RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 KAT6BQ8WYB5 2073 aa11.51□□□□□ -0.57
SP140-207ENST00000456542 TATP17735 454 aaPredicted RBP11.51□□□□□ -0.57
SP140-207ENST00000456542 NHSQ6T4R5 1651 aa11.51□□□□□ -0.57
SP140-207ENST00000456542 RGPD3A6NKT7 1758 aaPredicted RBP11.51□□□□□ -0.57
SP140-207ENST00000456542 RGPD4Q7Z3J3 1758 aa11.51□□□□□ -0.57
SP140-207ENST00000456542 ZCRB1Q8TBF4 217 aaKnown RBP11.5□□□□□ -0.57
SP140-207ENST00000456542 PARD3Q8TEW0 1356 aa11.5□□□□□ -0.57
SP140-207ENST00000456542 COL3A1P02461 1466 aaPredicted RBP11.5□□□□□ -0.57
SP140-207ENST00000456542 TRIM37O94972 964 aa11.49□□□□□ -0.57
SP140-207ENST00000456542 BAG6P46379 1132 aa11.49□□□□□ -0.57
SP140-207ENST00000456542 DDX10Q13206 875 aaKnown RBP11.49□□□□□ -0.57
SP140-207ENST00000456542 KDRP35968 1356 aa11.49□□□□□ -0.57
SP140-207ENST00000456542 IL13P35225 146 aa11.48□□□□□ -0.57
SP140-207ENST00000456542 CNGB1Q14028 1251 aaPredicted RBP11.48□□□□□ -0.57
SP140-207ENST00000456542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.48□□□□□ -0.57
SP140-207ENST00000456542 PCDH11XQ9BZA7 1347 aa11.48□□□□□ -0.57
SP140-207ENST00000456542 PCDH11YQ9BZA8 1340 aa11.48□□□□□ -0.57
SP140-207ENST00000456542 DOT1LQ8TEK3 1739 aa11.48□□□□□ -0.57
SP140-207ENST00000456542 RREB1Q92766 1687 aa11.47□□□□□ -0.57
SP140-207ENST00000456542 DIAPH1O60610 1272 aaKnown RBP11.47□□□□□ -0.57
SP140-207ENST00000456542 PPP2R1AP30153 589 aa11.47□□□□□ -0.57
SP140-207ENST00000456542 DDX54Q8TDD1 881 aaKnown RBP11.47□□□□□ -0.57
SP140-207ENST00000456542 BCL11BQ9C0K0 894 aaPredicted RBP11.47□□□□□ -0.57
SP140-207ENST00000456542 BTAF1O14981 1849 aa11.46□□□□□ -0.57
SP140-207ENST00000456542 DEFB132Q7Z7B7 95 aa11.46□□□□□ -0.57
SP140-207ENST00000456542 CFAP53Q96M91 514 aa11.46□□□□□ -0.57
SP140-207ENST00000456542 SPG7Q9UQ90 795 aa11.46□□□□□ -0.57
SP140-207ENST00000456542 ZNF316A6NFI3 1004 aaPredicted RBP11.45□□□□□ -0.58
SP140-207ENST00000456542 APBA3O96018 575 aa11.45□□□□□ -0.58
SP140-207ENST00000456542 RALBP1Q15311 655 aa11.45□□□□□ -0.58
SP140-207ENST00000456542 ITGB4P16144 1822 aa11.44□□□□□ -0.58
SP140-207ENST00000456542 PLSCR1O15162 318 aa11.44□□□□□ -0.58
SP140-207ENST00000456542 CYP27B1O15528 508 aa11.44□□□□□ -0.58
SP140-207ENST00000456542 EN1Q05925 392 aaPredicted RBP11.44□□□□□ -0.58
SP140-207ENST00000456542 SULT6B1Q6IMI4 303 aa11.44□□□□□ -0.58
SP140-207ENST00000456542 AEBP1Q8IUX7 1158 aa11.44□□□□□ -0.58
SP140-207ENST00000456542 CAMKK2Q96RR4 588 aa11.44□□□□□ -0.58
SP140-207ENST00000456542 NUP188Q5SRE5 1749 aa11.43□□□□□ -0.58
SP140-207ENST00000456542 TOGARAM1Q9Y4F4 1720 aa11.43□□□□□ -0.58
SP140-207ENST00000456542 NKX1-1Q15270 411 aaPredicted RBP11.43□□□□□ -0.58
SP140-207ENST00000456542 AMOTQ4VCS5 1084 aa11.43□□□□□ -0.58
SP140-207ENST00000456542 KCNQ2O43526 872 aa11.42□□□□□ -0.58
SP140-207ENST00000456542 PLEKHO1Q53GL0 409 aaPredicted RBP11.42□□□□□ -0.58
SP140-207ENST00000456542 PTF1AQ7RTS3 328 aa11.42□□□□□ -0.58
SP140-207ENST00000456542 IFNL2Q8IZJ0 200 aa11.42□□□□□ -0.58
SP140-207ENST00000456542 ACSBG1Q96GR2 724 aa11.42□□□□□ -0.58
SP140-207ENST00000456542 NUDCQ9Y266 331 aa11.42□□□□□ -0.58
SP140-207ENST00000456542 PHKG2P15735 406 aa11.41□□□□□ -0.58
SP140-207ENST00000456542 EZH2Q15910 746 aaKnown RBP11.41□□□□□ -0.58
SP140-207ENST00000456542 VIRMAQ69YN4 1812 aaKnown RBP11.41□□□□□ -0.58
SP140-207ENST00000456542 LY75O60449 1722 aa11.4□□□□□ -0.58
SP140-207ENST00000456542 MYBBP1AQ9BQG0 1328 aaKnown RBP11.4□□□□□ -0.58
SP140-207ENST00000456542 U2SURPO15042 1029 aaKnown RBP11.4□□□□□ -0.58
SP140-207ENST00000456542 HSP90AB1P08238 724 aaKnown RBP11.4□□□□□ -0.58
SP140-207ENST00000456542 HMOX1P09601 288 aa11.4□□□□□ -0.58
SP140-207ENST00000456542 PRIM1P49642 420 aaKnown RBP11.4□□□□□ -0.58
SP140-207ENST00000456542 SCN11AQ9UI33 1791 aa11.4□□□□□ -0.58
SP140-207ENST00000456542 ZNF530Q6P9A1 599 aaPredicted RBP11.39□□□□□ -0.59
SP140-207ENST00000456542 SYTL4Q96C24 671 aaPredicted RBP11.39□□□□□ -0.59
SP140-207ENST00000456542 PRKRIP1Q9H875 184 aaPredicted RBP11.39□□□□□ -0.59
SP140-207ENST00000456542 DCAF5Q96JK2 942 aa11.38□□□□□ -0.59
SP140-207ENST00000456542 ADAMTS7Q9UKP4 1686 aa11.38□□□□□ -0.59
SP140-207ENST00000456542 TXNRD1Q16881 649 aa11.37□□□□□ -0.59
SP140-207ENST00000456542 C1orf141Q5JVX7 400 aa11.37□□□□□ -0.59
SP140-207ENST00000456542 PPP4R3CPQ6ZMV5 832 aa11.37□□□□□ -0.59
SP140-207ENST00000456542 KDM6AO15550 1401 aaPredicted RBP11.36□□□□□ -0.59
SP140-207ENST00000456542 PAPPAQ13219 1627 aa11.36□□□□□ -0.59
SP140-207ENST00000456542 FCHSD2O94868 740 aa11.36□□□□□ -0.59
SP140-207ENST00000456542 U2AF1L5P0DN76 240 aaPredicted RBP11.36□□□□□ -0.59
SP140-207ENST00000456542 U2AF1Q01081 240 aaKnown RBP eCLIP11.36□□□□□ -0.59
SP140-207ENST00000456542 AKAP4Q5JQC9 854 aa11.36□□□□□ -0.59
SP140-207ENST00000456542 PROM2Q8N271 834 aa11.36□□□□□ -0.59
SP140-207ENST00000456542 RSPH6AQ9H0K4 717 aa11.36□□□□□ -0.59
SP140-207ENST00000456542 ERVV-2B6SEH9 535 aa11.35□□□□□ -0.59
SP140-207ENST00000456542 PRKAR2BP31323 418 aa11.35□□□□□ -0.59
SP140-207ENST00000456542 MTHFSDQ2M296 383 aaKnown RBP11.35□□□□□ -0.59
SP140-207ENST00000456542 SLC27A3Q5K4L6 730 aa11.35□□□□□ -0.59
SP140-207ENST00000456542 NBPF14Q5TI25 921 aa11.35□□□□□ -0.59
SP140-207ENST00000456542 MPRIPQ6WCQ1 1025 aa11.35□□□□□ -0.59
SP140-207ENST00000456542 MRC1P22897 1456 aa11.35□□□□□ -0.59
SP140-207ENST00000456542 TAF1LQ8IZX4 1826 aa11.35□□□□□ -0.59
SP140-207ENST00000456542 GAS2L2Q8NHY3 880 aa11.34□□□□□ -0.59
SP140-207ENST00000456542 PIGBQ92521 554 aa11.34□□□□□ -0.59
SP140-207ENST00000456542 SMARCC1Q92922 1105 aaPredicted RBP11.34□□□□□ -0.59
SP140-207ENST00000456542 TMOD3Q9NYL9 352 aa11.34□□□□□ -0.59
SP140-207ENST00000456542 ZNF831Q5JPB2 1677 aa11.33□□□□□ -0.6
SP140-207ENST00000456542 PALLDQ8WX93 1383 aa11.33□□□□□ -0.6
SP140-207ENST00000456542 C5P01031 1676 aa11.33□□□□□ -0.6
SP140-207ENST00000456542 DLG5Q8TDM6 1919 aa11.33□□□□□ -0.6
SP140-207ENST00000456542 QSER1Q2KHR3 1735 aa11.32□□□□□ -0.6
SP140-207ENST00000456542 MAP3K5Q99683 1374 aa11.32□□□□□ -0.6
SP140-207ENST00000456542 HMGB2P26583 209 aaKnown RBP11.32□□□□□ -0.6
SP140-207ENST00000456542 CABP4P57796 275 aa11.32□□□□□ -0.6
SP140-207ENST00000456542 PHACTR3Q96KR7 559 aa11.32□□□□□ -0.6
SP140-207ENST00000456542 PNNQ9H307 717 aaKnown RBP11.32□□□□□ -0.6
SP140-207ENST00000456542 SIPA1L3O60292 1781 aaPredicted RBP11.31□□□□□ -0.6
SP140-207ENST00000456542 GNAT3A8MTJ3 354 aa11.31□□□□□ -0.6
SP140-207ENST00000456542 RNMTO43148 476 aaKnown RBP11.31□□□□□ -0.6
SP140-207ENST00000456542 NEFMP07197 916 aa11.31□□□□□ -0.6
SP140-207ENST00000456542 R3HDM1Q15032 1099 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms