 PLEKHG5O94827 1062 aa20.74■□□□□ 0.91
CCDC43-202ENST00000457422 GSPT1P15170 499 aaKnown RBP20.74■□□□□ 0.91
CCDC43-202ENST00000457422 EIF5BO60841 1220 aaKnown RBP20.74■□□□□ 0.91
CCDC43-202ENST00000457422 CDC45O75419 566 aa20.73■□□□□ 0.91
CCDC43-202ENST00000457422 FKBP5Q13451 457 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms