RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 MON2Q7Z3U7 1717 aa12.84□□□□□ -0.35
PTCHD1-202ENST00000456522 GTF3C3Q9Y5Q9 886 aa12.83□□□□□ -0.36
PTCHD1-202ENST00000456522 USP6P35125 1406 aa12.82□□□□□ -0.36
PTCHD1-202ENST00000456522 PER1O15534 1290 aaPredicted RBP12.82□□□□□ -0.36
PTCHD1-202ENST00000456522 OSBPP22059 807 aa12.82□□□□□ -0.36
PTCHD1-202ENST00000456522 KRT28Q7Z3Y7 464 aa12.82□□□□□ -0.36
PTCHD1-202ENST00000456522 ROBO1Q9Y6N7 1651 aa12.82□□□□□ -0.36
PTCHD1-202ENST00000456522 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
PTCHD1-202ENST00000456522 CC2D1BQ5T0F9 858 aaKnown RBP12.81□□□□□ -0.36
PTCHD1-202ENST00000456522 NPHP3Q7Z494 1330 aa12.81□□□□□ -0.36
PTCHD1-202ENST00000456522 TTC21BQ7Z4L5 1316 aa12.81□□□□□ -0.36
PTCHD1-202ENST00000456522 NEUROD2Q15784 382 aa12.8□□□□□ -0.36
PTCHD1-202ENST00000456522 UPF1Q92900 1129 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTCHD1-202ENST00000456522 CGNL1Q0VF96 1302 aa12.8□□□□□ -0.36
PTCHD1-202ENST00000456522 KIF20BQ96Q89 1820 aa12.79□□□□□ -0.36
PTCHD1-202ENST00000456522 NRKQ7Z2Y5 1582 aa12.79□□□□□ -0.36
PTCHD1-202ENST00000456522 C3orf67Q6ZVT6 689 aa12.79□□□□□ -0.36
PTCHD1-202ENST00000456522 NME9Q86XW9 330 aa12.79□□□□□ -0.36
PTCHD1-202ENST00000456522 TBC1D12O60347 775 aa12.78□□□□□ -0.36
PTCHD1-202ENST00000456522 GGNBP2Q9H3C7 697 aa12.78□□□□□ -0.36
PTCHD1-202ENST00000456522 NHSL1Q5SYE7 1610 aa12.77□□□□□ -0.36
PTCHD1-202ENST00000456522 TRPM3Q9HCF6 1732 aaPredicted RBP12.77□□□□□ -0.36
PTCHD1-202ENST00000456522 FYB1O15117 783 aa12.77□□□□□ -0.37
PTCHD1-202ENST00000456522 ANP32CO43423 234 aa12.77□□□□□ -0.37
PTCHD1-202ENST00000456522 NUTM2GQ5VZR2 741 aa12.77□□□□□ -0.37
PTCHD1-202ENST00000456522 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.37
PTCHD1-202ENST00000456522 ANO8Q9HCE9 1232 aaPredicted RBP12.77□□□□□ -0.37
PTCHD1-202ENST00000456522 TTC21AQ8NDW8 1320 aa12.77□□□□□ -0.37
PTCHD1-202ENST00000456522 SSH2Q76I76 1423 aa12.77□□□□□ -0.37
PTCHD1-202ENST00000456522 GRXCR2A6NFK2 248 aa12.76□□□□□ -0.37
PTCHD1-202ENST00000456522 EVI5O60447 810 aa12.76□□□□□ -0.37
PTCHD1-202ENST00000456522 ABTB2Q8N961 1025 aa12.76□□□□□ -0.37
PTCHD1-202ENST00000456522 BRD4O60885 1362 aaPredicted RBP12.76□□□□□ -0.37
PTCHD1-202ENST00000456522 PXDNQ92626 1479 aa12.76□□□□□ -0.37
PTCHD1-202ENST00000456522 PIK3C2AO00443 1686 aa12.75□□□□□ -0.37
PTCHD1-202ENST00000456522 PHLPP1O60346 1717 aa12.75□□□□□ -0.37
PTCHD1-202ENST00000456522 MORC1Q86VD1 984 aa12.75□□□□□ -0.37
PTCHD1-202ENST00000456522 ANKRD26Q9UPS8 1709 aa12.74□□□□□ -0.37
PTCHD1-202ENST00000456522 SBNO1A3KN83 1393 aa12.74□□□□□ -0.37
PTCHD1-202ENST00000456522 NSD2O96028 1365 aa12.74□□□□□ -0.37
PTCHD1-202ENST00000456522 NPC1L1Q9UHC9 1359 aa12.74□□□□□ -0.37
PTCHD1-202ENST00000456522 SOS2Q07890 1332 aaPredicted RBP12.74□□□□□ -0.37
PTCHD1-202ENST00000456522 TNNT2P45379 298 aaPredicted RBP12.74□□□□□ -0.37
PTCHD1-202ENST00000456522 COG3Q96JB2 828 aa12.74□□□□□ -0.37
PTCHD1-202ENST00000456522 AHDC1Q5TGY3 1603 aaPredicted RBP12.73□□□□□ -0.37
PTCHD1-202ENST00000456522 TNS3Q68CZ2 1445 aa12.73□□□□□ -0.37
PTCHD1-202ENST00000456522 TRIM66O15016 1216 aa12.73□□□□□ -0.37
PTCHD1-202ENST00000456522 PRKRIP1Q9H875 184 aaPredicted RBP12.73□□□□□ -0.37
PTCHD1-202ENST00000456522 ALS2Q96Q42 1657 aa12.73□□□□□ -0.37
PTCHD1-202ENST00000456522 SPATA31A3Q5VYP0 1347 aa12.72□□□□□ -0.37
PTCHD1-202ENST00000456522 ERICH6Q7L0X2 663 aa12.72□□□□□ -0.37
PTCHD1-202ENST00000456522 KRI1Q8N9T8 703 aaKnown RBP12.72□□□□□ -0.37
PTCHD1-202ENST00000456522 RALBP1Q15311 655 aa12.71□□□□□ -0.37
PTCHD1-202ENST00000456522 NLRP13Q86W25 1043 aa12.71□□□□□ -0.37
PTCHD1-202ENST00000456522 MARF1Q9Y4F3 1742 aaKnown RBP12.71□□□□□ -0.38
PTCHD1-202ENST00000456522 USP31Q70CQ4 1352 aa12.7□□□□□ -0.38
PTCHD1-202ENST00000456522 PARD3Q8TEW0 1356 aa12.7□□□□□ -0.38
PTCHD1-202ENST00000456522 FBLN1P23142 703 aa12.7□□□□□ -0.38
PTCHD1-202ENST00000456522 PRIM1P49642 420 aaKnown RBP12.7□□□□□ -0.38
PTCHD1-202ENST00000456522 MAP2K5Q13163 448 aa12.7□□□□□ -0.38
PTCHD1-202ENST00000456522 DDX12PQ92771 950 aa12.7□□□□□ -0.38
PTCHD1-202ENST00000456522 LRRC59Q96AG4 307 aaKnown RBP12.7□□□□□ -0.38
PTCHD1-202ENST00000456522 OVOS2A0A0J9YW53 1432 aa12.7□□□□□ -0.38
PTCHD1-202ENST00000456522 OVOS2Q6IE36 1432 aa12.7□□□□□ -0.38
PTCHD1-202ENST00000456522 COL16A1Q07092 1604 aaPredicted RBP12.7□□□□□ -0.38
PTCHD1-202ENST00000456522 ARHGEF10O15013 1369 aa12.69□□□□□ -0.38
PTCHD1-202ENST00000456522 HIC1Q14526 733 aa12.69□□□□□ -0.38
PTCHD1-202ENST00000456522 MAP2P11137 1827 aaKnown RBP12.68□□□□□ -0.38
PTCHD1-202ENST00000456522 GNPATO15228 680 aa12.68□□□□□ -0.38
PTCHD1-202ENST00000456522 FCHSD2O94868 740 aa12.68□□□□□ -0.38
PTCHD1-202ENST00000456522 CABLES1Q8TDN4 633 aa12.68□□□□□ -0.38
PTCHD1-202ENST00000456522 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.68□□□□□ -0.38
PTCHD1-202ENST00000456522 DAXXQ9UER7 740 aaPredicted RBP12.68□□□□□ -0.38
PTCHD1-202ENST00000456522 USP54Q70EL1 1684 aa12.67□□□□□ -0.38
PTCHD1-202ENST00000456522 MYBBP1AQ9BQG0 1328 aaKnown RBP12.67□□□□□ -0.38
PTCHD1-202ENST00000456522 ZBTB7CA1YPR0 619 aa12.67□□□□□ -0.38
PTCHD1-202ENST00000456522 PPP2R1AP30153 589 aa12.67□□□□□ -0.38
PTCHD1-202ENST00000456522 HSPA1LP34931 641 aa12.67□□□□□ -0.38
PTCHD1-202ENST00000456522 PDE4DQ08499 809 aa12.67□□□□□ -0.38
PTCHD1-202ENST00000456522 MED1Q15648 1581 aaPredicted RBP12.66□□□□□ -0.38
PTCHD1-202ENST00000456522 PTGDRQ13258 359 aa12.66□□□□□ -0.38
PTCHD1-202ENST00000456522 USP19O94966 1318 aa12.65□□□□□ -0.38
PTCHD1-202ENST00000456522 IRF6O14896 467 aa12.65□□□□□ -0.38
PTCHD1-202ENST00000456522 PPM1GO15355 546 aaPredicted RBP12.65□□□□□ -0.38
PTCHD1-202ENST00000456522 PHF14O94880 888 aa12.65□□□□□ -0.38
PTCHD1-202ENST00000456522 GCP02774 474 aa12.65□□□□□ -0.38
PTCHD1-202ENST00000456522 RRS1Q15050 365 aaKnown RBP12.65□□□□□ -0.38
PTCHD1-202ENST00000456522 PNPLA6Q8IY17 1366 aa12.65□□□□□ -0.38
PTCHD1-202ENST00000456522 PHRF1Q9P1Y6 1649 aaKnown RBP12.65□□□□□ -0.38
PTCHD1-202ENST00000456522 SLIT3O75094 1523 aa12.64□□□□□ -0.39
PTCHD1-202ENST00000456522 MTHFSP49914 203 aa12.64□□□□□ -0.39
PTCHD1-202ENST00000456522 KCNH5Q8NCM2 988 aa12.64□□□□□ -0.39
PTCHD1-202ENST00000456522 EPAS1Q99814 870 aa12.64□□□□□ -0.39
PTCHD1-202ENST00000456522 GPBP1L1Q9HC44 474 aaPredicted RBP12.64□□□□□ -0.39
PTCHD1-202ENST00000456522 EMILIN1Q9Y6C2 1016 aa12.64□□□□□ -0.39
PTCHD1-202ENST00000456522 CRYBG1Q9Y4K1 1723 aa12.64□□□□□ -0.39
PTCHD1-202ENST00000456522 ZC3H6P61129 1189 aaKnown RBP12.63□□□□□ -0.39
PTCHD1-202ENST00000456522 AMHR2Q16671 573 aa12.63□□□□□ -0.39
PTCHD1-202ENST00000456522 CCDC102AQ96A19 550 aa12.63□□□□□ -0.39
PTCHD1-202ENST00000456522 KDM4CQ9H3R0 1056 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms